New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 559417055 (0.620)7 (0.100) 6/192 NT 11.6% intergenic (‑66/+79) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase
?NC_002947 = 5594207 64 (0.940)intergenic (‑103/+42) PP_4921/thiC NCS1 family transporter/phosphomethylpyrimidine synthase

GATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTC  >  NC_002947/5594060‑5594356
                                                                                                                                                   |                                                                                                                                                     
gATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGGGAAGTGCGGCAAAGCCGGTGCCATGCACCGCAGCGCTTGCtt                                                                                                                                                     <  1:21663‑M2/150‑3 (MQ=255)
  tGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGTGCTTGCttcg                                                                                                                                                   >  1:2161848‑M2/1‑146 (MQ=255)
   ggggATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgc                                                                                                                                                  >  2:244034‑M2/1‑145 (MQ=255)
           gATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagc                                                                                                                                          <  2:1990514‑M2/150‑14 (MQ=255)
                         aaCTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacaggg                                                                                                                            <  1:620362‑M2/150‑28 (MQ=255)
                            tggctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCGTACACCACACTGTGGGAGCGGGCTTGTCAGCGAAGACCGGCAAAGCCGGGGCCATGCACCGCAGTGCTTGCTTCGCGTGCAAGCCCGCTCCCACAGGGTac                                                                                                                         >  2:568261/1‑149 (MQ=255)
                            tggctggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTaa                                                                                                                         >  2:2115052/1‑150 (MQ=255)
                                tggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGtg                                                                                                                     >  2:577079/1‑150 (MQ=255)
                                tggGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGtg                                                                                                                     >  2:1443974/1‑150 (MQ=255)
                                    tGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGtgctgc                                                                                                                 >  1:1328157/1‑150 (MQ=255)
                                        gtcatggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgg                                                                                                                                                >  2:894561‑M2/1‑108 (MQ=255)
                                        gtcatggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgg                                                                                                                                                <  1:894561‑M2/115‑8 (MQ=255)
                                          catggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTa                                                                                                           <  2:414876/150‑1 (MQ=255)
                                           atggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcg                                                                                                                                                 >  1:1207990‑M2/1‑105 (MQ=255)
                                           atggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcg                                                                                                                                                 <  2:1207990‑M2/111‑7 (MQ=255)
                                           atggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAg                                                                                                          >  1:2294008/1‑150 (MQ=255)
                                               ccatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAAGACCCGCACAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACtt                                                                                                      <  2:221025/149‑1 (MQ=255)
                                                    tCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTgg                                                                                                 >  1:1865639/1‑150 (MQ=255)
                                                    tCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTgg                                                                                                 >  2:676497/1‑150 (MQ=255)
                                                    tCCGCAGGAGTGATGTTAACTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCCAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTgg                                                                                                 <  1:184924/150‑1 (MQ=255)
                                                          ggAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgc                                                                                           <  1:2115052/150‑1 (MQ=255)
                                                              tGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACCGGGGAAGGGTCGTCGGTTTAGCCTTTGTGGTACAgctggc                                                                                       >  2:186007/1‑150 (MQ=25)
                                                              tGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggc                                                                                       >  1:1594693/1‑150 (MQ=255)
                                                               gATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGTTGACCACTAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGCAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                                                                      <  1:1895654/150‑1 (MQ=37)
                                                               gATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggct                                                                                      <  1:1443974/150‑1 (MQ=255)
                                                                aTGTTAAGTGGCATCCACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggctg                                                                                     <  1:186007/150‑1 (MQ=255)
                                                                aTGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggctg                                                                                     >  2:1861852/1‑150 (MQ=255)
                                                                aTGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggctg                                                                                     <  2:1865639/150‑1 (MQ=255)
                                                                  gTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgt                                                                                                   >  1:2074280/1‑134 (MQ=255)
                                                                  gTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtgt                                                                                                   <  2:2074280/134‑1 (MQ=255)
                                                                   ttAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCt                                                                                  >  2:258598/1‑150 (MQ=255)
                                                                      aGTGGCATACACCACCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCCTGCTTCGCGGGCAAGCCCGCTACCACAAGATAAGGGGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTcc                                                                               >  1:1907366/1‑150 (MQ=25)
                                                                       gTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcggg                                                                                                                                               >  1:2149062‑M2/1‑77 (MQ=255)
                                                                       gTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcggg                                                                                                                                               <  2:2149062‑M2/85‑9 (MQ=255)
                                                                        tGGCATACACCACCCTGGGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGGGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCGTCCTg                                                                             >  2:1899662/1‑150 (MQ=255)
                                                                          gCATCCACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                                                                           >  2:217089/1‑150 (MQ=255)
                                                                          gCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                                                                           <  2:2189661/150‑1 (MQ=255)
                                                                          gCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTAGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                                                                           <  2:2294008/150‑1 (MQ=255)
                                                                            aTACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCgg                                                                         >  1:82543/1‑150 (MQ=255)
                                                                              acacCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGaa                                                                       >  1:418495/1‑150 (MQ=255)
                                                                                    cccTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCACAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTc                                                                 <  1:1661240/150‑1 (MQ=255)
                                                                                     ccTGTGGGAGCGGGCTTGCCCGCGAACACCGTCAAAGCCGGTGCCATGCCCCGCAGTGCTTGCTTCGCGGGCACGCCCGCTCCCACAGGGTACGGTGCTGCGGTTTAGACCCTGTGGTACAGCTGGCTGCTTTCCTTGGGGAACCGCTct                                                                >  2:452937/1‑149 (MQ=21)
                                                                                      cTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCgg                                                               >  1:975241/1‑150 (MQ=255)
                                                                                                gggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgg                                                                                                                                                >  2:15508‑M2/1‑52 (MQ=255)
                                                                                                gggCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgg                                                                                                                                                <  1:15508‑M2/59‑8 (MQ=255)
                                                                                                   cTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCAt                                                  <  2:1328157/150‑1 (MQ=255)
                                                                                                    ttGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgcggacatgaccatgacatcacccagccagttctctcccgaccatcca                                                 <  1:1383939‑M2/150‑103 (MQ=255)
                                                                                                    ttGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcc                                                                                                                                         >  1:2049050‑M2/1‑48 (MQ=255)
                                                                                                    ttGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcc                                                                                                                                         <  2:2049050‑M2/62‑15 (MQ=255)
                                                                                                       cccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                                                                           <  1:573360/121‑1 (MQ=255)
                                                                                                       cccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGc                                                                           >  2:573360/1‑121 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgcggacatga                                                                                       >  2:1399133‑M2/1‑44 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgcggacatga                                                                                       <  1:1399133‑M2/108‑65 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgc                                                                                               <  1:793083‑M2/100‑57 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgc                                                                                               >  2:793083‑M2/1‑44 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCtt                                             >  2:1513648/1‑150 (MQ=255)
                                                                                                        ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGCTTAg                                                                                                          >  2:145375/1‑89 (MQ=255)
                                                                                                           cgAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgcggacatgaccatgacatcacccagccagttctctcccgaccatccaatcc                                             <  2:1939590‑M2/147‑107 (MQ=255)
                                                                                                           cgAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCttcgcgggcaagcccgctcccacagggtggtgtatgccacttaacatcactcctgcggacatgaccatgacagcacccagccagttctctcccgaccatccaatcc                                             >  1:1939590‑M2/1‑41 (MQ=255)
                                                                                                           cgAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCt                                          <  1:1990514/150‑1 (MQ=255)
                                                                                                            gAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTc                                         >  1:1319362/1‑150 (MQ=255)
                                                                                                               cacCGGCAAAGCCAGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGAc                                      >  1:1636635/1‑150 (MQ=255)
                                                                                                                acCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGAcc                                     >  2:11205/1‑150 (MQ=255)
                                                                                                                acCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGATGCGGTTTAGACTTtgt                                                                                                   <  2:972306/88‑1 (MQ=255)
                                                                                                                acCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGATGCGGTTTAGACTTtgt                                                                                                   >  1:972306/1‑88 (MQ=255)
                                                                                                                acCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCACCCAGGGTAAGGTGCAGCGGGGGAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGAcc                                     >  1:2036746/1‑150 (MQ=39)
                                                                                                                  cGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGt                                   >  2:436211/1‑150 (MQ=255)
                                                                                                                   ggCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCg                                                                >  1:1278699/1‑120 (MQ=255)
                                                                                                                   ggCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCg                                                                <  2:1278699/120‑1 (MQ=255)
                                                                                                                    gCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTca                                 >  2:1351766/1‑150 (MQ=255)
                                                                                                                      aaaGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTcaca                               >  2:1893061/1‑150 (MQ=255)
                                                                                                                          ccGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCa                           >  1:478705/1‑150 (MQ=255)
                                                                                                                           cGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCAc                          <  1:436211/150‑1 (MQ=255)
                                                                                                                            ggTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCCCGACCGTCACATCCACg                         <  2:82543/150‑1 (MQ=255)
                                                                                                                             gTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACgg                        >  2:1948232/1‑150 (MQ=255)
                                                                                                                                ccATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCt                                                         >  2:902998/1‑114 (MQ=255)
                                                                                                                                ccATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCt                                                         <  1:902998/114‑1 (MQ=255)
                                                                                                                                 cATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTc                    <  1:217089/150‑1 (MQ=255)
                                                                                                                                    gCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGAt                 <  2:620362/150‑1 (MQ=255)
                                                                                                                                    gCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGAt                 <  2:418495/150‑1 (MQ=255)
                                                                                                                                     cACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATc                <  1:676497/150‑1 (MQ=255)
                                                                                                                                      aCCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCt               >  2:256264/1‑150 (MQ=255)
                                                                                                                                       ccGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCtt              <  1:577079/150‑1 (MQ=255)
                                                                                                                                         gCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTTCTGCGGTGTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTgg            >  1:52566/1‑150 (MQ=255)
                                                                                                                                          cAGTGCTTGCTCCGCGGGCACGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCATTACTGGCGGACCCCCTCGGTAAGCTGACCCACTTCTTGCGCGTCCGTCACATCCACGGCCTCGATCTTGGc           <  1:406617/150‑1 (MQ=255)
                                                                                                                                           aGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCa          <  1:385707/150‑1 (MQ=255)
                                                                                                                                             tgcttgctTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGCCCGTCACATCCACGGCCTCGATCTTGGCAGc        >  1:1507311/1‑150 (MQ=255)
                                                                                                                                              gcttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCg       >  1:682513/1‑150 (MQ=255)
                                                                                                                                               cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtg                                                                                                    <  1:1458917/56‑1 (MQ=255)
                                                                                                                                               cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTtg                                                                                                    >  2:1458917/1‑56 (MQ=255)
                                                                                                                                               cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCAc                                                      >  1:688381/1‑102 (MQ=255)
                                                                                                                                               cttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCAc                                                      <  2:688381/102‑1 (MQ=255)
                                                                                                                                               cttgcttCGCGGGCAAGCCCGCTCCCACAAGGTAAGGTGCTGCAGATAAGGCTTTGTGGTACAGCTGGCTGCCTTCCTGTCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGt      >  2:565971/1‑150 (MQ=255)
                                                                                                                                                ttgcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTa     <  1:1893061/150‑1 (MQ=255)
                                                                                                                                                  gcttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACt   >  1:646699/1‑150 (MQ=255)
                                                                                                                                                   cttCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTAGGACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTc  >  2:2321347/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGGCGGAACCGCTCGGCCTGCTCACGCATGCCTTGCTCGACCGTCACATCCACGGCCTCGATCTTGGCAGCGTACTC  >  NC_002947/5594060‑5594356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.