New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 850440 = | 43 (0.490) | 4 (0.050) | 5/238 | NT | 8.6% | intergenic (‑20/‑785) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
? | NC_002947 | 850461 = | 44 (0.520) | intergenic (‑41/‑764) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
TTGATGAGGTTTAGCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCGTG‑CATGGCAGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/850591‑850440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcATACCCTGCATTGGAAATCGTTT > NC_002947/850461‑850483 TTGATGAGGTTTAGCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTCTCTACCTCCGTACTGTTATTCTTTTCTTAAAAACGATTTCCAATGCAGGGTATGCTTCGTT‑CATGGCAGGAA > 1:862081/1‑150 GATGAGGTTTAGCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTCATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCGTG‑CATGGCAGGAAGC > 1:152096/1‑150 AGGTTTAGCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCCTGCCAT‑GCACGAAGCATAC < 2:663758/150‑1 GCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCCTGCCAT‑GCACGAAGCATACCCTGCAT > 2:891846/1‑150 ATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCCTGCCAT‑GCACGAAGCATACCCTGCATTGGAAATCGTTT < 1:891846/150‑1 GAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTACGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCCTGCCAT‑GCACGAAGCATACCCTGCATTGG < 1:754693/133‑1 GAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCCTGCCAT‑GCACGAAGCATACCCTGCATTGG > 2:754693/1‑133 TTGATGAGGTTTAGCAGCGGTAATGATGAACTGGAATGATGCACACTTACTTGGTGACACACCAACAAGAAGCATTTTTATATTTCAGTTTTGTTAAGCTTATCTTAAAAACGATTTCCAATGCAGGGTATGCTTCGTG‑CATGGCAGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/850591‑850440 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcATACCCTGCATTGGAAATCGTTT > NC_002947/850461‑850483 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |