| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,596,415 | A→T | 5.4% | L213Q (CTG→CAG) | dctD‑III ← | C4‑dicarboxylate transport transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,596,415 | 0 | A | T | 5.4% | 404.5 / 9.2 | 129 | L213Q (CTG→CAG) | dctD‑III | C4‑dicarboxylate transport transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (66/55); new base T (3/4); total (70/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
GCTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCA > NC_002947/1596266‑1596562 | tCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGt > 1:380609/1‑150 (MQ=255) tCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGt > 2:764545/1‑150 (MQ=255) gTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCgg > 2:940186/1‑150 (MQ=255) gTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGACTGCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCgg > 2:1494672/1‑150 (MQ=255) cccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGa > 2:457285/1‑150 (MQ=255) ccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGaa > 1:954205/1‑150 (MQ=255) ccGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCGGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGaa > 1:2045238/1‑150 (MQ=255) ttGGCCTGTTGGGCCAGGGTCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCg < 2:1534816/150‑1 (MQ=255) ttGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCg > 1:1001339/1‑150 (MQ=255) tGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCGTACTCGAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACGGTTCGGCCTCGCAAAGCGACTCgg > 2:416921/1‑150 (MQ=38) ccTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGa < 2:2155710/150‑1 (MQ=255) cTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGGCTCGGGGAt > 1:4402/1‑150 (MQ=255) tGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATg > 1:1246728/1‑150 (MQ=255) tGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATg > 2:1486381/1‑150 (MQ=255) tGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCAGATTCGAACAGTTCGGCCTCGAACAGCGACGCGGGGGTg > 1:491020/1‑150 (MQ=255) tGTTGGGCCAGGGGCATCCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATg > 2:374980/1‑150 (MQ=255) ttGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGccat < 2:1930412/129‑3 (MQ=255) ttGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGccat > 1:1930412/1‑127 (MQ=255) gggCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCcg > 1:1051731/1‑150 (MQ=255) ggCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCggg < 1:1982432/141‑1 (MQ=255) ggCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCggg > 2:1982432/1‑141 (MQ=255) gCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCcgcg > 2:2203760/1‑150 (MQ=255) cAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAg > 1:847516/1‑129 (MQ=255) cAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCa > 2:618915/1‑150 (MQ=255) gggCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGtt > 1:918654/1‑150 (MQ=255) ggCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTa > 2:2042206/1‑150 (MQ=255) cATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCTCCGCTCTCATGGTCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTacg < 1:1215343/150‑3 (MQ=255) aTGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAggatgac < 2:1246728/150‑7 (MQ=255) aTGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAgg < 2:2045238/150‑1 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCg < 1:368996/110‑1 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCg > 2:368996/1‑110 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAggg < 1:457285/150‑1 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAggg < 1:580029/150‑1 (MQ=255) tGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAggg < 1:2120783/150‑1 (MQ=255) aTTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAg > 1:2284987/1‑150 (MQ=255) aTTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAg < 2:1016286/150‑1 (MQ=255) tttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgg > 1:1204126/1‑120 (MQ=255) tttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAgg > 2:1156288/1‑150 (MQ=255) ttCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAggg < 1:683182/150‑1 (MQ=255) gtcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCtt < 2:954205/150‑1 (MQ=255) tcgAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCAGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGCCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTg > 1:2221949/1‑150 (MQ=255) gAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTggc > 1:841465/1‑150 (MQ=255) gAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTggcggc > 1:546689/1‑150 (MQ=255) acacGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGAc < 1:2076720/104‑1 (MQ=255) acacGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGAc > 2:2076720/1‑104 (MQ=255) gTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACggggg < 1:961916/150‑1 (MQ=255) gCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGcc < 2:565737/150‑1 (MQ=255) aCCGTTGGCATACTCCAGCTTGCCGATGCGTTTACAATGGGCGACATATAAATATGCTCGCTCAGGTCTTATTAGTTCGGCCTCGGACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGGTACAAAGGGCTTGGCGGCACGGGGGCCGaa > 1:1798279/1‑150 (MQ=255) ggCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGctat < 2:1844619/78‑4 (MQ=255) ggCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGccat > 1:680386/1‑76 (MQ=255) ggCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACTGTTCGGccat < 2:680386/78‑3 (MQ=255) ggCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTg < 2:1051731/150‑1 (MQ=255) ggCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTg < 2:546689/150‑1 (MQ=255) gCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgc > 2:1671262/1‑150 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgca < 2:1157629/150‑1 (MQ=255) cATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgca > 2:1393192/1‑150 (MQ=255) aTACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGc < 1:1718391/137‑1 (MQ=255) aTACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGc > 2:1718391/1‑137 (MQ=255) tACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACgg < 1:1995918/132‑1 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg > 2:728202/1‑104 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcaggcag > 1:966065/1‑150 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcag < 1:1953588/146‑1 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcag > 2:1953588/1‑146 (MQ=255) tCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACCCGGGGATGGCCGCGCAGTTAAg < 1:728202/104‑1 (MQ=255) ccAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATTGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGc > 2:267260/1‑150 (MQ=255) ccAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg < 2:604531/103‑1 (MQ=255) ccAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAg > 1:604531/1‑103 (MQ=255) cgCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCCTGCAGGCAGCgg < 1:102409/149‑1 (MQ=255) cTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGc < 2:219699/150‑1 (MQ=255) ccGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCAcc > 1:1147167/1‑150 (MQ=255) aTGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGc < 1:2042206/150‑1 (MQ=255) tttACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCtt < 1:1486381/150‑1 (MQ=255) ccTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCAc > 2:485809/1‑150 (MQ=255) cTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgg > 2:1903328/1‑62 (MQ=255) cTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCgg < 1:1903328/62‑1 (MQ=255) tGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCtt < 2:232628/95‑1 (MQ=255) tGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTg > 2:233749/1‑150 (MQ=255) ggCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGCACCGAAGTCGTGCAGGCCGCGGGCCACCCGCTCCTTGCCACTGcc > 2:2232515/1‑150 (MQ=255) cgcCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCgg < 1:618915/150‑1 (MQ=255) cgcCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTAGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCgg < 2:768333/150‑1 (MQ=255) ccGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGttt > 2:2288566/1‑150 (MQ=255) ccGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGttt < 1:1494672/150‑1 (MQ=255) acGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTgcagg > 1:713461/2‑116 (MQ=255) gTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCa > 2:209023/1‑150 (MQ=255) gTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCa < 1:374980/150‑1 (MQ=255) gTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCCGTTTCa > 2:1955694/1‑150 (MQ=255) aGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACcgc < 1:2209319/150‑1 (MQ=255) gcgcCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCgg < 1:764545/150‑1 (MQ=255) cgcTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGcc < 2:691092/91‑1 (MQ=255) ctctCATGGCCGAACAGTTCGGCATCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAac < 2:1253187/150‑1 (MQ=255) tctcATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGGTGGCCGCGCAGTTAAGGGCTACAGAGGGCTTGGCGTCATGGGGGCCGAAGTCGTGCAGGCAGCGGGCCTCCCGCTCCTTGCCACTACAGGTTTCACAGCGGATCAaca > 1:360860/1‑150 (MQ=255) cATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGt < 1:1671262/150‑1 (MQ=255) aTGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATgg < 2:192417/41‑1 (MQ=255) aTGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATgg > 1:192417/1‑41 (MQ=255) aTGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGTGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGtt > 1:1486182/1‑150 (MQ=255) aTGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGtt > 2:882662/1‑150 (MQ=255) cGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCg > 1:170461/1‑150 (MQ=255) gAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCgg < 1:746777/150‑1 (MQ=255) aaCAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGTGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGc < 2:1486182/150‑1 (MQ=255) aCAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCa > 2:524990/1‑150 (MQ=255) | GCTCCTGTATCACCCGCAACAGCTTGGCCTGTTGGGCCAGGGGCATGCTCTCGATTTCGTCGAGGAACACGGTGCCACCGTTGGCATACTCCAGCTTGCCGATGCGTTTACCCTGGGCGCCCGTGAAGGCGCCGCTCTCATGGCCGAACAGTTCGGCCTCGAACAGCGACTCGGGGATGGCCGCGCAGTTAAGGGCTACAAAGGGCTTGGCGGCACGGGGGCCGAAGTCGTGCAGGCAGCGGGCCACCCGCTCCTTGCCACTGCCGGTTTCACCGCGGATCAACACGTTCACCGGCA > NC_002947/1596266‑1596562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |