Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,238,190 T→A 6.3% S196T (TCC→ACC) ‡ PP_2836 → 2‑keto‑3‑deoxyxylonate dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,238,1900TA 6.3% 285.0 / 9.2 95S196T (TCC→ACC) ‡PP_28362‑keto‑3‑deoxyxylonate dehydratase
Reads supporting (aligned to +/- strand):  ref base T (39/50);  new base A (2/4);  total (41/54)
Fisher's exact test for biased strand distribution p-value = 6.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01

Only 100 of 102 total aligned reads displayed.

GCATCGGCGCCGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGG  >  NC_002947/3238041‑3238339
                                                                                                                                                     |                                                                                                                                                      
gCATCGGCGCCGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGt                                                                                                                                                        >  1:1762755/1‑150 (MQ=255)
      gcgcCGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCgg                                                                                                                                                  <  2:302850/150‑1 (MQ=255)
        gcCGACCTGGCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGtt                                                                                                                                                <  2:692207/150‑1 (MQ=255)
         ccGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTg                                                                                                                                               <  1:2150372/150‑1 (MQ=255)
         ccGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCGGACAGCGGTTg                                                                                                                                               <  2:1610457/150‑1 (MQ=255)
         ccGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCAACCGCGGACAGCGGTTgg                                                                                                                                              <  1:1306921/150‑1 (MQ=255)
          cGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCGGACAGCGGTTgg                                                                                                                                              <  1:910239/150‑1 (MQ=255)
           gACCTGTCGCAGATCGTGGCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCAACCGCGGACAGCGGTTgggc                                                                                                                                            <  2:481886/150‑3 (MQ=255)
                gTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACgg                                                                                                                                        <  2:1281382/150‑1 (MQ=255)
                       aTCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGAc                                                                                                                                >  1:34822/1‑150 (MQ=255)
                           tGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCg                                                                                                                            <  1:399187/150‑1 (MQ=255)
                              ccGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCa                                                                                                                         <  1:481656/150‑1 (MQ=255)
                               cggctcggctCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTAGCCACGGCGCCGACATCGGCAt                                                                                                                        <  1:343331/150‑1 (MQ=255)
                               cggctcggctCAGGACGCAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCAt                                                                                                                        >  2:1737108/1‑150 (MQ=255)
                                      gctcAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCAcccc                                                                                                                 <  2:742282/150‑1 (MQ=255)
                                         cAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGTAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAg                                                                                                              <  2:1033587/150‑1 (MQ=255)
                                           ggCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTc                                                                                                            >  1:366700/1‑150 (MQ=255)
                                               gAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGc                                                                                                        <  1:488026/150‑1 (MQ=255)
                                                aaGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCGGCGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCt                                                                                                       <  1:632924/150‑1 (MQ=255)
                                                  gcgcTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTgg                                                                                                     <  2:2203130/150‑1 (MQ=255)
                                                   cgcTCCGCAAGGTTCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGa                                                                                                    <  2:887198/150‑1 (MQ=255)
                                                    gcTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGTTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGaa                                                                                                   <  2:1762755/150‑1 (MQ=255)
                                                    gcTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGaa                                                                                                   <  1:412701/150‑1 (MQ=255)
                                                         gcAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAAcc                                                                                              >  2:462845/1‑150 (MQ=255)
                                                           aaGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGGTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCa                                                                                            <  2:1950296/150‑1 (MQ=255)
                                                              gTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCagag                                                                                         >  2:16360/1‑150 (MQ=255)
                                                                   ggTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACggaca                                                                                                                                     <  1:1412143/102‑4 (MQ=255)
                                                                   ggTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACggaca                                                                                                                                     >  2:1412143/1‑99 (MQ=255)
                                                                   ggTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCAAAGTCAAGATGGAACAGCTCAGGGTCGGa                                                                                    >  1:1646525/1‑150 (MQ=255)
                                                                    gTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGaa                                                                                   >  2:1169546/1‑150 (MQ=255)
                                                                       gagCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAgtg                                                                                <  1:2167808/150‑1 (MQ=255)
                                                                        ggCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAgtgg                                                                               <  2:1603431/149‑1 (MQ=255)
                                                                         gCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAgtggt                                                                              >  1:2277538/1‑150 (MQ=255)
                                                                         gCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAgtggt                                                                              >  2:2135304/1‑150 (MQ=255)
                                                                          cAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAgtggtg                                                                             <  1:1962861/150‑1 (MQ=255)
                                                                            gggCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCt                                                                           >  2:475327/1‑150 (MQ=255)
                                                                             ggCCTGTGGTCGCAGTACCTGGAGGTGGGTCTCGGCCCGGATACCGAAGGTTGCACCAACGGCCAACCGCTGTAAGACGCAGGCGCGACGCGGTACGTCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAACCGGAAGTGGTGCTg                                                                          >  1:2280934/1‑150 (MQ=255)
                                                                              gCCTGTGGTCGCAGTCCCTGGAGGTTGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTgg                                                                         <  2:529571/150‑1 (MQ=255)
                                                                              gCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCACGTCCAGCTGGACCAACCGTGAGCGGGAAGTGGAGCTgg                                                                         >  2:1540406/1‑150 (MQ=255)
                                                                              gCCTGTGGGCGCAGTATCTGGAGGTGGCTATCGGCGCTGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATTCACCCCAAGTTCAGCTGTAACAACCCAGAGCCTGAAGTGGTGCTgg                                                                         <  2:1646525/150‑1 (MQ=255)
                                                                                    ggTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCgtgt                                                                   <  1:1169546/150‑1 (MQ=255)
                                                                                    ggTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCgtgt                                                                   <  2:34822/150‑1 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGaacaac                                                                                               <  2:1157613/121‑1 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGaacaac                                                                                               >  1:1157613/1‑121 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGTTGCTAGCCGTGTc                                                                  >  1:1644566/1‑150 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGc                                                                        >  1:1000107/1‑144 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTc                                                                  <  2:2280934/150‑1 (MQ=255)
                                                                                     gTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTc                                                                  <  1:1459180/150‑1 (MQ=255)
                                                                                       ttcactACCTGGAGGTGGTTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                <  2:2245888/145‑1 (MQ=255)
                                                                                        gCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGATCACCGAGGTCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAg                                                               >  2:913897/1‑150 (MQ=255)
                                                                                        gCAGTACCCGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAg                                                               <  1:1737108/150‑1 (MQ=255)
                                                                                          aGTACCTGGAGGTGGGTATCGGCCCGGNTGCCGAAGTGTTNACCAAGNCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCa                                                             >  1:1635222/1‑150 (MQ=255)
                                                                                           gTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCaa                                                            >  1:2123206/1‑150 (MQ=255)
                                                                                            tACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAAt                                                           <  2:1178313/150‑1 (MQ=255)
                                                                                                tGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGgca                                                       <  1:2135304/150‑1 (MQ=255)
                                                                                                  gAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGgcagc                                                     <  1:442520/150‑1 (MQ=255)
                                                                                                     gTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATc                                                  >  1:134348/1‑150 (MQ=255)
                                                                                                       gggTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTACGCGGTTGGACAAGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCaa                                                >  2:1619869/1‑150 (MQ=255)
                                                                                                        ggTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCGCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAg                                               <  1:1540406/150‑1 (MQ=255)
                                                                                                        ggTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAg                                               <  2:2277538/150‑1 (MQ=255)
                                                                                                          tATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCgtgt                                                                   <  1:1955234/128‑1 (MQ=255)
                                                                                                          tATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCgtgt                                                                   >  2:1955234/1‑128 (MQ=255)
                                                                                                              ggCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTTGCAACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGTTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGcc                                         >  2:2244856/1‑150 (MQ=255)
                                                                                                                cccGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCAAAGTCCAGCTGGaacaac                                                                                               >  1:1899478/1‑94 (MQ=255)
                                                                                                                cccGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCAAAGTCCAGCTGGaacaac                                                                                               <  2:1899478/94‑1 (MQ=255)
                                                                                                                 ccGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGcc                                                                       >  1:367087/1‑117 (MQ=255)
                                                                                                                 ccGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGcc                                                                       <  2:367087/117‑1 (MQ=255)
                                                                                                                 ccGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATg                                      >  2:2002803/1‑150 (MQ=255)
                                                                                                                     aTGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCTCCATGCTCg                                  <  1:902740/150‑1 (MQ=255)
                                                                                                                     aTGCCGAAGTGTTCACCAAGGCCCAACCACTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCg                                  <  1:1845495/150‑1 (MQ=255)
                                                                                                                         cGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCaa                              >  1:36910/1‑150 (MQ=255)
                                                                                                                          gAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAg                                                                                  >  2:738654/1‑97 (MQ=255)
                                                                                                                          gAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAg                                                                                  <  1:738654/97‑1 (MQ=255)
                                                                                                                            aGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAacga                           <  2:366700/150‑1 (MQ=255)
                                                                                                                                ttCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTc                       >  2:47050/1‑150 (MQ=255)
                                                                                                                                ttCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTc                       >  1:691339/1‑150 (MQ=255)
                                                                                                                                   aCCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAAc                    >  1:1600073/1‑150 (MQ=255)
                                                                                                                                   aCCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAAc                    <  1:1084361/150‑1 (MQ=255)
                                                                                                                                    ccAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAAcc                   >  2:205063/1‑150 (MQ=255)
                                                                                                                                       aGGCCCAACCGCTGTCCGCGGTTGGCCCCGGCGACGCTAGCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCATCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTgc                <  2:1353096/150‑1 (MQ=255)
                                                                                                                                         gCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCg                                  <  2:971563/130‑1 (MQ=255)
                                                                                                                                         gCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCg                                  >  1:971563/1‑130 (MQ=255)
                                                                                                                                          gccAACCGCGGACAGCGGTTGGGCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGcgcg             >  1:1995608/2‑150 (MQ=255)
                                                                                                                                          gccAACCGCGGACAGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGcgcg             >  2:973119/2‑150 (MQ=255)
                                                                                                                                          cccAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAg                                                                                                         >  1:76691/1‑58 (MQ=255)
                                                                                                                                          cccAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAg                                                                                                         <  2:76691/58‑1 (MQ=255)
                                                                                                                                          cccAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGcgcg             >  2:377477/1‑150 (MQ=255)
                                                                                                                                           ccAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGa            >  1:1082222/1‑150 (MQ=255)
                                                                                                                                             aaCCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                >  2:2011868/1‑96 (MQ=255)
                                                                                                                                             aaCCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                <  1:2011868/96‑1 (MQ=255)
                                                                                                                                               ccGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACACCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTc        <  1:2113965/150‑1 (MQ=255)
                                                                                                                                                cGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCAcccc                                                                                                                 >  2:584321/1‑44 (MQ=255)
                                                                                                                                                cGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCAcccc                                                                                                                 <  1:584321/44‑1 (MQ=255)
                                                                                                                                                   tGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAg    >  1:799944/1‑150 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                <  2:1806956/88‑1 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                <  2:1806951/88‑1 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                >  1:1806956/1‑88 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGa                                                                >  1:1806951/1‑88 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAggg  >  2:1759557/1‑150 (MQ=255)
                                                                                                                                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAggg  <  2:1635222/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCATCGGCGCCGACCTGTCGCAGATCGTGCCCGGCTCGGCTCAGGCCGAAGCGCTGCGCAAGGTGCTGGTAGAGCAGGGCCTGTGGTCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGG  >  NC_002947/3238041‑3238339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: