New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2078275 = | 65 (0.740) | 8 (0.100) | 3/234 | NT | 10.3% | intergenic (+17/+98) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
? | NC_002947 | 2078372 = | 78 (0.940) | intergenic (+114/+1) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
GGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2078430‑2078275 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACCCCGCTG > NC_002947/2078372‑2078518 GGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACGGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGGCCGGGAAAA > 2:987055/1‑150 GTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACATGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAG > 2:1906958/1‑150 GTGGATGACACGGTGCGCCTGGGCTCACAGTGATCTGTCATTGTCGATGTTGTCTGAACCGGCTTGTCTAGGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAG < 1:987055/150‑1 CCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCAACTCGTCATCCACCCGCTTGCCCAG > 2:988514/1‑150 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACC > 1:2314968/1‑125 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACC < 2:2314968/125‑1 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGT > 1:1883126/1‑120 GCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGT < 2:1883126/120‑1 CCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTTTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT > 2:1640106/1‑150 CCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGCACAGGCAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT > 2:1883927/1‑150 TCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGGTTCAGACAACATCGACAATGAACGATACCTTTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCT < 1:1640106/150‑1 ccctGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACCCCG > 1:1834728/5‑150 CGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACCCCGCTG > 1:299884/1‑150 GGTGGATGACGAGGTGCACCTGGGCGCACAGGTATCGTTCATTGTCGATGTTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCTCCCACAAGGACCCCACTGTCTTCAGGGCTGTGATATCCCTGTGGGTGCGGGCGGGCCCGCGAAAAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2078430‑2078275 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTCACCCTCGCCAATCTTCAACCCCGCTG > NC_002947/2078372‑2078518 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |