| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1452353 | 97 (1.100) | 7 (0.080) | 7/238 | NT | 6.6% | coding (508/1542 nt) | PP_1271 | putative Multidrug efflux MFS transporter |
| ? | NC_002947 | = 1452371 | 104 (1.230) | coding (526/1542 nt) | PP_1271 | putative Multidrug efflux MFS transporter | |||||
CTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1452200‑1452353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGGCAAGGCGCCAGCGGCAAAGCCCTGCAG < NC_002947/1452371‑1452227 CTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCC < 2:1420491/150‑1 GCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAA < 1:475739/150‑1 CTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACCCCGCC > 2:445253/1‑150 GCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACCCCGCCAGCGGCG‑TGCCGAGGTTGGG < 1:445253/150‑1 TGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACCCCGCCAGCGGCG‑TGCCGAGGTTGG < 1:737689/90‑1 TGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACCCCGCCAGCGGCG‑TGCCGAGGTTGG > 2:737689/1‑90 GCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCACAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGT < 1:1794711/76‑1 GCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCACAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGT > 2:1794711/1‑76 TGACCGCCACCTTTGGCCCCACCCTCGGCA‑CGCCGCTGGCGGGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGG < 2:712245/106‑1 TGACCGCCACCTTTGGCCCCAACCTCGGCA‑CGCCGCTGGCGGGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGG > 1:712245/1‑106 CAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGGCAAGGCGCCAGCGTCAAAGCCCTGCAG > 2:2243962/1‑150 CAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGGCAAGGCGCCAGCGGCAAAGCCCTGCAG < 2:543109/150‑1 CAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGGCAAGGCGCCAGCGGCAAAGCCCTGCAG > 2:727845/1‑150 CAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGG > 1:2131238/1‑123 CAACCCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGG < 2:2131238/123‑1 CTGCACAGCCTGATGTTGCTGCGCGTACTGCAGGGCTTTGCCGCTGGCGCCTTGCCGCCGATGCTGATGAGCGTGGCCCTGCGCTTTCTGCCGCCAGGTATCAAGGTCTATGGCCTGGCCTGCTACGCCCTGACCGCCACCTTTGGCCCCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1452200‑1452353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccCCGCCAGCGGCG‑TGCCGAGGTTGGGGCCAAAGGTGGCGGTCAGGGCGTAGCAGGCCAGGCCATAGACCTTGATACCTGGCGGCAGAAAGCGCAGGGCCACGCTCATCAGCATCGGCGGCAAGGCGCCAGCGGCAAAGCCCTGCAG < NC_002947/1452371‑1452227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |