Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 146,128 | T→A | 7.4% | intergenic (+33/‑115) | gltP → / → PP_0138 | glutamate/aspartate‑proton DAACS transporter/membrane protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 146,128 | 0 | T | A | 7.4% | 321.0 / 14.5 | 109 | intergenic (+33/‑115) | gltP/PP_0138 | glutamate/aspartate‑proton DAACS transporter/membrane protein |
Reads supporting (aligned to +/- strand): ref base T (50/50); new base A (5/3); total (56/53) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 |
Only 100 of 112 total aligned reads displayed.
TTGGTCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCTGGT > NC_002947/145979‑146277 | ttGGTCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACtt > 2:737475/1‑150 (MQ=255) ggTCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGACAGGTGTTTGACCAAGAGCCCCGACTTGt < 1:1229524/150‑1 (MQ=255) gTCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTc < 1:401266/150‑1 (MQ=255) tCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCg > 2:269147/1‑150 (MQ=255) cATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCgg < 1:374878/150‑1 (MQ=255) cATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCgg < 2:781204/150‑1 (MQ=255) cATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCgg < 1:269147/150‑1 (MQ=255) aTTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCggg > 1:1014693/1‑150 (MQ=255) tGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGt > 2:1032147/1‑150 (MQ=255) gggAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCgg > 1:1921413/1‑139 (MQ=255) gggAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGtt < 1:775154/150‑1 (MQ=255) gAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTAt < 1:196232/150‑1 (MQ=255) gCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGc > 2:1236549/1‑150 (MQ=255) aTGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCga < 1:1236549/150‑1 (MQ=255) acgacgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATc < 1:2084015/150‑1 (MQ=255) acgacgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATc < 1:737475/150‑1 (MQ=255) gacgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGCCGCACGAGACGAAACGAGCGGTGGGGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCtt > 1:44938/1‑150 (MQ=255) gacgCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCtt > 1:2312075/1‑150 (MQ=255) gTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtcttg > 2:799298/1‑123 (MQ=255) gTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACAAGTCGGGGCtcttg < 1:799298/127‑2 (MQ=255) cAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGGAGTGGTTGGAGTAACCGCCAAGGGGTGCGAATCACGATTGTATTATCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGATCcgcg > 1:531629/1‑150 (MQ=255) gCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGt < 1:889897/109‑1 (MQ=255) gCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGt > 2:889897/1‑109 (MQ=255) cGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACa > 1:2020468/1‑150 (MQ=255) gAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCACAAGTGCTGTTTGACCAAGAGCCCCGTCTGATGGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACaa > 1:522704/1‑150 (MQ=255) aGCAGTACTGCGCCTCGCTGATGGCCGAGAAGCAGGGAGCGGTAGGGGTTGGCGAAACCGCCAAGCGCTGAGCTTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACaaa < 2:715690/150‑1 (MQ=255) gCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAg > 1:1560216/1‑150 (MQ=255) gCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAg < 1:2093067/150‑1 (MQ=255) gCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAg > 1:114971/1‑150 (MQ=255) aGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGa > 1:1485305/1‑133 (MQ=255) aGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGa < 2:1485305/133‑1 (MQ=255) aGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACaaatgc > 1:2161359/1‑147 (MQ=255) ctacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTcgc < 1:1032147/150‑1 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGGGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCGGGTTGACCAAGAGCCCCGCCTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTcgcg > 1:1809779/1‑150 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTa < 2:966563/138‑1 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTa > 1:966563/1‑138 (MQ=255) tacGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTcgcg > 2:1443802/1‑150 (MQ=255) gCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATc < 1:1246789/150‑1 (MQ=255) cTCGCTGATGGCCGGGTAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGTCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc > 2:1504130/1‑150 (MQ=255) cTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGc > 1:2292477/1‑150 (MQ=255) tCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGcc > 1:177524/1‑150 (MQ=255) cGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCa > 2:1569032/1‑150 (MQ=255) tGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAg < 1:321823/133‑1 (MQ=255) tGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAg > 2:321823/1‑133 (MQ=255) tGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGa > 1:742116/1‑141 (MQ=255) gCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAgg > 2:746487/1‑150 (MQ=255) aaGCATGGAGCTGTAGTGGTTGGCGAAACCTCCAATCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGa < 1:277770/150‑1 (MQ=255) gggAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGc > 2:458012/1‑150 (MQ=255) ggAGCTGTAGTGGTTGGCGAACCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACCAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCt > 2:745595/1‑150 (MQ=255) gAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCGTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCta < 2:531629/150‑1 (MQ=255) tGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCAGCATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCtattat > 1:2301511/1‑150 (MQ=255) tAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTc < 1:758742/150‑1 (MQ=255) gTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGc < 1:1348597/68‑1 (MQ=255) gTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGc > 2:1348597/1‑68 (MQ=255) tGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCggg > 2:509868/1‑150 (MQ=255) tGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCg > 1:1825605/1‑148 (MQ=255) tGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCg < 2:1825605/148‑1 (MQ=255) gcttGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGc > 2:677364/3‑150 (MQ=255) gTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCa > 2:177873/1‑150 (MQ=255) gTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCa > 1:1365177/1‑150 (MQ=255) gTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTAAAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCa > 2:1580027/1‑150 (MQ=255) ttGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTCGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCAc > 1:673544/1‑150 (MQ=255) ggCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAAAGCCCCGACAAGTCGGGGCtc < 2:1351022/64‑2 (MQ=25) aaCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAg < 1:799898/150‑1 (MQ=255) aCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAgg < 2:1929929/150‑1 (MQ=255) aCCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAgg < 1:1678209/150‑1 (MQ=255) cGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAgggg < 1:677364/150‑1 (MQ=255) gCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAggggg > 1:1991041/1‑150 (MQ=255) ccAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGa < 2:1991041/150‑1 (MQ=255) cAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAATGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 2:2161359/150‑1 (MQ=255) cAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGTGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 1:1455432/150‑1 (MQ=255) gcTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGGCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATAc < 1:746487/150‑1 (MQ=255) tGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCATAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACgg > 1:1091907/1‑150 (MQ=255) tGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACgg > 1:1774372/1‑150 (MQ=255) tGAGCCTGATGGATGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACgg < 2:114971/150‑1 (MQ=255) ccTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGc > 1:807597/1‑150 (MQ=255) tGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTc < 1:1443802/150‑1 (MQ=255) aTGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGAt < 2:919199/144‑1 (MQ=255) aTGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGAt > 1:919199/1‑144 (MQ=255) tGGCTGTTTGAAAACACGCCCCGACATGCCGGGGCTCTTCGTTATCTGCCAGATCATGAGCCGCGCCTACAAAGGCTTGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCacg < 1:1504130/150‑3 (MQ=255) agagCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCgg > 1:1406119/1‑150 (MQ=255) agagCCCCGACTTGTCGGGGCTTTTCGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCgg < 2:673544/150‑1 (MQ=255) aaagCCCCGACAAGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCgg > 2:213773/3‑150 (MQ=255) gagCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCATAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGc < 2:1091907/150‑1 (MQ=255) gagCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGc > 2:2100664/1‑150 (MQ=255) agCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCt < 2:268933/150‑1 (MQ=255) agCCCCGACAAGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCt > 1:507852/1‑150 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTGCGAGCTCTTGAGCCCCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCttt > 1:45562/1‑150 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa < 1:596793/116‑1 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGaa > 2:596793/1‑116 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTTGCTCGGCt > 2:2171548/1‑148 (MQ=255) ccccGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCt < 1:2171548/148‑1 (MQ=255) ccGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCttttt > 2:1417172/1‑150 (MQ=255) aCTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAggg > 2:744321/1‑107 (MQ=255) aCTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCt < 2:1560216/150‑1 (MQ=255) aCTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCt < 1:1569032/150‑1 (MQ=255) cTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATTGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCtg < 1:41353/150‑1 (MQ=255) cTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCtg < 2:1774372/150‑1 (MQ=255) tGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCTATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCtggt < 1:1083410/150‑1 (MQ=255) tGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCtggt < 1:177873/150‑1 (MQ=255) | TTGGTCATTGCTCGCTGGGAAGGCATGTACGACGCGGTCAAGGGCGAGCAGTACTACGCCTCGCTGATGGCCGAGAAGCAGGGAGCTGTAGTGGTTGGCGAAACCGCCAAGCGCTGAGCCTGATGGCTGTTTGACCAAGAGCCCCGACTTGTCGGGGCTTTTTGTTATCTGCGAGATCTTGAGCCGCGCCTACAAAGGCTCGCGATCGCCAGTCACAGGCTGCGATACGCTATTATTCGGGCACTTTTCAGGGGGAACATACGGATGCTCAACGGCCTTTGGCTCGGCTTTTTCCTGGT > NC_002947/145979‑146277 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |