| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1531811 | 50 (0.570) | 4 (0.060) | 4/200 | NT | 7.2% | coding (107/630 nt) | PP_1344 | hypothetical protein |
| ? | NC_002947 | = 1531859 | 63 (0.890) | coding (59/630 nt) | PP_1344 | hypothetical protein | |||||
CTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531639‑1531811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgtgccggcctcttcgcgggTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCCCAGCCACCT < NC_002947/1531859‑1531711 gTGCAAGGGCCCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCGGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT < 2:869384/149‑1CTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT > 2:2086699/1‑150 TGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTG > 2:1987564/1‑150 GCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGC > 2:1191056/1‑150 AAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCT < 1:1726432/150‑1 AGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTG > 2:1075995/1‑150 CTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCAGAAGGTGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAACTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCC < 2:1354141/150‑1 CCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGG < 1:1497629/150‑1 CAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGC < 2:2059985/150‑1 GCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTT < 1:1420328/150‑1 GGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCG > 2:1865974/1‑150 CCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGG < 2:185878/150‑1 CAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT > 2:770031/1‑117 CAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT < 1:770031/117‑1 CAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT > 1:1482525/1‑114 CAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTT < 2:1482525/114‑1 GGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC > 1:440383/1‑150 GCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTC < 2:2137282/126‑1 GCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTC > 1:2137282/1‑126 GGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGG < 2:440383/150‑1 GCGGAAGGGGGCTGGGGGGGGGGGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGG < 1:1924154/150‑1 TGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAA < 1:2086699/150‑1 CGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCAC > 2:191453/1‑121 CGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCAC < 1:191453/121‑1 GGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTA < 2:1190478/98‑1 GGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTA > 1:1190478/1‑98 GCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCC > 1:1987564/1‑150 TCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCC > 1:353713/1‑150 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCAT > 1:679569/1‑126 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCAT < 2:679569/126‑1 GCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACT > 1:38558/1‑93 GCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACT < 2:38558/93‑1 GTGAACCCGCTCCTACAAGATACCGATAACGTTGGCAGGAGCGGGTTCCCCAGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCCCAGCCACCT > 1:1010266/1‑150 CTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531639‑1531811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgtgccggcctcttcgcgggTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCCCAGCCACCT < NC_002947/1531859‑1531711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |