| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,189,041 | A→G | 7.3% | intergenic (+25/+17) | PP_1038 → / ← tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,189,041 | 0 | A | G | 7.3% | 309.5 / 10.6 | 110 | intergenic (+25/+17) | PP_1038/tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| Reads supporting (aligned to +/- strand): ref base A (44/58); new base G (5/3); total (49/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.32e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GGAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCA > NC_002947/1188893‑1189188 | ggAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCAc < 1:232929/150‑1 (MQ=255) agagTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGcc < 2:1167669/150‑1 (MQ=255) agTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCGATTCGCGGGCACGCCcg > 1:622867/1‑150 (MQ=255) gTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGCCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCGCGCCGAGTTCGAGAACGCATCACGGCTATTCGCGGGCACGCCcgc < 1:706596/150‑1 (MQ=255) ggAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGACTATTCGCGGGCACGCCCGCGa > 2:1922422/1‑150 (MQ=255) aaGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGaaa < 1:1019279/150‑1 (MQ=255) ggTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAgg < 2:1403212/150‑1 (MQ=255) gggAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGc < 1:1068252/149‑1 (MQ=255) gagaTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGccc < 2:323870/150‑1 (MQ=255) gAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGccc < 2:1990767/150‑1 (MQ=255) gCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTa < 1:420020/150‑1 (MQ=255) ggtggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACaa < 1:1221867/150‑1 (MQ=255) gggggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGATCAAGCAGGGCCACCCTTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGACACGCCCGCGAAAGGGCCCTACaa < 2:931957/147‑1 (MQ=255) ggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATcc < 1:2192763/150‑1 (MQ=255) ggtggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATcc < 2:2125692/150‑1 (MQ=255) ggCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGc < 1:1259266/150‑1 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGccc < 2:200352/136‑1 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGccc > 1:200352/1‑136 (MQ=255) tGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCcac > 1:758678/1‑150 (MQ=255) gAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCTACCCGTACGAGACGCCAGCCTATGAAGCCTTGCGGCTCGCCGAGTTCTGGAATGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGACATACAAACCAACCACAAtc > 1:1917265/1‑150 (MQ=255) gAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTAc < 2:1424825/135‑1 (MQ=255) tGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCt > 1:911188/1‑150 (MQ=255) tGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCt > 2:550258/1‑150 (MQ=255) gATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCtt > 2:1014679/1‑150 (MQ=255) aTTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGc > 1:895301/1‑112 (MQ=255) aTTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGc < 2:895301/112‑1 (MQ=255) ttGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGc < 1:2308183/150‑1 (MQ=255) gtgCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCt < 1:550258/150‑1 (MQ=255) tgCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTg < 2:1781816/150‑1 (MQ=255) tgCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTACTTGCCTg > 2:2150989/1‑150 (MQ=255) cAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGc < 1:1782310/150‑1 (MQ=255) gtcgtcGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTcc > 2:1115763/1‑150 (MQ=255) gtcgCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTgg > 1:95579/1‑143 (MQ=255) gtcgCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTgg < 2:95579/143‑1 (MQ=255) gCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCGCCGGCCGc > 2:800698/1‑150 (MQ=255) cTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGCCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCt > 2:808464/1‑150 (MQ=255) gcTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCaa > 1:2081860/1‑150 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGAACACCCGCTGTGGCGCTTGACAATCAAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa > 2:1815256/1‑150 (MQ=255) tCAAGCAGAGCCACCCGTACGAGACGCAAGCGTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACa > 1:1815787/1‑150 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACAtt > 1:315910/1‑150 (MQ=255) aaGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGACTGGCGGCTCGCCGAGTTCTAGAACGAATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGACCTACAATCCAGCCACAACCTCCTTGCCTGGCTCCGGCCGCTTCAACCtt > 2:1066232/1‑150 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTTGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 2:315910/150‑1 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 2:1544177/150‑1 (MQ=255) aGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGACTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 1:1922422/150‑1 (MQ=255) gCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTcc < 1:703052/150‑1 (MQ=255) gCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTcc > 2:703052/1‑150 (MQ=255) cAGAGCCACCGGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCca < 2:524289/150‑1 (MQ=255) agagCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCATGGCTCCGGCCGCTTCAACATTCcac > 1:1648142/1‑150 (MQ=255) cACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACAt < 1:1908987/140‑1 (MQ=255) cACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACAt > 2:1908987/1‑140 (MQ=255) cACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGcc > 1:1703567/1‑150 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa > 2:1436243/1‑150 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa < 2:1703567/150‑1 (MQ=255) aCCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCa < 1:1014679/150‑1 (MQ=255) cccGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg < 1:1436243/150‑1 (MQ=255) aCGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAcc < 2:546421/150‑1 (MQ=255) aCGAGACGCCAGCCTATAAAGTCTGGCGGCTCGCCCAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAAcc > 2:1195082/1‑150 (MQ=255) aCGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCAtc < 1:1068729/150‑1 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc > 2:541341/1‑125 (MQ=255) aGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTc < 1:541341/125‑1 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa > 1:1536612/1‑150 (MQ=255) ccTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa < 2:758678/150‑1 (MQ=255) cTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAg < 2:2081860/150‑1 (MQ=255) tGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg < 1:1257822/129‑1 (MQ=255) tGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAg > 2:1257822/1‑129 (MQ=255) gAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCAcc < 1:1550494/150‑1 (MQ=255) tCTGGCTCCTCGCCGAGTTCTAGAACGCAGCACGGCTATTCGCGCCCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTCCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCCACCAGcacacaca < 2:622867/150‑1 (MQ=255) tcGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc > 2:2141900/2‑52 (MQ=255) tcGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGcc < 1:2141900/51‑1 (MQ=255) ccGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGccc > 2:532544/1‑149 (MQ=255) ccGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa < 1:800698/150‑1 (MQ=255) cGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCATAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAg > 2:2042758/1‑150 (MQ=255) cGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAg < 1:699004/150‑1 (MQ=255) aGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCa > 1:693062/1‑150 (MQ=255) gTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCa > 2:192468/1‑128 (MQ=255) gTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCa < 1:192468/128‑1 (MQ=255) ttCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATc < 2:973898/150‑1 (MQ=255) cTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGt > 1:436724/1‑150 (MQ=255) aGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCt < 2:2235155/150‑1 (MQ=255) gAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTg > 1:2102133/1‑150 (MQ=255) gAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTg < 2:693062/150‑1 (MQ=255) gAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTg < 1:115467/150‑1 (MQ=255) aTCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCATAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGaaaa < 1:2042758/150‑1 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAac < 2:1216785/150‑1 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAac < 2:1881240/150‑1 (MQ=255) tCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAac > 1:1216785/1‑150 (MQ=255) aCGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAacac > 2:1769660/1‑150 (MQ=255) ggccctttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAAcaca > 1:2050443/7‑150 (MQ=255) cTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATcc < 1:1489887/150‑1 (MQ=255) cTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCAACATCGGCACTGCCAGCATCGTCTGCGAAAACACATcc > 1:520559/1‑150 (MQ=255) tATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCcg > 2:1639173/1‑150 (MQ=255) ctttCGCGGGCGTGCCCGCGAATGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa > 2:701989/3‑83 (MQ=38) ctttCGCGGGCGTGCCCGCGAATGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACaa < 1:701989/81‑1 (MQ=38) ctttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa > 1:431740/3‑126 (MQ=255) ctttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCa < 2:431740/124‑1 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCGACAATCTCCTTGCCTGGCTCCGGCCGCATCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCCCTCCCAGCATCGTCTACGAAAACACATCcgg > 2:458164/2‑150 (MQ=255) tttCGCGGGCGTGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACa < 2:629655/103‑1 (MQ=255) gcgGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGgt < 2:911188/150‑1 (MQ=255) tcACTCCCGCGAAAGGTCACTACAATCCAGCCACAACCTCTTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCa < 1:21938/149‑1 (MQ=255) gCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCTGCGGCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCa < 1:1195082/150‑1 (MQ=255) | GGAAGAGTGGAAGGTGGAGCTGGTGGTGGCTGACGAGCTGATTGTGCAGGTCGTCGCTGCGCTCAAGCAGAGCCACCCGTACGAGACGCCAGCCTATGAAGTCTGGCGGCTCGCCGAGTTCTAGAACGCATCACGGCTATTCGCGGGCACGCCCGCGAAAGGGCCCTACAATCCAGCCACAATCTCCTTGCCTGGCTCCGGCCGCTTCAACATTCCACAAGCCAGCAACCCCATCTCGAACAGCACCCACATCGGCACTGCCAGCATCGTCTGCGAAAACACATCCGGCGGTGTCA > NC_002947/1188893‑1189188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |