New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1798193 =	84 (0.950)	5 (0.060)	5/244	NT	5.8%	coding (74/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798250 =	80 (0.920)					coding (131/1128 nt)	lpxB	lipid‑A‑disaccharide synthase

GGCCACGCAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTC  >  NC_002947/1798046‑1798338                                                                                                                                                    |                                                                                                                                                     ggCCACGCAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCAGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGccc                                                                                                                                                    >  1:645756/1‑150 (MQ=255)       gCAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAgg                                                                                                                                              >  2:48298/1‑150 (MQ=255)        cAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑c                                                                                                                                           <  1:5375/150‑1 (MQ=255)        cAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCGCAAGg‑‑c                                                                                                                                           <  2:495267/150‑1 (MQ=255)          acacCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgc                                                                                                                                         <  1:820912/150‑1 (MQ=255)          acacCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgc                                                                                                                                         <  2:1723854/150‑1 (MQ=255)          acacCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgc                                                                                                                                         <  1:1934214/150‑1 (MQ=255)           gtcgggcttttcttcgatcagggtctggatcagcagcttgcggcgcttgagcagttcgcgcaggcgccccagtacctcgactagccccatgacggccaggcgctccatggggaaataggattgcaggccctcggcctCCCTCAAGg‑‑cgcg                                                                                                                                        <  1:588808‑M1/13‑1 (MQ=255)            catcTGAGCTCGATCTGTCCCGTCAGTCGATCCTCGGCTCCGCTCGCGGCATCACGCGCTGATATTGCCCAGCTTTGCGTAGCGCTGGTCGACGCTGAGGCCAATGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgcgc                                                                                                                                       <  2:325578/147‑1 (MQ=255)            acCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgcgc                                                                                                                                       >  2:2123477/1‑150 (MQ=255)            acCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGAAGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgcgc                                                                                                                                       <  1:141649/150‑1 (MQ=255)             cccTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGc‑c                                                                                                                                     >  1:1843894/1‑150 (MQ=255)               cTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAg                                                                                                                                               <  1:1047759/141‑1 (MQ=255)               cTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAg                                                                                                                                               >  2:1047759/1‑141 (MQ=255)                  aGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTAATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CAcccc                                                                                                                                <  2:772239/150‑1 (MQ=255)                    gTCGAGCTGTTCCGTCAGTCGATCCCGAGCTCCGCTCGCCGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGa                                                                                                                              >  2:398337/1‑150 (MQ=255)                     tCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgcgc                                                                                                                                       <  1:1234830/141‑1 (MQ=255)                     tCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGg‑‑cgcgc                                                                                                                                       >  2:1234830/1‑141 (MQ=255)                       gAGCTGTTCCGTCCGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGt                                                                                                                           >  2:921241/1‑150 (MQ=255)                         gCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGc                                                                                                                         <  1:254414/150‑1 (MQ=255)                         gCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGc                                                                                                                         >  1:1145846/1‑150 (MQ=255)                         gCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGc                                                                                                                         >  1:2089067/1‑150 (MQ=255)                           tGTTCCGTCAGTCGATCCTGAGGTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTTCGt                                                                                                                       >  2:1377897/1‑150 (MQ=255)                               ccGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCa                                                                                                                   >  2:854110/1‑150 (MQ=255)                                 gTCAGTCGATCCTGAGCTCCGCTCGCAGCAGCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATc                                                                                                                 >  1:1816575/1‑150 (MQ=255)                                   cAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAATG‑‑CGCGC‑CACCCCGACATGCGTTTCATCgg                                                                                                               <  1:1944004/150‑1 (MQ=255)                                    aGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCggg                                                                                                              <  2:1843894/150‑1 (MQ=255)                                    aGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCggg                                                                                                              <  2:1232299/150‑1 (MQ=255)                                     gTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCgggg                                                                                                             >  1:1281695/1‑150 (MQ=255)                                      tCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGAGTTTCATGGGGGt                                                                                                            >  1:382995/1‑150 (MQ=255)                                        tcagcagcttgcggcgcttgagcagttcgcgcaggcgccccagtacctcgactagccccatgacggccaggcgctccatggggaaataggattgcaggccctcggcctCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTg                                                                                                          >  2:588808‑M1/109‑150 (MQ=255)                                         aTCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTgg                                                                                                         >  2:866204/1‑150 (MQ=255)                                          tCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTggc                                                                                                        >  1:589001/1‑150 (MQ=255)                                          tCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTggc                                                                                                        <  1:48298/150‑1 (MQ=255)                                           gcagcttgcggcgcttgagcagttcgcgcaggcgccccagtacctcgactagccccatgacggccaggcgctccatggggaaataggattgcaggccctcggcctCCATCAAGGGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTgg                                                                                                         >  1:1069556‑M1/106‑150 (MQ=255)                                                gCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGcccc                                                                                                  <  1:1108583/150‑1 (MQ=255)                                                    cGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGa                                                                                              <  2:589001/150‑1 (MQ=255)                                                    cGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGa                                                                                              >  1:88139/1‑150 (MQ=255)                                                     gCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTTAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGAt                                                                                             <  2:1816998/150‑1 (MQ=255)                                                     gCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGAt                                                                                             <  1:854110/150‑1 (MQ=255)                                                         gcgGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                         >  1:301844/1‑150 (MQ=255)                                                          cgGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAgg                                                                                        >  2:515655/1‑150 (MQ=255)                                                             cATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCg                                                                                     >  1:1698691/1‑150 (MQ=255)                                                                 aCGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCgggg                                                                                                             >  2:562786/1‑122 (MQ=255)                                                                 aCGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCgggg                                                                                                             <  1:562786/122‑1 (MQ=255)                                                                 aCGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAggg                                                                                 <  2:1787071/150‑1 (MQ=255)                                                                     gcTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTg                                                                             <  1:921241/150‑1 (MQ=255)                                                                         atatGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAAt                                                                         <  2:997679/150‑1 (MQ=255)                                                                         atatGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAAt                                                                         <  2:301844/150‑1 (MQ=255)                                                                              gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCTGCTGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAt                                                                    <  2:1939392/150‑1 (MQ=255)                                                                              gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAt                                                                    <  2:2089067/150‑1 (MQ=255)                                                                              gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGCCCTGCAATCCTAt                                                                    >  2:753666/1‑150 (MQ=255)                                                                                ccAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAttt                                                                  >  2:1156468/1‑150 (MQ=255)                                                                                   gCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTccc                                                               <  2:1651266/150‑1 (MQ=255)                                                                                     tttGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCa                                                             <  2:452394/150‑1 (MQ=255)                                                                                     tttGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCa                                                             <  2:1281695/150‑1 (MQ=255)                                                                                       tGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATg                                                           <  2:645756/150‑1 (MQ=255)                                                                                         gactagccccatgacggccaggcgctccatggggaaataggattgcaggccctcggcctCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGAt                                                                                             <  1:289915‑M1/55‑1 (MQ=255)                                                                                         gactagccccatgacggccaggcgctccatggggaaataggattgcaggccctcggcctCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGAt                                                                                             >  2:289915‑M1/60‑114 (MQ=255)                                                                                         cGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCGGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                         <  1:398337/150‑1 (MQ=255)                                                                                             gcgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGCTGCGTGTCCTCAAGG‑‑CGTGC‑GAGTCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAgcgc                                                     <  1:41506/150‑1 (MQ=255)                                                                                              cgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATgg                                                          <  1:2112227/144‑1 (MQ=255)                                                                                              cgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATgg                                                          >  2:2112227/1‑144 (MQ=255)                                                                                                cTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTg                                                  >  1:659693/1‑150 (MQ=255)                                                                                                 tGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTAAAGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCCTGGAGCGCCTgg                                                 >  1:1123815/1‑150 (MQ=255)                                                                                                    tCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCggg                                                                                                              >  1:443012/1‑86 (MQ=255)                                                                                                    tCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCggg                                                                                                              <  2:443012/86‑1 (MQ=255)                                                                                                    tCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCg                                              <  1:2123477/150‑1 (MQ=255)                                                                                                      gCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAg                                                                                   <  2:195006/111‑1 (MQ=255)                                                                                                      gCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAg                                                                                   >  1:195006/1‑111 (MQ=255)                                                                                                          gTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGGAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgg                                        >  2:106923/1‑150 (MQ=255)                                                                                                          gTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgg                                        <  1:1181559/150‑1 (MQ=255)                                                                                                            gAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTGAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATGGGGGTTGGCGGCCCCTTGATGCAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTTGCCGTCATgggg                                      >  2:735006/1‑150 (MQ=255)                                                                                                            gAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgggg                                      <  2:1890440/150‑1 (MQ=255)                                                                                                               gCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTa                                   >  1:447351/1‑150 (MQ=255)                                                                                                               gCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CACGAACAAAGCG‑CGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTa                                   >  2:1152519/1‑150 (MQ=255)                                                                                                                    tGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGa                              <  2:659693/150‑1 (MQ=255)                                                                                                                    tGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CACGC‑TACCTTGACGTGGGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCGTATTTCCACATGGGGCGCCTGGCCGTCATGGGGGTAGTAGa                              >  1:1120719/1‑150 (MQ=255)                                                                                                                     ggCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                             <  2:1986577/150‑1 (MQ=255)                                                                                                                     ggCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                             <  2:1546585/150‑1 (MQ=255)                                                                                                                          tatCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                         >  1:987301/1‑85 (MQ=255)                                                                                                                          tatCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                         <  2:987301/85‑1 (MQ=255)                                                                                                                             ctttGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                     <  2:1145846/148‑1 (MQ=255)                                                                                                                             ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                         <  1:90013/114‑1 (MQ=255)                                                                                                                             ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                         >  2:90013/1‑114 (MQ=255)                                                                                                                             ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                     >  2:1089205/1‑150 (MQ=255)                                                                                                                              cTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTgggg                    >  1:899594/1‑150 (MQ=255)                                                                                                                                   ttCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGgc                   >  1:431216/1‑146 (MQ=255)                                                                                                                                   ttCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGgc                   <  2:431216/146‑1 (MQ=255)                                                                                                                                        gCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGcgcg          >  2:1236343/1‑150 (MQ=255)                                                                                                                                                cGTGCCCTCGCGG‑‑GGCGC‑GACCCCGACGTGCGTTTCAGCGGGGTTGGCGGCCCCTTGATGGAGGAAGGGCTTCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTc  <  1:735006/150‑1 (MQ=255)                                                                                                                                                  tGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                     >  1:116328/1‑113 (MQ=255)                                                                                                                                                  tGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                     <  2:116328/113‑1 (MQ=255)                                                                                                                                                  ctCCATCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCGATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                     >  1:2094254‑M1/3‑129 (MQ=255)                                                                                                                                                  ctCCATCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCGATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                     <  2:2094254‑M1/127‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGCCACGCAACACCCTGAGGTCGAGCTGTTCCGTCAGTCGATCCTGAGCTCCGCTCGCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGG‑‑CGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTC  >  NC_002947/1798046‑1798338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.