| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 310,002 | A→T | 5.7% | intergenic (‑167/+30) | PP_0255 ← / ← PP_0256 | hypothetical protein/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 310,002 | 0 | A | T | 5.7% | 245.7 / 4.6 | 85 | intergenic (‑167/+30) | PP_0255/PP_0256 | hypothetical protein/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (39/40); new base T (3/2); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 | |||||||||||
GAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCGGG > NC_002947/309859‑310149 | gAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCCGTCTGAGACCTTTATGACAAAGCCCTGAgccgcc > 2:339826/1‑150 (MQ=255) ggCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCAc < 2:641443/150‑1 (MQ=255) ggCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGACATGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCAc < 1:1780586/150‑1 (MQ=255) aaTTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGaa < 2:1119353/150‑1 (MQ=255) tttGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGACACTTTATCGTTTTCAAGCTGTCTGAGACCTTTAATACGATGCCCGGTGCCGCCACGGAAca > 2:1779731‑M2/1‑148 (MQ=255) cTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAAcagggcttt < 1:2257581‑M2/150‑10 (MQ=255) tAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCtttt > 1:1098456/1‑150 (MQ=255) aaGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCttttt > 2:1931906/1‑150 (MQ=255) aaGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCttttt > 2:431245/1‑150 (MQ=255) tggcAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTTCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAg < 2:2178510/150‑1 (MQ=255) tggcAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAg > 1:1188304/1‑150 (MQ=255) aaCGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTc < 1:263932/136‑1 (MQ=255) aaCGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATa < 1:1447654/150‑1 (MQ=255) aaCGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATa < 2:1188304/150‑1 (MQ=255) aaCGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTATAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTc > 2:263932/1‑136 (MQ=255) aCGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATAc < 2:1744347/150‑1 (MQ=255) aaaTCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGccc < 2:1993393/150‑1 (MQ=255) acgaGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTcg > 2:2083766/1‑150 (MQ=255) acacGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCAc > 2:484765/1‑150 (MQ=255) cacGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTaaa > 2:1824168/1‑125 (MQ=255) cacGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTaaa < 1:1824168/125‑1 (MQ=255) acGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTcagggctttgtcataaag < 1:870597‑M2/120‑19 (MQ=255) acGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTcagggctttgtcataaag > 2:870597‑M2/1‑102 (MQ=255) acGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAAcagggctttttcataaaggtctca < 1:1953287‑M2/126‑25 (MQ=255) acGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAAcagggctttttcataaaggtctca > 2:1953287‑M2/1‑102 (MQ=255) cGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCt > 1:1448068/1‑150 (MQ=255) gTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTcagggctttgtcataaaggtctcagacagc < 1:942598‑M2/128‑31 (MQ=255) gTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTcagggctttgtcataaaggtctcagacagc > 2:942598‑M2/1‑98 (MQ=255) gTACACAATTCTCTAACTTCCTGTATTTACTATGATACTTTATCGTTCCCACGCTGTCTGAGACGTTTCTGACCTGGCCCTGAGCCTCCACGCAACATGGCCTTGCTCGTTTCCAAAGGATACGCCCGTCCTCCAGCGCACGGCCCAGCt < 2:263770/150‑1 (MQ=255) tACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAACGGATACGCCCGTCCTCGCGCGCACGCTCCAGCtt < 2:1097913/150‑1 (MQ=255) cacaATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATATGCCCGTCCTCGCGCGCACGCTCCAGCTTGa > 1:2235525/1‑150 (MQ=255) cacaATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGa < 1:1931906/150‑1 (MQ=255) cacaATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCCGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGa < 1:339826/150‑1 (MQ=255) acaATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGAt > 2:1350828/1‑150 (MQ=255) caATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATg < 2:2119093/150‑1 (MQ=255) tAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATgg > 2:1941603/1‑143 (MQ=255) tAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATgg < 1:1941603/143‑1 (MQ=255) tGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCg < 1:1350828/150‑1 (MQ=255) tATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATa < 2:693941/99‑1 (MQ=255) tATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATa > 1:693941/1‑99 (MQ=255) tATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTc < 2:1448068/150‑1 (MQ=255) aTTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCTCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCg < 2:2257581/150‑1 (MQ=255) tATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTAt < 1:49207/150‑1 (MQ=255) aaCTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCg > 2:1029759/1‑139 (MQ=255) aaCTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCg < 1:1029759/139‑1 (MQ=255) tATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCAc < 2:987787/150‑1 (MQ=255) aTCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACg > 1:572648/1‑150 (MQ=255) gTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTAt > 1:1476048/1‑136 (MQ=255) gTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTAt < 2:1476048/136‑1 (MQ=255) ttttCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCaa > 2:1611276/1‑150 (MQ=255) ttCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGACGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATg > 1:530623/1‑150 (MQ=255) gCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCtctc > 1:1409892/1‑150 (MQ=255) cTGTCTGAGACTTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTTATCGTGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTcc < 2:1033986/150‑1 (MQ=255) tGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACt < 2:1179743/111‑1 (MQ=255) tGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACt > 1:1179743/1‑111 (MQ=255) tGTCTGAGACCTTTATGACAAAGCCATCCACCGCCACGGAACAGGGCTTTTTTCGGTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCa > 1:60966/1‑150 (MQ=255) tCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCAc > 1:2116103/1‑134 (MQ=255) tCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCAc < 2:2116103/134‑1 (MQ=255) tCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGc < 1:2083766/150‑1 (MQ=255) tCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGc > 1:1348139/1‑150 (MQ=255) gagaCCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCaa < 1:1984215/100‑1 (MQ=255) gagaCCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCaa > 2:1984215/1‑100 (MQ=255) gagaCCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGc > 1:1828591/1‑150 (MQ=255) aCCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGAt > 1:2142738/1‑108 (MQ=255) aCCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGAt < 2:2142738/108‑1 (MQ=255) tttATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGc < 1:1365649/118‑1 (MQ=255) tttATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGc > 2:1365649/1‑118 (MQ=255) gACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGtt > 2:1534414/1‑150 (MQ=255) gACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGtt > 1:1940786/1‑150 (MQ=255) gACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGtt < 1:484765/150‑1 (MQ=255) cAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATg > 2:1257312/1‑83 (MQ=255) cAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATg < 1:1257312/83‑1 (MQ=255) aaaGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCAc > 1:2090933/1‑150 (MQ=255) aaaGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCAc > 1:2091045/1‑150 (MQ=255) aaaGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGAGTATGGCTACCCACGCCAATGCTCTCCAGCGGAACCAGAGGGTTCAc > 2:1100975/1‑150 (MQ=255) aGCCCTGAGCCGCCACGGAAcagggctttgtcataaaggtctcagacagcctgaaaacgataaagtttcatagtaaatacagcaagttagagaattgtgtacaactcgtgttactcgtcggatttccgtt > 2:278082‑M2/1‑20 (MQ=255) aGCCCTGAGCCGCCACGGAAcagggctttgtcataaaggtctcagacagcctgaaaacgataaagtttcatagtaaatacagcaagttagagaattgtgtacaactcgtgttactcgtcggatttccgtt < 1:278082‑M2/130‑111 (MQ=255) aGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCt < 1:1534414/150‑1 (MQ=255) aGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCt > 2:739133/1‑150 (MQ=255) ccTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCg > 2:2090987/1‑150 (MQ=255) cTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCgg < 1:2090987/150‑1 (MQ=255) cTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGAGCACGCTCCAGCTTGATGGTAATGAACTTCGATATCGCCGTTCCTATAGCCACGCCAATACTGTCCAGCGGCACCAGCGGGTTCACCTCCgg > 2:61926/1‑150 (MQ=255) tGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCggg < 2:2091045/150‑1 (MQ=255) tGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCggg < 2:2090933/150‑1 (MQ=255) tGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTAATGGCAATGAACTTCGATGTCGGCGTATGGGTACCCACGCCAAGGCTCTCCAGCGGGACCAGCGGGTTCACCTCCggg > 1:12244/1‑150 (MQ=255) | GAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTTTTCGTTTTTAAAGGATACGCCCGTCCTCGCGCGCACGCTCCAGCTTGATGGCAATGAACTTCGATGTCGGCGTATGGCTACCCACGCCAATGCTCTCCAGCGGCACCAGCGGGTTCACCTCCGGG > NC_002947/309859‑310149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |