| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 118,131 | A→T | 5.9% | intergenic (‑47/+18) | metQ ← / ← metI | methionine ABC transporter substrate‑binding protein/ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 118,131 | 0 | A | T | 5.9% | 310.2 / 10.2 | 101 | intergenic (‑47/+18) | metQ/metI | methionine ABC transporter substrate‑binding protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (45/50); new base T (2/4); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.58e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CTCGGCGTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGATAGCCAG > NC_002947/117989‑118280 | ctgggCGTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGAc > 1:2332502/4‑150 (MQ=255) tcGGCGTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGAcc > 2:404889/1‑150 (MQ=255) ggCGTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCTGGCCGAcccg < 2:1391541/150‑2 (MQ=255) gTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCTGGCCGAcccgttc < 2:791855/150‑5 (MQ=255) tGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTg < 1:431022/150‑1 (MQ=255) cGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCTGGCCGAcccgttcggg < 1:83102/150‑8 (MQ=255) cGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTggg < 1:1652365/150‑1 (MQ=255) ggCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTgggg > 2:1050880/1‑150 (MQ=255) cACCGGGGTGGCGGCGACGGTACGGGCACCGGACTGGCTTGAAGGCGCCGCGACTGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGtt < 2:1778486/150‑1 (MQ=255) cGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTAtt < 1:2119378/150‑1 (MQ=255) ggTGGCGGCGACGGTAAGGGTATCGGCCTGGGCC‑AGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACg < 1:1858003/150‑1 (MQ=255) tGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACgg > 1:1972356/1‑150 (MQ=255) tGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACgg < 2:1972356/150‑1 (MQ=255) cgACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGaaaaa > 2:1638026/1‑150 (MQ=255) ggTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCa < 1:1050880/150‑1 (MQ=255) gTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCAc < 2:620545/150‑1 (MQ=255) tAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACg > 1:1208679/1‑150 (MQ=255) gggTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTgg > 2:1151539/1‑123 (MQ=255) gggTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTgg < 1:1151539/123‑1 (MQ=255) gggTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGAcc > 1:2290313/1‑150 (MQ=255) gTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAg > 1:2204339/1‑150 (MQ=255) tATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGt < 2:757356/150‑1 (MQ=255) tCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTggg < 1:886498/119‑1 (MQ=255) tCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTggg > 2:886498/1‑119 (MQ=255) tCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGttt < 1:1182740/150‑1 (MQ=255) cGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTg > 2:104823/1‑150 (MQ=255) gCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCAACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTc > 1:1313831/1‑150 (MQ=255) tGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGcc < 1:1967681/150‑1 (MQ=255) gCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTggg < 2:1080412/110‑1 (MQ=255) gCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTggg > 1:1080412/1‑110 (MQ=255) ccGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCTGGCCGAccc > 1:283383/1‑102 (MQ=255) ccGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCTGGCCGAccc < 2:283383/102‑1 (MQ=255) ccGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACg > 2:338400/1‑150 (MQ=255) gagaAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGct > 2:593728/1‑150 (MQ=255) agaAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGctc < 2:2081268/150‑1 (MQ=255) agaAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGctc > 1:665569/1‑150 (MQ=255) gaAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGctct < 2:2332502/150‑1 (MQ=255) ggCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGGCCCCATTGGGGTTATTTCCGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCa < 2:574538/150‑1 (MQ=255) ggCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACgg < 1:704428/113‑1 (MQ=255) ggCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACgg > 2:704428/1‑113 (MQ=255) gCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAg < 2:2283749/150‑1 (MQ=255) gCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAg > 2:1691574/1‑150 (MQ=255) cgcgACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGa < 1:1691574/150‑1 (MQ=255) aCAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACtt > 1:620401/1‑149 (MQ=255) aCAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACtt < 2:620401/149‑1 (MQ=255) aGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGttt > 2:922982/1‑124 (MQ=255) aGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGttt < 1:922982/124‑1 (MQ=255) aGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGaa > 1:1232861/1‑150 (MQ=255) ggCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATg < 1:643407/109‑1 (MQ=255) ggCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATg > 2:643407/1‑109 (MQ=255) ggCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCa < 1:593728/150‑1 (MQ=255) gACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACca > 1:2312942/1‑150 (MQ=255) agcaagcaGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACcagca < 1:104823/150‑1 (MQ=255) agcaagcaGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACcagca > 1:1177934/1‑150 (MQ=255) aagcaGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGCCCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACcagcagca < 1:1096737/150‑1 (MQ=255) cagcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTgggg < 2:175194/76‑1 (MQ=255) cagcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTgggg > 1:175194/1‑76 (MQ=255) agcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAAc < 1:2087996/132‑1 (MQ=255) agcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAAc > 2:2087996/1‑132 (MQ=255) agcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTAc < 1:338400/150‑1 (MQ=255) gcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGa < 1:881741/124‑1 (MQ=255) gcTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGa > 2:881741/1‑124 (MQ=255) cttcATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACgg < 2:665569/150‑1 (MQ=255) ttcATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGt > 2:57903/1‑150 (MQ=255) ttcATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGt > 2:1618334/1‑150 (MQ=255) cATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACAAGTACCAGCAGCAGTACCACGGTCa < 1:661613/150‑1 (MQ=255) cATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCAATTACACATATCCTGGTGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCa < 1:404889/150‑1 (MQ=255) aTTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCAc < 2:1208679/150‑1 (MQ=255) ttGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTGCCAGCAGCAGTACCACGGTCACt > 2:946485/1‑150 (MQ=255) ttGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACt > 1:1764048/1‑150 (MQ=255) tGATCACTCCTTGTGAGGGCCGCAACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTa < 2:1313831/150‑1 (MQ=255) gATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTGCCAGCAGCAGTACCACGGTCACTAc < 1:946485/150‑1 (MQ=255) aTCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTAcc > 1:845590/1‑150 (MQ=255) aCTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCa > 1:2126734/1‑118 (MQ=255) aCTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCa < 2:2126734/118‑1 (MQ=255) aCTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATc < 2:845590/150‑1 (MQ=255) aCTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATc > 1:1426719/1‑150 (MQ=255) ttcgAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCg > 2:2183013/4‑150 (MQ=255) aGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCt > 1:2124370/1‑150 (MQ=255) aGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCt < 2:1351823/150‑1 (MQ=255) gggCCGCGACGGCCCCCGAACGGGCGGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTg > 1:1822062/1‑150 (MQ=255) ccGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGaa > 2:129165/1‑150 (MQ=255) gcgACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGt > 2:369628/1‑104 (MQ=255) gcgACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGt < 1:369628/104‑1 (MQ=255) gACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACAAGTTAGTCAGCCACGCTCTGCATGACTTTAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGc < 1:283453/150‑1 (MQ=255) ccccGAACGGGTCGGCCAGGCCGACCCCATTGGGGCTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTaa > 2:1131008/1‑150 (MQ=255) cccGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACACAGGTCTGGAAACGCTGGTAAc > 1:394330/1‑150 (MQ=255) ccGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAAcc > 2:2207135/1‑150 (MQ=255) ccGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAAcc > 2:713699/1‑150 (MQ=255) caatggggTCGGCCTGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCg > 1:1673007/6‑150 (MQ=255) aCGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAg < 1:1638026/150‑1 (MQ=255) cGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGc < 2:1764048/150‑1 (MQ=255) cGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGc < 2:2204339/150‑1 (MQ=255) cGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGc < 1:129165/150‑1 (MQ=255) gTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGa < 2:2290313/150‑1 (MQ=255) tCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGAt > 1:312495/1‑150 (MQ=255) tCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGAt < 2:1232861/150‑1 (MQ=255) tCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGAt < 2:312495/150‑1 (MQ=255) cGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGATa < 2:1426719/150‑1 (MQ=255) aGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGATAGCCAg < 2:1177934/150‑1 (MQ=255) | CTCGGCGTGCGGCACCGGGGTGGCGGCGACGGTAAGGGTATCGGCCTGGGCCGAGAAGGCCGCGACAGCGGCAGCGACAGCAAGCAGCTTCTTCATTGATCACTCCTTGTGAGGGCCGCGACGGCCCCCGAACGGGTCGGCCAGGCCGACCCCATTGGGGTTATTTACGGGAAAAATGCACGACCAGTTTGTCGCCCACGCTCTGCAGGACTTGAACCAGTACCAGCAGCAGTACCACGGTCACTACCATCACATCGGTCTGGAAACGCTGGTAACCGAAGCGGATAGCCAG > NC_002947/117989‑118280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |