| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2562704 = | 81 (0.920) | 4 (0.050) | 4/236 | NT | 5.0% | coding (399/1137 nt) | dauA | FAD‑dependent catabolic D‑arginine dehydrogenase |
| ? | NC_002947 | 2562731 = | 74 (0.880) | coding (426/1137 nt) | dauA | FAD‑dependent catabolic D‑arginine dehydrogenase | |||||
CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2562857‑2562704‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGCC > NC_002947/2562731‑2562879 CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGC > 1:1523924/1‑150CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGC > 2:1825429/1‑150 TGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG < 2:835936/150‑1 AGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTG > 1:2174206/1‑86 AGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTG < 2:2174206/86‑1 ATCGCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATC < 1:2299304/86‑1 ATCGCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATC > 2:2299304/1‑86 cgcGCCTGGTGCGGGGGACCTTGACGTACATGCCTTGCACCAAGGCGTCTTGCGTGGTTATCGCACTGCCGGCGGTAACCTGCGCTGCAACGCCGAGCTTATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGG < 1:611951/147‑1 GCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGTAGGAGTTGGCTGATGGCAG > 2:1246084/1‑150 GCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAG < 1:219233/150‑1 CCAGGTGCGATGGACCTTGACGTACATGCCTTGCACAAAGGCTTCTTGCGTGGTTATAGCACTGCCGCCAGTGAACTGCGCTGCAACGCCGAGCTGATCCGGGCCTGCTACCTGGACGACGTGTGGCAGAGAGAGTTGGCCGATGGCgcc > 2:257730/1‑147 AGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCG > 1:1921097/1‑150 GTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGCC < 2:1921097/150‑1 GTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGCCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGCC > 1:348598/1‑150 CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2562857‑2562704‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGCC > NC_002947/2562731‑2562879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |