| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4523155 = | 73 (0.830) | 6 (0.070) | 5/238 | NT | 7.7% | coding (960/2226 nt) | idh | isocitrate dehydrogenase |
| ? | NC_002947 | 4523187 = | 74 (0.870) | coding (992/2226 nt) | idh | isocitrate dehydrogenase | |||||
GTTCGCCTGCGGCGTTCCACATCTTGCCCGAGTCACGGATCATGGCCGGCATCGAGGCGTCGACGATCACGTCGCTCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4523306‑4523155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAGATGTGGAACGCCGCAGGCGAACTGCAAGACGCCAAGGCCGTGATCCC > NC_002947/4523187‑4523331 GTTCGCCTGCGGCGTTCCACATCTTGCCCGAGTCACGGATCATGGCCGGCATCGAGGCGTCGACGATCACGTCGCTCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCT < 1:1783160/150‑1 GACGATCACGTCGCTCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCTGG < 1:2111080/91‑1 GACGATCACGTCGCTCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCTGG > 2:2111080/1‑91 TCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCT < 1:1503392/75‑1 TCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCT > 2:1503392/1‑75 ACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAGATGTGGAACGCCG > 1:932851/1‑150 GGCTGGGCGCTCTGCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGA > 1:583268/1‑116 GGCTGGGCGCTCTGCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGA < 2:583268/116‑1 GGCTGGGCGCTCTGCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTC < 1:617420/87‑1 GGCTGGGCGCTCTGCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTC > 2:617420/1‑87 GCGTACAGGGCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAGATGTGGAACGCCGCAGGCGAACTGCAAGACGCCAAGG < 2:932851/150‑1 CCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAGATGTGGAACGCCGCAGGCGAACTGCAAGACGCCAAGGCCGTGATCCC < 2:535868/150‑1 GTTCGCCTGCGGCGTTCCACATCTTGCCCGAGTCACGGATCATGGCCGGCATCGAGGCGTCGACGATCACGTCGCTCGGCACGTGCAGGTTGGTGATGCCTTTGTCGGAGTTGACCATGGCCAGGGCTGGGCGCTCTGCGTACAGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4523306‑4523155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAGATGTGGAACGCCGCAGGCGAACTGCAAGACGCCAAGGCCGTGATCCC > NC_002947/4523187‑4523331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |