| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,523,298 | A→C | 5.3% | intergenic (+60/‑24) | PP_2212 → / → PP_2213 | leucine‑rich repeat‑containing protein/acyl‑CoA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,523,298 | 0 | A | C | 5.3% | 264.5 / 5.7 | 94 | intergenic (+60/‑24) | PP_2212/PP_2213 | leucine‑rich repeat‑containing protein/acyl‑CoA synthetase |
| Reads supporting (aligned to +/- strand): ref base A (54/35); new base C (2/3); total (56/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.42e-01 | |||||||||||
TACAGGAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCTTGAAGCCCTT > NC_002947/2523150‑2523444 | tACAGGAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAg > 1:1766649/1‑150 (MQ=255) aCAGGAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAgc < 1:1650103/150‑1 (MQ=255) gAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAgcggcg < 1:315897/150‑1 (MQ=255) gAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGAGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCCTCCCGATTGACAGCT‑TTGGCCATTGCCGCCGAGCATGAgcggcg > 1:302169/1‑150 (MQ=255) cagGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACa > 2:1712797/1‑150 (MQ=255) ccTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACAtcgtc > 2:1943903/1‑150 (MQ=255) ccTCGATATCGAGCGCCTGGTCGCAGGGCACACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGGGATTAGCGGCGGCCAAACCAGGCATCCAGAATGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGGGCGAACAtcggc > 2:289377/1‑148 (MQ=255) cTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACAtcgtcg > 2:1220394/1‑150 (MQ=255) cTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACAtcgtag < 1:2088948/150‑3 (MQ=255) gATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGAc > 1:333313/1‑150 (MQ=255) cGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATg < 1:340121/150‑1 (MQ=255) gAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGc > 2:1658593/1‑150 (MQ=255) gcgcCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCtt < 1:1044406/150‑1 (MQ=255) gcgcCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCtt > 1:1326428/1‑150 (MQ=255) cgcCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGGGTGAACATCGTCGGACCGATGCTTc < 1:2068307/150‑1 (MQ=255) cTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAAc > 1:620565/1‑150 (MQ=255) cTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAAc < 1:394331/150‑1 (MQ=255) cTGGTCGCAGGGCTCACCCAGTCCTAAATGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAAc > 1:1229870/1‑150 (MQ=255) gTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTcc < 1:876730/150‑1 (MQ=255) tCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCa > 2:633649/1‑150 (MQ=255) gCAGGGCTCACCCATTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCaaa > 2:1359860/1‑150 (MQ=255) aGGGCTCACCCAGTCCTACCTGCGTGCAGCAGAGCGCGCAAAGGGGTGAGGAGCGGCGGCCAAACCAATCATCGAGATTGACACCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCTACTCCaaaaa > 1:1332932/1‑150 (MQ=255) aCCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCCTGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGaaa > 2:1076096/1‑150 (MQ=255) cccAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAAc > 2:1690180/1‑150 (MQ=255) ccAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAAcc > 1:1320121/1‑150 (MQ=255) cAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCa < 2:1326428/150‑1 (MQ=255) gTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAgg > 1:112024/1‑150 (MQ=255) aCCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCaa > 1:1932383/1‑124 (MQ=255) aCCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCaa < 2:1932383/124‑1 (MQ=255) gCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGgcgc < 2:1963029/95‑1 (MQ=255) gCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGgcgc > 1:1963029/1‑95 (MQ=255) tGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGGCCGatgatg > 1:2016071/1‑150 (MQ=255) gCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACaa < 2:1628488/128‑1 (MQ=255) gCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACaa > 1:1628488/1‑128 (MQ=255) gCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCAGCCAAACCAGTCATCCAGATTGACAGCTGTTGGCTCCAGCTG‑CGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATgc < 1:633649/150‑1 (MQ=255) aGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATgcgc < 2:1229870/150‑1 (MQ=255) gCCGAGCGCGCGGAGGGGTGATTAGCGGCGGCCAAACCAGCCATCCAGATTGACAGCT‑TTGGCCATTCCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGATTCAACCACAAAAAAAAGAAACCAGGAATCCGATGATGcgcg > 1:1992547/1‑150 (MQ=255) gcgcgcAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAACCAAGAAACCAGGAGACCGACGAGGTGCGGTTag > 2:724594/1‑149 (MQ=255) gcgcgcAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCga > 2:218502/1‑136 (MQ=255) gcgcgcAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCga < 1:218502/136‑1 (MQ=255) gcgcAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGc > 1:1702860/1‑150 (MQ=255) cAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGAATGCGCGGGGCGAACATCGTCTGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGa < 1:868885/150‑1 (MQ=255) agagGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAg > 1:690789/1‑150 (MQ=255) gagGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAgg < 2:690789/150‑1 (MQ=255) gagGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAgg < 2:1766649/150‑1 (MQ=255) gggTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCg > 1:1116746/1‑150 (MQ=255) tGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTc < 2:1332932/150‑1 (MQ=255) ttAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTa > 2:1461999/1‑150 (MQ=255) ttAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTa < 1:1658593/150‑1 (MQ=255) tAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTAc < 2:620565/150‑1 (MQ=255) ggcCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGAc < 2:1649301/150‑1 (MQ=255) ggcCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGACCGATGATGCACGATTACGCCGAGGCCGCTCGTACGTTCGaa > 1:1371282/1‑149 (MQ=255) gcCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGAcc > 1:29217/1‑150 (MQ=255) aGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAg > 1:658050/1‑150 (MQ=255) tCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATg < 2:1656074/143‑1 (MQ=255) tCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATg > 1:1656074/1‑143 (MQ=255) aTCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCg > 1:601275/1‑150 (MQ=255) aTCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCg > 2:685934/1‑150 (MQ=255) tCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGt > 2:2171952/1‑150 (MQ=255) tCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGt > 2:917932/1‑150 (MQ=255) tCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGt > 1:105469/1‑150 (MQ=255) ccAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGtt < 2:1702860/150‑1 (MQ=255) cAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTtg > 2:836378/1‑150 (MQ=255) aGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGc > 1:1747420/1‑111 (MQ=255) aGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGc < 2:1747420/111‑1 (MQ=255) aGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGCCCATGACCAGGCCGTtgt > 2:360306/1‑150 (MQ=255) aTTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCACAAAACTCGCCGCATCGCTCATTGAAATAACAAACCAAGGAACCAGGGGTTTGAGGATGCGCGGTTATGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGa < 2:2016071/150‑1 (MQ=255) tGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTAAACTCGAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTATGCTGAGGCCGCTCGTGCGTTCGACTATGACCAGGCCTTTGTGACg > 2:720366/1‑150 (MQ=255) gACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACgg < 1:1975265/150‑1 (MQ=255) aCAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGc > 1:819125/1‑150 (MQ=255) cAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCgat > 1:810530/1‑89 (MQ=255) cAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCgat < 2:810530/89‑1 (MQ=255) aGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCAt > 2:2079809/1‑150 (MQ=255) tGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCAc > 1:967726/1‑150 (MQ=255) gCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACgg > 1:1093282/1‑150 (MQ=255) gCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACgg < 2:601275/150‑1 (MQ=255) ccATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGa > 1:1260408/1‑65 (MQ=255) ccATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGa < 2:1260408/65‑1 (MQ=255) tgttcgcgccgcTCATGCGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACgg > 2:2290908/7‑148 (MQ=255) tgttcgcgccgcTCATGCGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACgg < 1:2290908/142‑1 (MQ=255) aTTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATgcgc < 2:439560/85‑1 (MQ=255) aTTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATgcgc > 1:439560/1‑85 (MQ=255) aTTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGtt < 1:2076252/130‑1 (MQ=255) aTTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGtt > 2:2076252/1‑130 (MQ=255) ttGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAAc < 1:341110/150‑1 (MQ=255) tcgcgccgcTCATGCGCGGCGCGAACATCGTCGGACTGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGa > 2:2320687/4‑94 (MQ=255) tcgcgccgcTCATGCGCGGCGCGAACATCGTCGGACTGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGa < 1:2320687/91‑1 (MQ=255) tGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAAcc < 2:819125/150‑1 (MQ=255) gccgccGCGCATAAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCt > 2:1102545/1‑150 (MQ=255) gcgcATGAGCGGCGCGAACATTTTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACGAGGACGTTGAGACCGCAGTTGACTGCAACCTTGAAGc > 2:2006926/1‑150 (MQ=255) gcgcATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCTTGAAGc > 1:560175/1‑150 (MQ=255) cgcATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCTTGAAGcc < 1:836378/150‑1 (MQ=255) gcATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCTTGAAGccc < 2:1116746/150‑1 (MQ=255) aTGAGCGGCGCGACCATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATCGCACGGTACCCTTGAAGCACtt > 2:139636/1‑150 (MQ=255) | TACAGGAACAGCAGGACCTCGATATCGAGCGCCTGGTCGCAGGGCTCACCCAGTCCTACCTGCGTGCAGCCGAGCGCGCAGAGGGGTGATTAGCGGCGGCCAAACCAGTCATCCAGATTGACAGCT‑TTGGCCATTGCCGCCGCGCATGAGCGGCGCGAACATCGTCGGACCGATGCTTCAACTCCAAAAACAAGAAACCAGGAGTCCGATGATGCGCGATTACGCCGAGGCCGCTCGTACGTTCGACCATGACCAGGCCGTTGTGACGGCATTGCACGGCAACCTTGAAGCCCTT > NC_002947/2523150‑2523444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |