New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4957603 =115 (1.300)5 (0.060) 5/218 NT 5.2% intergenic (‑41/+122) fliH/fliG flagellar assembly protein FliH/flagellar motor switch protein
?NC_002947 4957693 = 83 (1.070)intergenic (‑131/+32) fliH/fliG flagellar assembly protein FliH/flagellar motor switch protein

Only 100 of 124 total aligned reads displayed.

GTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGC  >  NC_002947/4957545‑4957842
                                                                                                                                                     |                                                                                                                                                     
gcaagggcgccgaggaaatgatctaaggtattcgcgatcccatagccgacgccgccttTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACa‑aaa                                                                                                                                                      <  2:1521479‑M1/92‑1 (MQ=255)
  gtTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAgg                                                                                                                                                    <  2:118393/150‑1 (MQ=255)
  gtTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAgg                                                                                                                                                    >  1:2193703/1‑150 (MQ=255)
   ttCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAggc                                                                                                                                                   <  2:1633298/150‑1 (MQ=255)
    tCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAggcg                                                                                                                                                  <  2:903675/150‑1 (MQ=255)
    gggcgccgaggaaatgatctaaggtattcgcgatcccatagccgacgccgccttTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAggcg                                                                                                                                                  >  1:1521479‑M1/55‑150 (MQ=255)
     cTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAggcgg                                                                                                                                                 >  2:40546/1‑150 (MQ=255)
         ggtggGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTc                                                                                                                                             <  1:436459/150‑1 (MQ=255)
                aTGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTATACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATg                                                                                                                                      <  2:1646540/150‑1 (MQ=255)
                aTGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATg                                                                                                                                      <  1:16223/150‑1 (MQ=255)
                 tGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATgg                                                                                                                                     <  1:357267/150‑1 (MQ=255)
                 caagaacATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGGTCACCCGCGAATGCGTCGTCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATgg                                                                                                                                     >  2:935560/7‑150 (MQ=255)
                   cTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTa                                                                                                                                        <  2:489127/145‑1 (MQ=255)
                    tGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGAt                                                                                                                                  >  2:275454/1‑150 (MQ=255)
                     gTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCCGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATc                                                                                                                                 <  1:1942379/150‑1 (MQ=255)
                      tCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATcg                                                                                                                                >  2:1650604/1‑150 (MQ=255)
                       cATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATcgc                                                                                                                               <  1:1636804/150‑1 (MQ=255)
                       cATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATcgc                                                                                                                               <  1:363022/150‑1 (MQ=255)
                              tcAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATcgc                                                                                                                               <  2:391604/143‑1 (MQ=255)
                              tcAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATcgc                                                                                                                               >  1:391604/1‑143 (MQ=255)
                              tcAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATAcc                                                                                                                        >  2:1170194/1‑150 (MQ=255)
                                aaaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCtt                                                                                                                      >  1:102883/1‑150 (MQ=255)
                                aaaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCtt                                                                                                                      >  2:239514/1‑150 (MQ=255)
                                 aaCCGTGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCACTTCTAGC‑ACAGGCGGCTTCAGCGCGAGTTTCGCGAATACCTTa                                                                                                                     >  2:122054/1‑150 (MQ=255)
                                 aaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAg                                                                                                                                                     >  2:1964915/1‑118 (MQ=255)
                                 aaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTa                                                                                                                     <  1:606794/150‑1 (MQ=255)
                                 aaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTa                                                                                                                     >  2:606794/1‑150 (MQ=255)
                                    cATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGAt                                                                                                                  >  1:1477762/1‑150 (MQ=255)
                                      tGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCa                                                                                                                >  1:1950641/1‑150 (MQ=255)
                                         tCGGCCGACCCGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCAttt                                                                                                             <  2:18177/150‑1 (MQ=255)
                                            gCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCt                                                                                                          >  1:867525/1‑150 (MQ=255)
                                              cGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCg                                                                                                        >  1:2171686/1‑150 (MQ=255)
                                              cGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCg                                                                                                        <  2:2195102/150‑1 (MQ=255)
                                              cGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCg                                                                                                        <  1:40546/150‑1 (MQ=255)
                                                acacGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGgc                                                                                                      <  1:842372/150‑1 (MQ=255)
                                                 cacGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGgcg                                                                                                     >  1:1691830/1‑150 (MQ=255)
                                                 cacGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCT‑CAACATCATCGTCGCGGCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGgcg                                                                                                     >  2:1814271/1‑150 (MQ=255)
                                                  acGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCt                                                                                                                       >  2:96182/1‑131 (MQ=255)
                                                  acGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCt                                                                                                                       <  1:96182/131‑1 (MQ=255)
                                                   cGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGcc                                                                                                   <  1:1688456/150‑1 (MQ=255)
                                                    ggTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTAt                                                                                                                                       >  2:1508772/1‑113 (MQ=255)
                                                    ggTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGa                                                                                                                   <  2:1908021/133‑1 (MQ=255)
                                                    ggTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGa                                                                                                                   >  1:1908021/1‑133 (MQ=255)
                                                     cgccttttgtaggagcgggtttacccgcgaaggcgtcggtcctggcaatcgaggttgtcgctgccgacgcattcgcgggtgaacccgctcctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGccc                                                                                                  >  1:1521479‑M2/97‑150 (MQ=255)
                                                        ccTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAg                                                                                                                                                     <  1:115498/95‑1 (MQ=255)
                                                         ttttgtaggagcgggtttacccgcgaaggcgtcggtcctggcaatcgaggttgtcgctgccgacgcattcgcgggtgaacccgctcctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTgc                                                                                              <  2:1521479‑M2/58‑1 (MQ=255)
                                                          TTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGt                                                                                                                                              <  2:43101‑M1/100‑1 (MQ=255)
                                                          TTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGt                                                                                                                                              >  1:43101‑M1/1‑100 (MQ=255)
                                                          TTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTgccg                                                                                            <  2:2227221‑M1/150‑1 (MQ=255)
                                                            GTAGGAGGGGTTCCACCCGCGAACGAGTCGGGAACGACAACCGTGAATGCCAGGACCGACGTCTGCGCGTGTAAACCCGTTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTgccgcc                                                                                          >  2:413792‑M1/1‑150 (MQ=255)
                                                              AGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGAAGCCCCTGCCGCCGa                                                                                        <  2:879184‑M1/150‑1 (MQ=255)
                                                                GAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGc                                                                                      <  1:377836‑M1/150‑1 (MQ=255)
                                                                  GCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTCGACAACGTCCTCGGCGCCCTTGCCGCCGAGCAc                                                                                    >  1:1814271‑M1/1‑150 (MQ=255)
                                                                    GGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGa                                                                                  >  1:1799692‑M1/1‑150 (MQ=255)
                                                                     GGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGAt                                                                                 >  1:1598797‑M1/1‑150 (MQ=255)
                                                                      GTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGAtc                                                                                <  2:2130618‑M1/150‑1 (MQ=255)
                                                                           cccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGcc                                                                           >  2:1376404/1‑150 (MQ=255)
                                                                            ccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCtt                                                                                                                      <  1:2185881/106‑1 (MQ=255)
                                                                            ccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCtt                                                                                                                      >  2:2185881/1‑106 (MQ=255)
                                                                            ccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          >  2:1425678/1‑150 (MQ=255)
                                                                            ccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          >  2:1445340/1‑150 (MQ=255)
                                                                            ccGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          <  2:1832422/150‑1 (MQ=255)
                                                                             ccgcgaaggcgtcggtcctggcaatcgaggttgtcgctgccgacgcattcgcgggtgaacccgctcctacaaGGGACCGTGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          >  1:1440437‑M2/73‑150 (MQ=255)
                                                                                  aTGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCg                                                                    <  1:781018/150‑1 (MQ=255)
                                                                                     gcgtcggtcctggcaatcgaggttgtcgctgccgacgcattcgcgggtgaacccgctcctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGccc                                                                                                  <  1:973144‑M2/54‑1 (MQ=255)
                                                                                      gTCGGCAGCGACGACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCa                                                                >  1:2193638/1‑150 (MQ=255)
                                                                                          gCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCAt                                                               >  1:1130864/1‑147 (MQ=255)
                                                                                          gCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCAt                                                               <  2:1130864/147‑1 (MQ=255)
                                                                                              cGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATc                                                                                                                                 >  1:1416721/1‑77 (MQ=255)
                                                                                              cGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATc                                                                                                                                 <  2:1416721/77‑1 (MQ=255)
                                                                                               gACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCt                                                                                                                       <  1:637187/86‑1 (MQ=255)
                                                                                               gACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCt                                                                                                                       >  2:637187/1‑86 (MQ=255)
                                                                                                    ccTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTgccg                                                                                            <  1:613217/108‑1 (MQ=255)
                                                                                                    ccTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCATTgccg                                                                                            >  2:613217/1‑108 (MQ=255)
                                                                                                     cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          <  1:101666/125‑1 (MQ=255)
                                                                                                     cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCg                                                                          >  2:101666/1‑125 (MQ=255)
                                                                                                     cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATgg                                                 >  2:784170/1‑150 (MQ=255)
                                                                                                     cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATgg                                                 <  1:1376404/150‑1 (MQ=255)
                                                                                                     cTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATgg                                                 >  1:484199/1‑150 (MQ=255)
                                                                                                          ttGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTc                                                                                                            >  1:288589/1‑86 (MQ=255)
                                                                                                          ttGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTc                                                                                                            <  2:288589/86‑1 (MQ=255)
                                                                                                             ccAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtt                                         >  1:1992664/1‑150 (MQ=255)
                                                                                                             ccAGGACCGACGACTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtt                                         >  2:1154060/1‑150 (MQ=255)
                                                                                                              cAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAttt                                        >  1:1926932/1‑150 (MQ=255)
                                                                                                               aGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATGATGTCCTCGGCGCCCTTGCAGCAGAGGATGATCTGTCCGGCCTCTGCCATGCGCCGGGCAATGGTGAGGAtttc                                       >  1:1685288/1‑150 (MQ=255)
                                                                                                                   ccGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAtttctttc                                   >  1:2242102/1‑150 (MQ=255)
                                                                                                                     gACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTg                                 >  2:2231896/1‑150 (MQ=255)
                                                                                                                      aCGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGCCAATGGTGAGGATTTCTTTCTgc                                >  1:289864/1‑150 (MQ=255)
                                                                                                                       cGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTgcg                               <  1:1170194/150‑1 (MQ=255)
                                                                                                                            tCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGtt                          <  2:1992664/150‑1 (MQ=255)
                                                                                                                                gggTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCa                      <  1:1650604/150‑1 (MQ=255)
                                                                                                                                 ggTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATttctttct                                  <  1:1678456/137‑1 (MQ=255)
                                                                                                                                 ggTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATttctttct                                  >  2:1678456/1‑137 (MQ=255)
                                                                                                                                   tAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATAGTATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGt                   >  1:776581/1‑150 (MQ=255)
                                                                                                                                        cccgctcctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCt               <  2:2193638‑M2/137‑1 (MQ=255)
                                                                                                                                         ccgctcctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTg              >  1:51443‑M2/13‑150 (MQ=255)
                                                                                                                                               ctacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGt        >  2:1177898‑M2/7‑150 (MQ=255)
                                                                                                                                                tacaaAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTa       <  2:1477762‑M2/145‑1 (MQ=255)
                                                                                                                                                    aAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCgg   <  2:2242102‑M2/149‑1 (MQ=255)
                                                                                                                                                     aaGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGAGTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGc  <  1:2231896/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACA‑AAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGAGCACGATCTCGCCGGCCTCGGCCATGCGCCGGGCAATGGTGAGGATTTCTTTCTGCGCGGTTTCCACGTCGCTGACCCGTACCGGC  >  NC_002947/4957545‑4957842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.