New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1780109 =39 (0.440)19 (0.250) 14/210 NT 34.9% intergenic (+26/+80) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
?NC_002947 1780171 = 38 (0.510)intergenic (+88/+18) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase

GGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGAC  >  NC_002947/1780028‑1780318
                                                                                                                                               |                                                                                                                                                   
ggCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                               >  1:1721869/1‑150 (MQ=255)
 gCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCcgcg                                                                                                                                              >  2:246619/1‑150 (MQ=255)
     gTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAgg                                                                                                                                          >  2:2036621/1‑150 (MQ=255)
       aCTGGGTGGGCTGGATATGAGTGAGGCGAACCTGGGTTGAGTGAAGTAGCCACTAGCGAGGCTCTTCGCGGGACCGCCCTCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAgggg                                                                                                                                        <  1:1687333/150‑1 (MQ=37)
         tGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGtt                                                                                                                                      <  1:246619/150‑1 (MQ=255)
                  tGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCgg                                                                                                                             >  1:691482/1‑150 (MQ=255)
                    gctatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCCAGGCCCTTCGCGGGCTCGCCCGCTACCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTCTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGtt                                                                                                                           <  2:980680/148‑1 (MQ=255)
                       atGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTg                                                                                                                        <  2:1906428/150‑1 (MQ=255)
                         gagtgagGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            <  1:1600986/128‑1 (MQ=255)
                         gagtgagGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            >  2:1600986/1‑128 (MQ=255)
                                gCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCCCAGGCACTCAGCTGTCCTCCAAATCAGCGTTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgc                                                                                                               <  1:2036621/150‑1 (MQ=37)
                                      cTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGGTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGAt                                                                                                                                   <  2:1689269/124‑1 (MQ=255)
                                      cTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGAt                                                                                                                                   >  1:1689269/1‑124 (MQ=255)
                                          gTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgc                                                                                                               <  2:341578/140‑1 (MQ=255)
                                          gTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgc                                                                                                               >  1:341578/1‑140 (MQ=255)
                                              aGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                                                           <  2:1126078/108‑1 (MQ=255)
                                              aGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                                                           >  1:1126078/1‑108 (MQ=255)
                                                tCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTccgcc                                                                                               >  1:1959183/1‑150 (MQ=255)
                                                        aCCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGAt                                                                                       <  2:1003633/150‑1 (MQ=255)
                                                          ccTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATg                                                                                                        >  2:50034/1‑131 (MQ=255)
                                                          ccTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATg                                                                                                        <  1:50034/131‑1 (MQ=255)
                                                             aTCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGt                                                                                                                                       >  2:994532/1‑97 (MQ=255)
                                                             aTCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGt                                                                                                                                       <  1:994532/97‑1 (MQ=255)
                                                                aaGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGa                                                                                        <  2:1935691/141‑1 (MQ=255)
                                                                aaGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGa                                                                                        >  1:1935691/1‑141 (MQ=255)
                                                                 aGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGc                                                                              >  1:463403/1‑150 (MQ=255)
                                                                       ttCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCgg                                                                        >  1:1689543/1‑150 (MQ=255)
                                                                                gcgcCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGGACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAg                                                               <  2:1454684/150‑1 (MQ=255)
                                                                                 CGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGCTGCATGCGGCCAGCGGTGCAACCAGt                                                              >  2:1959183‑M1/1‑150 (MQ=255)
                                                                                  gcccgctcccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGc                                                                                                                               <  1:1652514‑M2/23‑1 (MQ=255)
                                                                                  gcccgctcccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGc                                                                                                                               >  2:1652514‑M2/62‑84 (MQ=255)
                                                                                  gcccgctcccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTcc                                                                                                  <  2:467473‑M2/52‑1 (MQ=255)
                                                                                  gcccgctcccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTcc                                                                                                  >  1:467473‑M2/62‑113 (MQ=255)
                                                                                    CCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCACCGGTTTTGCAGGAAGGCGCGACTGCGCTCCGCCGCTTCGCTGCCCTCGGCCCGCGGTGCACCcagtccc                                                           <  2:760514‑M1/150‑4 (MQ=255)
                                                                                      GCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGAt                                                                                       >  2:687811‑M1/1‑120 (MQ=255)
                                                                                      GCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGAt                                                                                       <  1:687811‑M1/120‑1 (MQ=255)
                                                                                          ccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgc                                                       <  1:468709‑M2/95‑1 (MQ=255)
                                                                                          ccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgc                                                       >  2:468709‑M2/54‑148 (MQ=255)
                                                                                          ccacaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgCGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                     >  2:763358‑M2/54‑150 (MQ=255)
                                                                                          CCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                     <  2:2225772‑M1/150‑1 (MQ=255)
                                                                                          CCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                     <  2:2128091‑M1/150‑1 (MQ=255)
                                                                                          CCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                     <  1:2252483‑M1/150‑1 (MQ=255)
                                                                                          CCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATgcgc                                                     <  1:1730531‑M1/150‑1 (MQ=255)
                                                                                            acaggtacagcgctgatttcaagcgcagcgcagtacctgtgtgagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                                                                                             <  1:953409‑M2/41‑1 (MQ=255)
                                                                                            acaggtacagcgctgatttcaagcgcagcgcagtacctgtgtgagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                                                                                             >  2:953409‑M2/52‑92 (MQ=255)
                                                                                            acaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGa                                                                                                                   >  1:712634‑M2/52‑86 (MQ=255)
                                                                                            acaggtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGa                                                                                                                   <  2:712634‑M2/35‑1 (MQ=255)
                                                                                                gtacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACgcgc                                               >  1:2126808‑M2/48‑150 (MQ=255)
                                                                                                GTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCAGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACgcgc                                               <  1:797852‑M1/150‑1 (MQ=255)
                                                                                                 tacagcgctgatttcaagcgcagcgcagtacctgtgggggcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCg                                                                                <  1:1430867‑M2/70‑1 (MQ=255)
                                                                                                 tacagcgctgatttcaagcgcagcgcagtacctgtgggggcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCg                                                                                >  2:1430867‑M2/47‑116 (MQ=255)
                                                                                                 tacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                                                                                             >  1:2079353‑M2/47‑87 (MQ=255)
                                                                                                 tacagcgctgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                                                                                             <  2:2079353‑M2/41‑1 (MQ=255)
                                                                                                  ACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGccc                                             <  1:1552725‑M1/150‑1 (MQ=255)
                                                                                                    tgcgctgcgcTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCgg                                           >  1:816154/1‑150 (MQ=255)
                                                                                                         tgcgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCa                                                                                    >  2:772515/1‑104 (MQ=255)
                                                                                                         tgcgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCa                                                                                    <  1:772515/104‑1 (MQ=255)
                                                                                                         tgatttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCAccc                                      >  2:1277459‑M2/39‑150 (MQ=255)
                                                                                                           cgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTc                                                                                          >  2:257183/1‑96 (MQ=255)
                                                                                                           cgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTc                                                                                          <  1:257183/96‑1 (MQ=255)
                                                                                                           cgctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCgg                                    <  2:1721869/150‑1 (MQ=255)
                                                                                                           atttcaagcgcagcgcagtacctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCgg                                    >  1:622350‑M2/37‑150 (MQ=255)
                                                                                                            tttcaagcgcagcgcagtacctgtgggagcgggcgCGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCggg                                   <  1:763358‑M2/115‑1 (MQ=255)
                                                                                                             ctTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGt                                  >  1:2195959/1‑150 (MQ=255)
                                                                                                              ttGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGtt                                 >  2:1425853/1‑150 (MQ=255)
                                                                                                                 aaaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAc                              <  2:691482/150‑1 (MQ=255)
                                                                                                                  aaTCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCAcc                             >  2:690837/1‑150 (MQ=255)
                                                                                                                         gcTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCa                      >  2:2042494/1‑150 (MQ=255)
                                                                                                                              acctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCa                 <  2:2195959‑M2/133‑1 (MQ=255)
                                                                                                                               cctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCg                                            <  1:1731498‑M2/106‑1 (MQ=255)
                                                                                                                               cctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCg                                            >  2:1731498‑M2/17‑122 (MQ=255)
                                                                                                                               cctgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAc                <  2:2126808‑M2/134‑1 (MQ=255)
                                                                                                                                 tgtgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgc              >  1:1335584‑M2/15‑150 (MQ=255)
                                                                                                                                 tgtgggagcgggcgTGCCAGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCAcgc              <  2:797852‑M2/136‑1 (MQ=255)
                                                                                                                                   tgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGc                                                                          <  2:1382186‑M2/76‑1 (MQ=255)
                                                                                                                                   tgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGc                                                                          >  1:1382186‑M2/13‑88 (MQ=255)
                                                                                                                                   tgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCAc                     <  1:1385094‑M2/129‑1 (MQ=255)
                                                                                                                                   tgggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCAc                     >  2:1385094‑M2/13‑141 (MQ=255)
                                                                                                                                    gggagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGAc           <  1:2128091‑M2/139‑1 (MQ=255)
                                                                                                                                      gagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAg         >  2:585962‑M2/10‑150 (MQ=255)
                                                                                                                                      gagcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAg         >  2:546098‑M2/10‑150 (MQ=255)
                                                                                                                                       agcgggcgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAgg        >  1:1009917‑M2/9‑150 (MQ=255)
                                                                                                                                             cgTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGAc  <  1:1425853‑M2/148‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTGCAACCAGTGCCATGCGCACGCGCCCGGCACCCGGGTTCACCCCATCCACTTCACGCGACAGGTACGAC  >  NC_002947/1780028‑1780318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.