New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	875925 =	81 (0.920)	4 (0.050)	4/228	NT	5.4%	intergenic (‑31/+56)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
	?	NC_002947	875974 =	65 (0.800)					intergenic (‑80/+7)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY

CCCGGTACGCGTCAACATACTTGGTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/876079‑875925 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgtcatagGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGT  >  NC_002947/875974‑876119                                                                                                                                                                                                                                                                                                               CCCGGTACGCGTCAACATACTTGGTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGT                                                                                                                                                         <  2:444458/150‑1   CGGTACGCGTCAACATACTTGCTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCA                                                                                                                                                       <  1:665891/150‑1                            ACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTC                                                                                                                                                        <  1:1828320/124‑1                            ACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTC                                                                                                                                                        >  2:1828320/1‑124                                                   ACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGT                                                                                                                                                         <  2:988791/100‑1                                                   ACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTGACCCGGGGCGGGGAGGCTGTACGTGT                                                                                                                                                         >  1:988791/1‑100                                                                                                           CTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGC                                                                               <  1:2318002/118‑1                                                                                                           CTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGC                                                                               >  2:2318002/1‑118                                                                                                                    GCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTAT                                                                                                                         >  1:995030/1‑67                                                                                                                    GCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTAT                                                                                                                         <  2:995030/67‑1                                                                                                                                                        ATAGGTCTTGTCAAGCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGT  >  2:1342088/1‑150                                                                                                                                                        ATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGT                                <  1:431874/120‑1                                                                                                                                                        ATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGT                                >  2:431874/1‑120                                                                                                                                                           GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTC                                                                                       >  1:1706542/1‑62                                                                                                                                                           GGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTC                                                                                       <  2:1706542/62‑1                                                                                                                                                                                                                                                                                                               CCCGGTACGCGTCAACATACTTGGTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCACACCTTACCCGGGGCGGGGAGGCTGTACGTGTCATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/876079‑875925 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgtcatagGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGT  >  NC_002947/875974‑876119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.