| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4583073 | 93 (1.050) | 8 (0.100) | 8/234 | NT | 8.2% | coding (399/3321 nt) | treSB | bifunctional trehalose synthase B/maltokinase |
| ? | NC_002947 | = 4583096 | 92 (1.110) | coding (376/3321 nt) | treSB | bifunctional trehalose synthase B/maltokinase | |||||
AGTTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4582919‑4583073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgc‑‑‑‑cCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGGCACCG < NC_002947/4583096‑4582948 AGTTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGC < 2:744645/150‑1 GTTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCG > 2:1692762/1‑150 TTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGC < 1:1751046/148‑1 TTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGC > 2:1751046/1‑148 GTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGGGTCGAGGAAGATGCTGCGCGTGCCGTCGTACTTGTGGTCGTCGTCCGACCGCACGCAGAAATAGCGCGC‑‑‑‑Cgt > 1:572573/1‑148 TGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGCCTTGCCGCCACGCCAAGCGCGGCAGCAA < 1:1182389/150‑1 GTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTT < 1:961963/150‑1 CAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGCCTTGCCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGA < 1:1149696/123‑1 CAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGCCTTGCCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGA > 2:1149696/1‑123 TTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGC > 1:176927/1‑114 TTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGC < 2:176927/114‑1 GAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑CCGCCACGCCAAGCGCGACAGCAAGGCGCGCGAGTTCTA < 1:770884/102‑1 GAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑CCGCCACGCCAAGCGCGACAGCAAGGCGCGCGAGTTCTA > 2:770884/1‑102 CGCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGG < 1:1722312/150‑1 GCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGAC < 1:392480/59‑1 GCGC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGAC > 2:392480/1‑59 GC‑‑‑‑CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGGCAC > 1:774995/1‑150 CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGGCACCG > 2:1716919/1‑150 CCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGGCACCG > 2:884229/1‑150 AGTTGAGGTCCGGCTGGTGGGAGTAGAACCGGTGCCAGAAGTACTGGCCGGCGACCGGGTCCCAGGTCCAGTTGGACTTCTCGGTGTCGAGGAAGATGATGCGCGTGCCGTCGTACTTCTGGTCGTCGTCCGACCACACGTAGAACTCGCGCGC‑‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4582919‑4583073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgc‑‑‑‑cCGCCACGCCAAGCGCGGCAGCAAGGCGCGCGAGTTCTACGTGTGGTCGGACGACGACCAGAAGTACGACGGCACGCGCATCATCTTCCTCGACACCGAGAAGTCCAACTGGACCTGGGACCCGGTCGCCGGCCAGTACTTCTGGCACCG < NC_002947/4583096‑4582948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |