| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,691,814 | T→C | 16.1% | intergenic (+39/‑132) | PP_1487 → / → PP_1488 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,691,814 | 0 | T | C | 16.1% | 198.9 / 28.5 | 89 | intergenic (+39/‑132) | PP_1487/PP_1488 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base T (40/34); new base C (7/7); total (48/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.60e-02 | |||||||||||
GGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCTT > NC_002947/1691667‑1691962 | ggAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCg > 2:2069789/1‑150 (MQ=255) gAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGa > 2:2142062/1‑150 (MQ=255) aaaaCTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAg < 1:1711067/150‑1 (MQ=255) tCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTGGCGCCAGAAGTTTGAAAGACTGGTGCGGGTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGc‑gccgc < 1:164967/150‑1 (MQ=255) gCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCCCGAGCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTgcg > 1:613924/1‑150 (MQ=255) gTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTgcggc < 1:388507/150‑1 (MQ=255) aCCTGGACGAGCTGGCCAGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCACGGGCGGCGCTcga < 1:1871861/150‑3 (MQ=255) ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGt > 2:1148282/1‑150 (MQ=255) cTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGtc < 1:789805/150‑1 (MQ=255) tGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGtct > 1:434332/1‑150 (MQ=255) aCGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCCGGTGCGGTTGGCTACAGCGTAGTGGCGGTGCTTGCAACGGCCTATTGAGCGGCTGTGAGATCGAGC‑GCCGGCCGTGCGGCGCTCCGTCTcac > 2:635816/1‑150 (MQ=255) gAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg > 2:769618/1‑150 (MQ=255) gAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg < 2:44221/150‑1 (MQ=255) gCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGgc < 1:411702/150‑1 (MQ=255) ccGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGTGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTcgat > 2:1494989/1‑132 (MQ=38) ccGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGTGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTcgat < 1:1494989/135‑4 (MQ=38) cGCCAGCTGCGGCTGGAGCCGGGCTTGCGCCAGGACGTGGAAAGGCAGTGCCGGACGGCTGCAGCGTAGTGGCGGGTATTGCCATCGATTATTGCGAGGCTGTGAGCATGTGC‑GCCGGCCGTGCGTTGCACCTTCGCACAGGCGCgaaaa > 2:40647/1‑149 (MQ=255) cAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTcc > 1:112488/1‑150 (MQ=255) aGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCt < 2:51880/150‑1 (MQ=255) tGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTcac < 2:873790/132‑1 (MQ=255) tGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTcac > 1:873790/1‑132 (MQ=255) cTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCTGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAACTTCCTGACGACaa < 2:1255576/150‑1 (MQ=255) tGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAAt < 1:2069789/150‑1 (MQ=255) ggACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATc < 2:436703/150‑1 (MQ=255) aCCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcac < 1:769618/150‑1 (MQ=255) cccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATcaca > 2:1488524/1‑150 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTTAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACAt < 2:1135911/150‑1 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTga > 1:1028643/1‑138 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTga < 2:1028643/138‑1 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACAt < 2:1863273/150‑1 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACAt < 2:424841/150‑1 (MQ=255) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAg < 1:1087274/123‑1 (MQ=25) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAg > 2:1087274/1‑123 (MQ=25) ccGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGACATCAAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACCGGCGCAAAAGTCCTGACGACAATCACAt > 1:25907/1‑150 (MQ=255) ggCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCaa < 1:1409963/150‑1 (MQ=255) cTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATa < 2:112488/150‑1 (MQ=255) cgcCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGt < 1:1148282/150‑1 (MQ=255) gcCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGCGCT‑AAGCGGCCGTCCGTGCGGCGCTCCGTCTCCCAGGCGCAACCTATGGCACTACAGTCACATCAATACCGTa > 1:633326/1‑150 (MQ=255) gcCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTa > 1:1525888/1‑150 (MQ=255) ggAACTGGAAAGCCAGGTGCGGTTTGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGAc < 1:588395/150‑1 (MQ=255) cTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGCCAATCACATCAATACCGTAAGACctct < 2:209658/150‑1 (MQ=255) tGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTg > 1:415441/1‑150 (MQ=255) tGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTg > 1:1962077/1‑150 (MQ=255) ggAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAGgcgc > 2:2288055/1‑107 (MQ=21) ggAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAGgcgc < 1:2288055/107‑1 (MQ=21) gAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg < 1:1841728/102‑1 (MQ=255) gAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg > 2:1841728/1‑102 (MQ=255) aaaGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGCGA‑GCCAGCTGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGc > 1:282455/1‑150 (MQ=255) ggTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACtt < 2:415441/150‑1 (MQ=255) gctgTTGGCTGCAGCATCGTGCCGGTGCTAGCCTCCGCCGATCATGCGGTCGTGATATCGAGC‑CCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCgg < 2:613924/147‑1 (MQ=255) gCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCgg < 1:1999399/150‑1 (MQ=255) ggTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATAACGTAAGACCTCTGGGCTATACTTCGGCg > 2:375262/1‑150 (MQ=255) gTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGa < 2:1962077/150‑1 (MQ=255) tGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGAGGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTc > 1:850454/1‑150 (MQ=255) tGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTAGGCTATACTTCGGCGagtggtc > 2:133768/1‑144 (MQ=255) cAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTcgat < 1:2005398/73‑4 (MQ=17) cAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTcgat > 2:2005398/1‑70 (MQ=17) gCGTAGTGGCGGTGCTTGCCACGGCCTATT‑AGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg > 2:302152/1‑77 (MQ=255) gCGTAGTGGCGGTGCTTGCCACGGCCTATT‑AGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAg < 1:302152/77‑1 (MQ=255) gCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTtgtg > 1:1808058/1‑150 (MQ=255) cTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAAt < 2:1622487/95‑1 (MQ=255) cTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAAt > 1:1622487/1‑95 (MQ=255) cTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTcc > 2:1949544/1‑150 (MQ=255) cTTCCCACGGCCTATTGACCGCCTTTGAGATCGAGC‑GCCGCACGGCCGGCGCTACGTCTCAAAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTcc < 2:850454/150‑1 (MQ=255) cACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACctct < 2:1507007/104‑1 (MQ=255) cACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACctct > 1:1507007/1‑104 (MQ=255) cACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAgg > 2:1446028/1‑150 (MQ=255) gCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTg < 2:1525888/150‑1 (MQ=255) tATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACGGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAt > 1:977920/1‑150 (MQ=255) tATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAt < 1:2142062/150‑1 (MQ=255) aTTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAtg > 1:1039731/1‑150 (MQ=255) ttttgcgcCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAGGCGCGAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTc > 2:354532/5‑135 (MQ=21) ttttgcgcCTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCGATCTCACAGGCGCGAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTc < 1:354532/131‑1 (MQ=21) ccgcCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTgaag > 2:859486/2‑150 (MQ=255) cgcCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTgaaga > 2:286630/1‑150 (MQ=255) ccTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAAc > 1:1198492/1‑150 (MQ=255) cTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACt > 1:2224079/1‑150 (MQ=255) cTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACt > 1:445644/1‑150 (MQ=255) cTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACt > 1:2189846/1‑150 (MQ=39) cTGTGAGACGGAGC‑GCCGCACGGGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACt < 2:2189846/150‑1 (MQ=39) tgtgAGACGGAGC‑GCCGCACGGGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTc > 1:2337574/1‑126 (MQ=38) tgtgAGACGGAGC‑GCCGCACGGGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTc < 2:2337574/126‑1 (MQ=38) gtgAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTgg > 2:771826/1‑150 (MQ=255) agaTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGAcc > 1:435119/1‑150 (MQ=255) agaTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGAcc > 2:871198/1‑150 (MQ=255) gaTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTc > 1:644473/1‑104 (MQ=255) gaTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTc < 2:644473/104‑1 (MQ=255) gaTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCt > 2:290419/1‑150 (MQ=255) aTCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCtt > 1:1432374/1‑150 (MQ=255) | GGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGC‑GCCGCCCGTGCGGCGCTCCGTCTCACAGGCGCAAAATTCCTGACGACAATCACATCAATACCGTAAGACCTCTGGGCTATACTTCGGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAATGTGAAGAACTGGACCTT > NC_002947/1691667‑1691962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |