Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,710,426 G→C 6.1% R321P (CGT→CCT)  PP_2372 → sugar‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,710,4260GC 6.1% 251.5 / 7.3 82R321P (CGT→CCT) PP_2372sugar‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (39/38);  new base C (2/3);  total (41/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01

TACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAGGGAAGGGCATTGCTCGTCT  >  NC_002947/2710282‑2710575
                                                                                                                                                |                                                                                                                                                     
tACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCCTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGc                                                                                                                                                  >  2:1358105/1‑150 (MQ=255)
    gATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAACGCCTGGCCTTGGcctga                                                                                                                                              <  2:412280/150‑5 (MQ=255)
       gggtgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGCTGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGCTGGCTGAAGCt                                                                                                                                           >  1:358991/1‑150 (MQ=255)
        ggtgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTg                                                                                                                                          <  1:2002324/150‑1 (MQ=255)
         gtgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGt                                                                                                                                         <  1:442349/150‑1 (MQ=255)
          tgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        >  1:1861191/1‑150 (MQ=255)
          tgggCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        >  1:1432577/1‑150 (MQ=255)
             gCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGa                                                                                                                                     >  2:293346/1‑150 (MQ=255)
                tttaagccTTCGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAg                                                                                                                                  <  1:177961/144‑1 (MQ=255)
                    aCCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgac                                                                                                                              <  2:125811/150‑1 (MQ=255)
                      ccTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGATGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgacga                                                                                                                            <  1:627631/150‑1 (MQ=255)
                      ccTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAACTCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgacga                                                                                                                            >  2:421448/1‑150 (MQ=255)
                          ggCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTAc                                                                                                                        >  2:710149/1‑150 (MQ=255)
                             ggTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGc                                                                                                                     <  1:289209/150‑1 (MQ=255)
                              gTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        >  2:2019285/1‑130 (MQ=255)
                              gTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        <  1:2019285/130‑1 (MQ=255)
                                tGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAAACCAAGGCCAGGCGTTTGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTc                                                                                                                  <  1:293346/150‑1 (MQ=255)
                                       tGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGAGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTc                                                                                                           <  1:594045/150‑1 (MQ=255)
                                          tGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGGCCTCTTCCGGTATTGGAGTAAAGCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGATGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGc                                                                                                        >  1:2036456/1‑150 (MQ=255)
                                          tGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        <  2:1135296/118‑1 (MQ=255)
                                          tGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGtt                                                                                                                                        >  1:1135296/1‑118 (MQ=255)
                                           gATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTg                                                                                                                                                    >  2:2279167/1‑105 (MQ=255)
                                           gATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTg                                                                                                                                                    <  1:2279167/105‑1 (MQ=255)
                                              gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTa                                                                                                    <  2:1875558/150‑1 (MQ=255)
                                              gctgcACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTa                                                                                                    >  2:454994/1‑150 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTc                                                                                                           >  2:729544/1‑136 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTc                                                                                                           <  1:729544/136‑1 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAACGCCTGGCCTTGGc                                                                                                                                                  >  1:1616799/1‑97 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAACGCCTGGCCTTGGc                                                                                                                                                  >  1:1616597/1‑97 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAACGCCTGGCCTTGGc                                                                                                                                                  <  2:1616799/97‑1 (MQ=255)
                                                     gatgatGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAACGCCTGGCCTTGGc                                                                                                                                                  <  2:1616597/97‑1 (MQ=255)
                                                            cccACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGggc                                                                                      <  1:421448/150‑1 (MQ=255)
                                                             ccACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGaa                                                                                                                                              <  1:1941386/93‑1 (MQ=255)
                                                             ccACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGaa                                                                                                                                              >  2:1941386/1‑93 (MQ=255)
                                                             ccACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgac                                                                                                                              <  2:1257502/109‑1 (MQ=255)
                                                             ccACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGgac                                                                                                                              >  1:1257502/1‑109 (MQ=255)
                                                               ccGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGggcggc                                                                                   <  2:358991/149‑1 (MQ=255)
                                                               aCGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCg                                                                                                       >  1:2328112/1‑130 (MQ=255)
                                                               aCGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCg                                                                                                       <  2:2328112/130‑1 (MQ=255)
                                                                cGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGgcc                                                                                  <  2:2028305/150‑1 (MQ=255)
                                                                    cTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGga                                                                                                                               >  2:2082422/1‑101 (MQ=255)
                                                                    cTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGga                                                                                                                               <  1:2082422/101‑1 (MQ=255)
                                                                    cTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGccc                                                                              <  1:115431/150‑1 (MQ=255)
                                                                     tGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTg                                                                                               <  2:847295/132‑1 (MQ=255)
                                                                     tGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTg                                                                                               >  1:847295/1‑132 (MQ=255)
                                                                       gCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                                                                                                                                   <  2:638183/78‑1 (MQ=255)
                                                                       gCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                                                                                                                                   <  1:2291921/78‑1 (MQ=255)
                                                                       gCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                                                                                                                                   >  2:2291921/1‑78 (MQ=255)
                                                                       gCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTgg                                                                                                                                                   >  1:638183/1‑78 (MQ=255)
                                                                         gTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGt                                                                                                                   >  1:1217715/1‑108 (MQ=255)
                                                                         gTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGt                                                                                                                   <  2:1217715/108‑1 (MQ=255)
                                                                            gAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCg                                                                      >  2:2097651/1‑150 (MQ=255)
                                                                            gAACAGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCg                                                                      >  2:580218/1‑150 (MQ=255)
                                                                              cggaataCGGCGTTCGCGCACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAg                                                                                         <  2:1295234/123‑1 (MQ=255)
                                                                              cggaataCGGCGTTCGCGCACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAg                                                                                         >  1:1295234/7‑129 (MQ=255)
                                                                              aCCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTAc                                                                                                                        <  1:1740376/98‑1 (MQ=255)
                                                                              aCCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTAc                                                                                                                        >  2:1740376/1‑98 (MQ=255)
                                                                              aCCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGtt                                                                    >  2:344050/1‑150 (MQ=255)
                                                                               ccGCGACGTCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTa                                                                   >  2:218618/1‑150 (MQ=255)
                                                                                 gcgACGGCGTGCGCGAACGCCGTATTCAGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTAcc                                                                 >  1:1010137/1‑150 (MQ=255)
                                                                                           gcgcGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGACAAGACAAGGCGTTCCCTGCAGCTGTTGGACAGGACGGACTGCGGCGTCGATGGTCGTCGTGACAGTGCCGAAGTGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGc                                                       <  2:1432577/150‑1 (MQ=255)
                                                                                                aaCGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCAc                                                  <  1:2097651/150‑1 (MQ=255)
                                                                                                aaCGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCAc                                                  <  2:1861191/150‑1 (MQ=255)
                                                                                                   gCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTc                                                                                                           <  2:1448641/90‑1 (MQ=255)
                                                                                                   gCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTc                                                                                                           >  1:1448641/1‑90 (MQ=255)
                                                                                                      gTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGt                                                                     >  1:706918/1‑125 (MQ=255)
                                                                                                      gTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGt                                                                     <  2:706918/125‑1 (MQ=255)
                                                                                                          tCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCATCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAata                                        >  2:632000/1‑150 (MQ=255)
                                                                                                           ccGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAgg                                                                                        >  2:1339595/1‑101 (MQ=255)
                                                                                                           ccGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAgg                                                                                        <  1:1339595/101‑1 (MQ=255)
                                                                                                           ccGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAatat                                       <  2:330883/150‑1 (MQ=255)
                                                                                                               tATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCATCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGaa                                   <  1:632000/150‑1 (MQ=255)
                                                                                                                  tGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGGTGGAAAGGGACGACTACGGCGTCGATTTTCGTCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGa                                >  2:2126296/1‑150 (MQ=255)
                                                                                                                     aGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGAccc                             >  1:934404/1‑150 (MQ=255)
                                                                                                                        aaaTCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGc                          <  2:1010137/150‑1 (MQ=255)
                                                                                                                              aTCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAgg                    >  2:717767/1‑150 (MQ=255)
                                                                                                                              aTCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAgg                    >  1:2032390/1‑150 (MQ=255)
                                                                                                                              aTCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAgg                    <  1:717767/150‑1 (MQ=255)
                                                                                                                                   gccaaggccaGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGaa                                          <  2:28247/123‑1 (MQ=255)
                                                                                                                                   gccaaggccaGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGaa                                          >  1:28247/1‑123 (MQ=255)
                                                                                                                                     caaggccaGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACATTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAGGGAAGGGc             >  2:1333355/1‑150 (MQ=255)
                                                                                                                                      aaggccaGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAGGGAAGGGCa            >  2:159587/1‑150 (MQ=255)
                                                                                                                                                gTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAGGGAAGGGCATTGCTCGTCt  >  2:1638456/1‑150 (MQ=255)
                                                                                                                                                |                                                                                                                                                     
TACTGATGGGTGGGCATTTCACCCTTGGCGGTTGGGCCATGGTGATGCTGCACGATGATGCCCACGGGCTGGCGTTGAACCGCGACGGCGTGCGCGAACGCCGTATTCCGGTATTGCAGGAAATCGATCAGGCCAAGGCCAGGCGTTGGCTGAAGCTGTTGGAAAGGGACGACTACGGCGTCGATTTTCGGCGTTACAGTGCCGAAGGGCGGCCGCCCGGGTACCGTTACCCGTTTCTGGCGTCACCGGTCGAATATTGAATGACCCTGCTTGAGGGAAGGGCATTGCTCGTCT  >  NC_002947/2710282‑2710575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: