| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,628,125 | C→G | 10.3% | intergenic (+11/‑129) | PP_3198 → / → PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,628,125 | 0 | C | G | 10.3% | 234.2 / 17.1 | 78 | intergenic (+11/‑129) | PP_3198/PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (34/36); new base G (4/4); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01 | |||||||||||
CTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAA > NC_002947/3627976‑3628270 | cTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgcc > 1:1145944/1‑150 (MQ=255) gCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCAATcgcgccgcgc < 2:1456018/150‑1 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgcc < 2:1732588/144‑1 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgcc > 1:1732588/1‑144 (MQ=255) cACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGAt < 2:423554/150‑1 (MQ=255) cGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAg < 1:239160/150‑1 (MQ=255) cgcgcTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGCCCTATCGCGCGGCGCGATAGGTcag < 1:224935/150‑3 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATccc > 2:1506504/1‑150 (MQ=255) aCGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAGGTca < 1:64450/141‑2 (MQ=255) aCGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAGGTca > 2:64450/1‑140 (MQ=255) aCGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCcgcg > 2:212080/1‑150 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTAGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGCTCGCTGACCTATCGCGCCGCGCGATAg > 2:551685/1‑135 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTAGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAg < 1:551685/135‑1 (MQ=255) aGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGAtt < 1:1342291/150‑1 (MQ=255) ttGCGTTCACGGCCCCTGCCGAGGCGAAACCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCACCCCGCGACGCGATTGGTCATGGa > 1:2067289/1‑150 (MQ=255) ggCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAgg > 1:1713436/1‑150 (MQ=255) gCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGc > 2:1879668/1‑150 (MQ=255) ccccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc > 2:772158/1‑143 (MQ=255) ccccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGgc < 1:772158/143‑1 (MQ=255) ccccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCg > 2:1506317/1‑150 (MQ=255) aGGCTAAGCCCTGGAGGCACTCTATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCGCGATCGCTGACCTATCGCGCCCCGCGTTATGTGGCAGCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt < 1:417618/150‑1 (MQ=255) aGGCGACGCCTTGGAGGCACTAGATCACAAGGAAGCGGGCGGCCGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt < 1:2089073/150‑1 (MQ=255) aGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt < 1:1177509/150‑1 (MQ=255) ggCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgtg < 1:382610/150‑1 (MQ=255) aaGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCCTa > 2:239015/1‑150 (MQ=255) aaGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATa < 1:1879668/150‑1 (MQ=255) aaGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATa > 1:839529/1‑150 (MQ=255) aGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGTTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAg < 1:212080/150‑1 (MQ=255) cTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGa < 1:902889/87‑1 (MQ=255) cTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGa > 2:902889/1‑87 (MQ=255) tGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcaca < 2:839529/150‑1 (MQ=255) cTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACgg > 2:2211852/1‑150 (MQ=255) cGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgcc < 2:1145944/150‑1 (MQ=255) tCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGCCCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgccgcc < 2:865074/150‑1 (MQ=255) acaAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGcccc > 2:2049681/1‑150 (MQ=255) caAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGc > 2:717240/1‑125 (MQ=255) caAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGc < 1:717240/125‑1 (MQ=255) aaGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGc > 2:1270668/1‑112 (MQ=255) aaGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGc < 1:1270668/112‑1 (MQ=255) aaGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑c > 2:363835/1‑150 (MQ=255) aaGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑c > 2:522255/1‑150 (MQ=255) gcgggcggCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACg < 1:2116988/150‑1 (MQ=255) cgggcggCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGAGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACgg > 1:1214445/1‑150 (MQ=255) gcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACggg > 2:828756/1‑148 (MQ=255) gcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACggg < 1:828756/148‑1 (MQ=255) gcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGgc < 2:1574641/150‑1 (MQ=255) gcggcTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGgc > 1:1403114/1‑150 (MQ=255) tggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CAt > 2:1426446/1‑137 (MQ=255) tggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CAt < 1:1426446/137‑1 (MQ=255) tggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGcaca > 2:1744451/1‑150 (MQ=255) ggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACggg < 2:601830/142‑1 (MQ=255) ggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACggg > 1:601830/1‑142 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCAcaacaa > 1:1463889/1‑150 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGACCCG‑CATGACGGGGCGCAcaacaa > 2:1363389/1‑150 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTAGCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCAcaacaa < 2:443576/150‑1 (MQ=255) gctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAg > 1:115856/1‑150 (MQ=255) gctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAg < 1:1535081/150‑1 (MQ=255) ttGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAg > 1:493176/1‑104 (MQ=255) ttGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAg < 2:493176/104‑1 (MQ=255) ttGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACa > 1:977240/1‑150 (MQ=255) ccccTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACaaaa < 1:2283034/147‑1 (MQ=255) ccGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACaaaa > 1:278020/1‑150 (MQ=255) cTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGt < 1:1506504/150‑1 (MQ=255) ttGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTg < 1:2211852/150‑1 (MQ=255) tGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTga < 1:723488/150‑1 (MQ=255) agcTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTTAGACAt < 1:1373885/150‑1 (MQ=255) gcTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATg > 1:731630/1‑150 (MQ=255) cTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGc < 2:115856/150‑1 (MQ=255) cTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCACCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGc < 2:2067289/150‑1 (MQ=255) cGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCa > 1:1489313/1‑150 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt < 1:1580220/150‑1 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt < 2:1713436/150‑1 (MQ=255) gACCTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACt > 1:1672678/1‑150 (MQ=255) aCCTATCGCGCGGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg > 2:2253746/1‑150 (MQ=255) cTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt > 2:1380615/1‑140 (MQ=255) cTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt < 1:1380615/140‑1 (MQ=255) cTATCGCGCCGCGCGATAGGTCGCATCCCGCCACGGGTCTGTCCAAAACCCAGCCCAGGCGGGAAGCTGTGTATTTTCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtgtg < 1:522255/150‑1 (MQ=255) tATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCt > 1:1633799/1‑67 (MQ=255) tATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCt < 2:1633799/67‑1 (MQ=255) tATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGTCATG‑CGGGgcggc > 1:1633073/1‑108 (MQ=255) tATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGTCATG‑CGGGgcggc < 2:1633073/110‑3 (MQ=255) tCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaac > 2:1179819/1‑150 (MQ=255) gcgccgcgcGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaacaa > 2:1370802/1‑150 (MQ=255) | CTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCGCATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAA > NC_002947/3627976‑3628270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |