| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4524527 = | 88 (1.000) | 10 (0.130) | 6/222 | NT | 11.8% | intergenic (+106/‑87) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| ? | NC_002947 | 4524569 = | 71 (0.900) | intergenic (+148/‑45) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein | |||||
GAATTCCTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524688‑4524527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGC > NC_002947/4524569‑4524716 GAATTCCTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGGGGCAAATGAC > 1:1620788/1‑150GAATTCCTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGAC < 1:559130/150‑1 TTCCTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCA > 1:2052479/1‑150 CTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTC > 2:1160039/1‑150 TCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTATGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCG > 2:230043/1‑150 TCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCG > 2:1852724/1‑150 GACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCG > 1:1295279/1‑150 GACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCG > 1:1295303/1‑150 ACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGG < 2:704686/150‑1 ACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTGGCCAGGTCATGAACAGCCCCTTGATGGCGTGTATGGCCCCTGTAGGAGCGGGTTCCCCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGG < 2:656560/150‑1 aCGCGGATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGT > 2:2331296/2‑150 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGA < 1:299591/126‑1 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGA > 2:299591/1‑126 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTC > 1:2086097/1‑124 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTC < 2:2086097/124‑1 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGT > 2:1543452/1‑150 CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGT > 2:2059648/1‑150 GCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGAAAACGGGACCGTACATGAGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCG > 1:406336/1‑150 GAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAG < 1:2059648/150‑1 GGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCCAA < 1:2331296/150‑1 GCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAAC > 1:459933/1‑150 GGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGG > 2:1049819/1‑118 GGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGG < 1:1049819/118‑1 GTGAACCCGCTCCTACAGGGGTCATGCACGCATTTAAGGAGCTGTTCATGCCCTTGCAACCCCACATCACCTTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGC > 1:407785/1‑150 GTGAACCACCTCCGACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGC < 1:1526503/150‑1 GAATTCCTCGACGAAGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4524688‑4524527‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGC > NC_002947/4524569‑4524716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |