| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,508,089 | A→C | 5.8% | intergenic (+19/+43) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,508,089 | 0 | A | C | 5.8% | 292.2 / 8.5 | 103 | intergenic (+19/+43) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (52/45); new base C (3/3); total (55/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.78e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGT > NC_002947/1507941‑1508238 | ggAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat < 1:1861615/150‑1 (MQ=255) ccGTCTTCGAGAGATGGCGACGAGATGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACTATGGAGGGCAGCCGCCG‑CGTCCGACTGGCAGGCCAAGCCTGAAAGTGGAAAAAAAAAAAAAAAAGGCGATCCggatggat < 2:648334/150‑1 (MQ=255) cGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGG‑CGACGGGTGTCGCCGTCCTACGGGCCGGCGAAGCCTGCAAGTGATAAAACATCATAAAAAGGCGATCCGGATGGATc > 1:1212138/1‑150 (MQ=255) gTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCg < 2:211960/150‑1 (MQ=255) tCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGACCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGc > 2:1482444/1‑150 (MQ=255) cTTAGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCATCCGGATCGCCt < 2:1473801/150‑1 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt > 2:78741/1‑150 (MQ=255) cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCttt < 1:679941/150‑1 (MQ=255) cGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCttt < 1:468435/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAACAAGGCGATCCGGATGGATCGCCTTTtttgttt < 1:78741/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt > 1:2007661/1‑150 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt > 1:866126/1‑150 (MQ=255) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc > 2:414948/1‑150 (MQ=255) gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc < 2:39045/149‑1 (MQ=255) gacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc > 1:39045/1‑149 (MQ=255) cTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGcc < 2:548616/144‑1 (MQ=255) cTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGcc > 1:548616/1‑144 (MQ=255) cTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCa < 1:414948/150‑1 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAg > 1:934508/1‑150 (MQ=255) tGGAAGACGATGATGTGCAGCCGGATGACGATCGCGCGCCACACTATTTAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAg < 2:2007661/150‑1 (MQ=255) ggAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAgg < 1:2325188/150‑1 (MQ=255) gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGc > 2:170714/1‑150 (MQ=255) aGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGGGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCaa < 1:564149/150‑1 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgt > 2:1886638/1‑129 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgt < 1:1886638/129‑1 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:1281423/1‑150 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa > 1:535460/1‑150 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa > 2:1748576/1‑150 (MQ=255) atgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGCACGTCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAg < 1:185858/150‑1 (MQ=255) tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGt < 2:1622126/150‑1 (MQ=255) tgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCa > 1:2257678/1‑150 (MQ=255) cAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt < 2:1009539/122‑1 (MQ=255) cAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTACTACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt > 1:1009539/1‑122 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 1:1281423/150‑1 (MQ=255) gATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGt > 2:1973678/1‑150 (MQ=255) tGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTAc > 1:366225/1‑150 (MQ=255) tGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTAc < 1:1956523/150‑1 (MQ=255) cGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCg > 2:1648464/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc < 2:1826275/113‑1 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGc > 1:1826275/1‑113 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt < 1:135705/130‑1 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt > 2:135705/1‑130 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 1:2110036/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:303127/1‑150 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTc > 2:808603/1‑112 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTAc > 2:1183044/1‑140 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTAc < 1:1183044/140‑1 (MQ=255) ccGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCttt > 2:322973/1‑97 (MQ=38) ccGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCttt < 1:322973/97‑1 (MQ=38) ccAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGa < 2:934508/150‑1 (MQ=255) cAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGAc > 1:2108728/1‑150 (MQ=255) aGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACg > 1:539394/1‑150 (MQ=255) gACGATGGAGGGCAGCCGCCG‑CGCCCGACTGGCCGGCCAAGCCCGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGa < 2:1875917/150‑1 (MQ=255) gATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtct < 2:366225/150‑1 (MQ=255) aGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGc < 2:2110036/150‑1 (MQ=255) ggCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCAc > 2:1392645/1‑150 (MQ=255) ggCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCAc > 2:1636979/1‑150 (MQ=255) aGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGcc > 2:2330225/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc < 2:2108728/150‑1 (MQ=255) gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:2289784/99‑1 (MQ=255) gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt > 1:2289784/1‑99 (MQ=255) cggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACgg > 1:153523/1‑150 (MQ=255) ccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTCTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAg < 1:1447109/150‑1 (MQ=255) aaGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACACCCGAAACACCCTGCACCACGGCAGTg > 1:1172110/1‑150 (MQ=255) aGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTgg < 2:1172110/150‑1 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACgg > 2:621910/1‑141 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACgg < 1:621910/141‑1 (MQ=255) cTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCAATGAGTCAATCGATGTACTCGAACAGCTTGACGCGCAGCGCCACGCCCGAAACACCCTGCACCACGGCAGTGGCCg > 1:22951/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc < 2:1033028/100‑1 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGc > 1:1033028/1‑100 (MQ=255) aaaGTGGGCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATATACTCGAACAGATTGACGCTCTGTTTCACGCCCGCCACACCCTGCACCACGGCAGGGCCCggcg > 2:263226/1‑147 (MQ=255) aGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTg < 1:2330225/150‑1 (MQ=255) gccaaacaaaaaaGGCGATCCATCCGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTg > 1:1764562/8‑150 (MQ=38) aGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc < 2:1548435/97‑1 (MQ=255) aGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtc > 1:1548435/1‑97 (MQ=255) gTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGa > 1:519775/1‑150 (MQ=255) tAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc > 1:873176/1‑150 (MQ=255) tAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc < 1:170714/150‑1 (MQ=255) tAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTAGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc < 1:163471/150‑1 (MQ=255) caaacaaaaaaGGCGATCCATACGGATCGCCTTTTTTGCTTGAACAACGCCTACTCTAACTGATGCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCCGTGGCCGAGGTGGCTTCTTGAc > 1:45799/6‑150 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTc > 1:1093172/1‑77 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTc < 2:1093172/77‑1 (MQ=255) aCAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg < 1:1973678/150‑1 (MQ=255) aaaaaaaTGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTg > 2:1160456/1‑58 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTg < 1:1160456/58‑1 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGGTCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:683771/1‑150 (MQ=255) aaaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 1:1841361/67‑1 (MQ=255) aaaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt > 2:1841361/1‑67 (MQ=255) aaaaaGGCGATCCATCCGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:287823/57‑1 (MQ=17) aaaaaGGCGATCCATCCGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa > 1:287823/1‑57 (MQ=17) aaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 2:2028565/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGATGAc < 2:873176/150‑1 (MQ=255) aaGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa < 1:1648464/150‑1 (MQ=255) ggCGATCCGGATGGATCGCCTTTTTTTTTTTTTTTTTCCAGGCAATAAATGATTCAATCGATATACTCGTACAGCTTGACGATCTTCTTCACGCCCGAAACACTCTGCACCACGGCAGTGGCCTAGTTGTCTTCTTTACGTGTGTCCatg > 2:1477770/1‑148 (MQ=255) gATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGtt < 2:1729123/125‑1 (MQ=255) gATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGtt > 1:1729123/1‑125 (MQ=255) tCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg < 2:560508/102‑1 (MQ=255) tCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg > 1:560508/1‑102 (MQ=255) tCCGGATGGATCGAATTTTTTTTATGTCCTGTACAGGCCATGACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcag > 2:207503/1‑150 (MQ=255) atggatCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGt < 1:1392645/150‑1 (MQ=255) | GGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCG‑CGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGGT > NC_002947/1507941‑1508238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |