New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 563908575 (0.850)4 (0.050) 3/238 NT 5.1% coding (126/1320 nt) PP_4950 hypothetical protein
?NC_002947 = 5639112 77 (0.910)coding (153/1320 nt) PP_4950 hypothetical protein

Only 100 of 101 total aligned reads displayed.

CGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCC  >  NC_002947/5638936‑5639234
                                                                                                                                                     |                                                                                                                                                      
cGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGC                                                                                                                                                        <  2:2107356‑M1/150‑1 (MQ=255)
  aTGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCa                                                                                                                                                      >  1:2259433/1‑150 (MQ=255)
      aTTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGcc                                                                                                                                                  >  1:1940134/1‑150 (MQ=255)
       ttCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCg                                                                                                                                                 >  1:378268/1‑150 (MQ=255)
            aggagACGCCTGATGCAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGaa                                                                                                                                            <  2:1624849/150‑1 (MQ=255)
            aggagACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGaa                                                                                                                                            >  2:824119/1‑150 (MQ=255)
             ggagACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAg                                                                                                                                           >  2:131424/1‑150 (MQ=255)
                 aCGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAg                                                                                                                                       <  2:1940134/150‑1 (MQ=255)
                    ccTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgcca                                                                                                                                    >  1:991645/1‑150 (MQ=255)
                     cggatgaAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgccag                                                                                                                                   >  2:1748791/3‑150 (MQ=255)
                           aaGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGC‑cctggctgacttcgccggcctggcgaac                                                                                                                             <  2:883760‑M1/150‑29 (MQ=255)
                             gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgc                                                                                                                                      >  1:2246497/1‑139 (MQ=255)
                             gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAgc                                                                                                                                      <  2:2246497/139‑1 (MQ=255)
                             gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgg                                                                                                                           <  2:2185743‑M2/150‑3 (MQ=255)
                             gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgc                                                                                                                           <  1:1757653‑M2/150‑3 (MQ=255)
                             gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgc                                                                                                                           <  1:2077632‑M2/150‑3 (MQ=255)
                                cGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgca                                                                                                                        <  1:1482523‑M2/150‑6 (MQ=255)
                                 gCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCgctggcctggctgacttcgccggcctggcgcac                                                                                                                       <  2:1325207‑M1/150‑34 (MQ=255)
                                   tttCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACt                                                                                                                     >  1:1537406/1‑150 (MQ=255)
                                       gAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCgg                                                                                                                 >  1:675321/1‑150 (MQ=255)
                                       gAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCgg                                                                                                                 >  1:126552/1‑150 (MQ=255)
                                           cccTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTgg                                                                                                             <  2:2259433/150‑1 (MQ=255)
                                              tGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTgc                                                                                                          >  2:203537/1‑150 (MQ=255)
                                                       aGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGgc                                                                                                 >  2:1458059/1‑150 (MQ=255)
                                                       aGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGgc                                                                                                 <  1:210962/150‑1 (MQ=255)
                                                          tGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGcc                                                                                              <  1:1413264/150‑1 (MQ=255)
                                                            cACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAg                                                                                            <  1:1085232/150‑1 (MQ=255)
                                                             aCGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAgg                                                                                           >  2:2268977/1‑150 (MQ=255)
                                                              cgccgcCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGc                                                                                          <  1:2268977/150‑1 (MQ=255)
                                                               gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                         >  1:859177/1‑150 (MQ=255)
                                                               gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                         >  1:859154/1‑150 (MQ=255)
                                                               gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                         <  1:2234939/150‑1 (MQ=255)
                                                                        cAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcagcag                                                                                <  1:131424/150‑1 (MQ=255)
                                                                          ggcgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGt                                                                              <  2:1482523/150‑1 (MQ=255)
                                                                           gcgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAAGTGCGCCAGGCCgg                                                                                                                                                <  2:2189878/83‑1 (MQ=255)
                                                                           gcgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAAGTGCGCCAGGCCgg                                                                                                                                                >  1:2189878/1‑83 (MQ=255)
                                                                            cgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGa                                                                            <  1:1748791/150‑1 (MQ=255)
                                                                                cgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgca                                                                                                   >  2:1502379‑M1/1‑70 (MQ=255)
                                                                                cgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgca                                                                                                   <  1:1502379‑M1/123‑54 (MQ=255)
                                                                                 gAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTg                                                                       >  1:547184/1‑150 (MQ=255)
                                                                                    cAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAgg                                                                               >  2:915725/1‑139 (MQ=255)
                                                                                    cAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAgg                                                                               <  1:915725/139‑1 (MQ=255)
                                                                                     aGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAg‑cg                                                                  <  1:203537/150‑1 (MQ=255)
                                                                                         cACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGa                                                              <  2:39902/150‑1 (MQ=255)
                                                                                            ccTCGGTTCCAGCAACGAGCAATTGCAGTTCGTGCGTTTCAACCATGGCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGGGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGt                                                           >  2:1153925/1‑150 (MQ=255)
                                                                                            ccTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGt                                                           >  1:641963/1‑150 (MQ=255)
                                                                                              tCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAATGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGc                                                         >  2:882758/1‑150 (MQ=255)
                                                                                                 gTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAAc                                                      <  1:824119/150‑1 (MQ=255)
                                                                                                    aCAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTgg                                                   <  1:957760/150‑1 (MQ=255)
                                                                                                           cGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGa                                                  >  2:364796/1‑144 (MQ=255)
                                                                                                           cGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGa                                                  <  1:364796/144‑1 (MQ=255)
                                                                                                            gAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAg                                           >  2:1855975/1‑150 (MQ=255)
                                                                                                                  tCGCACTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCGGGCGACGTCAGCCAGTACAGCCAGAAACCGCGGCTCGTGCGCGATAGGCGCCAGGCGGAACAGCAGGTAGCCTTGAG‑CGGCGTCGTCCAACTGGAGCGCCAGCGCCTg                                     >  2:199195/1‑150 (MQ=255)
                                                                                                                    gCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGt                                                                                                            >  2:317673/1‑78 (MQ=255)
                                                                                                                    gCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGt                                                                                                            <  1:317673/78‑1 (MQ=255)
                                                                                                                        ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                               >  2:968064/1‑150 (MQ=255)
                                                                                                                        ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                               <  2:1757653/150‑1 (MQ=255)
                                                                                                                        ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                               <  1:409065/150‑1 (MQ=255)
                                                                                                                           gTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcg                            >  1:511229/1‑150 (MQ=255)
                                                                                                                           gTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcg                            >  2:604597/1‑150 (MQ=255)
                                                                                                                            tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcg                                                       <  1:1502379‑M2/123‑71 (MQ=255)
                                                                                                                            tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcg                                                       >  2:1502379‑M2/1‑53 (MQ=255)
                                                                                                                            tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                           >  2:224690/1‑150 (MQ=255)
                                                                                                                            tGCGTTTCAACCATGCCAACGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                           <  2:1537406/150‑1 (MQ=255)
                                                                                                                             tcGTTTCAAACATGCCAAGATGCGCCAGACCGACGAAGTCAGCCAGGCCATCGCGCAACTGCGGCTGGTGCTCGATGGGCGCCAGGCGGAACAGCAGGTGATCTTGAG‑CGGCGACGTGCCACTGGATCGCCAGCGCCTGAACGTTGCGCt                          <  1:1132044/149‑1 (MQ=255)
                                                                                                                               gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGaa                                                                                      >  2:342113/1‑89 (MQ=255)
                                                                                                                               gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGaa                                                                                      <  1:342113/89‑1 (MQ=255)
                                                                                                                               gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGAAGTGCAACTGGATTGCTAGCGCCTGAACGGTGCGCTca                        >  2:1132044/1‑149 (MQ=255)
                                                                                                                                 ttCAACCATGCCAATGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGag                      <  1:882758/150‑1 (MQ=255)
                                                                                                                                    aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCt                                      <  1:791418/131‑1 (MQ=255)
                                                                                                                                    aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCt                                      >  2:791418/1‑131 (MQ=255)
                                                                                                                                    aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcag                   >  1:272326/1‑150 (MQ=255)
                                                                                                                                     aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                  >  2:1562207/1‑150 (MQ=255)
                                                                                                                                     aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                  >  1:1120428/1‑150 (MQ=255)
                                                                                                                                     aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                  >  2:2243801/1‑150 (MQ=255)
                                                                                                                                      ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcag                                                                                   <  2:700/85‑1 (MQ=255)
                                                                                                                                      ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcag                                                                                   >  1:700/1‑85 (MQ=255)
                                                                                                                                      ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCt                 <  2:547184/150‑1 (MQ=255)
                                                                                                                                        aTGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTgc               <  2:272326/150‑1 (MQ=255)
                                                                                                                                         tGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGc                                              >  1:1390722/1‑118 (MQ=255)
                                                                                                                                         tGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGc                                              <  2:1390722/118‑1 (MQ=255)
                                                                                                                                           ccAAGGTGCGCCAGGCCGGCGAAGTCAGCAAGGCCAGCGCACAACGGCGGCTGGGGTGCGATGGGCGCCAGGCGG‑CCACCGTCTTGCCGCGGGTCCGCTACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGcc            >  1:1113545/1‑150 (MQ=255)
                                                                                                                                            cAAGGTGCGCcaggcctggctgacttcgccggcctggcgcaccttg                                                                                                                    <  1:611976‑M1/46‑37 (MQ=255)
                                                                                                                                            cAAGGTGCGCcaggcctggctgacttcgccggcctggcgcaccttg                                                                                                                    >  2:611976‑M1/1‑10 (MQ=255)
                                                                                                                                            cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCTGcgcaccttg                                                                                                                     <  1:611976‑M2/46‑10 (MQ=255)
                                                                                                                                            cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCTGcgcaccttg                                                                                                                     >  2:611976‑M2/1‑37 (MQ=255)
                                                                                                                                            cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                           <  2:1264072/134‑1 (MQ=255)
                                                                                                                                            cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                           >  1:1264072/1‑134 (MQ=255)
                                                                                                                                               ggTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCTAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGAc        <  1:1245354/150‑1 (MQ=255)
                                                                                                                                               ggTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGAc        >  2:1773672/1‑150 (MQ=255)
                                                                                                                                                gTTCGCCAGGCCGGCGAAGTCAGCCAGGC‑‑‑caccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcgtgctt      <  2:883760‑M2/150‑121 (MQ=255)
                                                                                                                                                gTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagc        <  2:1325207‑M2/150‑118 (MQ=255)
                                                                                                                                                 tGCGCgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcg       <  1:1482523‑M1/150‑146 (MQ=255)
                                                                                                                                                  gcgcCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCtt     >  1:852916/1‑150 (MQ=255)
                                                                                                                                                    gcgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcgtgc    <  1:2077632‑M1/150‑149 (MQ=255)
                                                                                                                                                    gcgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcgtgc    <  1:1757653‑M1/150‑149 (MQ=255)
                                                                                                                                                    gcCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGc   <  2:378268/150‑1 (MQ=255)
                                                                                                                                                    ccgctggcctggctgacttcgccggcctggcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcgtgc    <  2:2185743‑M1/149‑149 (MQ=255)
                                                                                                                                                     ccAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGcc  >  1:819862/1‑150 (MQ=255)
                                                                                                                                                     ccAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGcc  >  1:1626803/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
CGATGTATTCGGAGGAGACGCCTGATGAAGCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAG‑CGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCC  >  NC_002947/5638936‑5639234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.