| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,425,183 | G→C | 5.1% | intergenic (‑197/‑603) | PP_5647 ← / → PP_3917 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,425,183 | 0 | G | C | 5.1% | 310.3 / 5.2 | 95 | intergenic (‑197/‑603) | PP_5647/PP_3917 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (47/43); new base C (2/3); total (49/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
TCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCT > NC_002947/4425039‑4425328 | tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 1:1334581/1‑150 (MQ=255)tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 1:1334828/1‑150 (MQ=255) cATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggct < 2:1785919/150‑1 (MQ=255) tttCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCTCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctgg < 1:391167/150‑1 (MQ=255) cTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTGGCAAAAAGCCCAGCGCGGGGCTGGGCTTc > 1:1955657/1‑150 (MQ=255) ttAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGGGTGAGAAGTAGCAAAAAGCCCAGCCCCGCGCTGGGCtttt > 1:1874125/1‑148 (MQ=255) ttAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt < 2:241094/150‑1 (MQ=255) tAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCGCGCTGGGCttttt < 1:1325651/150‑4 (MQ=255) tAAATGCGACCGGTGGAAAATGACCGGCCCTCATTCTTGATGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCGCGCTGGGCttttt < 2:1874125/150‑4 (MQ=255) tGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTcag < 2:240512/150‑1 (MQ=255) gACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTcagcag > 2:115906/1‑150 (MQ=255) aCCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCaga < 2:1822371/150‑1 (MQ=255) aCCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCaga < 1:966508/150‑1 (MQ=255) gTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTc > 1:1154232/1‑136 (MQ=255) gTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTc < 2:1154232/136‑1 (MQ=255) gTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTc < 1:1324221/150‑1 (MQ=255) gTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTc > 1:2291973/1‑150 (MQ=255) gAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGAc < 1:115906/150‑1 (MQ=255) aaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCgcgctgggct > 2:2330559/1‑128 (MQ=255) aaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCgcgctgggct < 1:2330559/128‑1 (MQ=255) aTGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt > 1:2176826/1‑130 (MQ=255) aTGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt < 2:2176826/130‑1 (MQ=255) aTGATCGGCCCTAATCCTTGCTGATAGACCTC‑GCGCGTTGAGGTCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGa < 2:776402/150‑1 (MQ=255) tCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg > 2:1570752/1‑119 (MQ=255) tCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg < 1:1570752/119‑1 (MQ=255) tCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCa > 2:1470737/1‑150 (MQ=255) gCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCg > 1:1824961/1‑150 (MQ=255) cTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTg < 1:117483/121‑1 (MQ=255) cTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTg > 2:117483/1‑121 (MQ=255) cTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTc > 1:2337129/1‑150 (MQ=255) aaTCCTTGCTGGTAGGTATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCaa > 2:1842254/1‑150 (MQ=255) aaTCCTTGCTGATAGATATCATCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGa < 1:2181996/133‑1 (MQ=255) aaTCCTTGCTGATAGATATCATCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGa > 2:2181996/1‑133 (MQ=255) tCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAAtt > 1:1664751/1‑150 (MQ=255) cTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGc < 1:1806530/140‑1 (MQ=255) cTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGc > 2:1806530/1‑140 (MQ=255) tGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg > 2:1524354/1‑102 (MQ=255) tGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg < 1:1524354/102‑1 (MQ=255) gatagataTCAGCG‑GGACAGCGCCCGTCGAGCAACGA‑CATGGTCACAATGTTCTGCCCATCAGACAGAAGAGCGAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGAGTATACTCAGCGTTCAATTACGCTTgg > 1:405712/1‑150 (MQ=255) tagataTCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCATACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTa < 1:1865813/124‑1 (MQ=255) tagataTCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCATACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTa > 2:1865813/1‑124 (MQ=255) gataTCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGc < 2:1334581/150‑1 (MQ=255) gataTCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCCCGACTAGACTCAGCGTTCAATTACGCTTGGCAGc < 2:1334828/150‑1 (MQ=255) tatCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTAAATTACGCTTGGCAGCTa > 2:426357/1‑150 (MQ=255) aGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTcc > 2:600959/1‑150 (MQ=255) gCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGTTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCa > 2:680095/1‑150 (MQ=255) gCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTca < 2:904268/101‑1 (MQ=255) gCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTca > 1:904268/1‑101 (MQ=255) ggACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATg > 1:1631785/1‑150 (MQ=255) gACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATgg < 1:1470737/150‑1 (MQ=255) gACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATgg < 1:1842254/150‑1 (MQ=255) aCAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAAt > 1:534001/1‑147 (MQ=255) aCAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAAt < 2:534001/147‑1 (MQ=255) cAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt > 1:1696946/1‑150 (MQ=255) gTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGa < 1:426357/150‑1 (MQ=255) agagAACCGAGCCCGATCACTGAGCCC‑GAACAGCAGACAGAAGCTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATa < 2:1549206/150‑1 (MQ=255) gagaACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 2:169962/1‑70 (MQ=255) gagaACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg < 1:169962/70‑1 (MQ=255) gagaACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 1:1603471/1‑150 (MQ=255) gagaACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 1:2048425/1‑150 (MQ=255) aaCCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGgcgc < 1:1838974/138‑1 (MQ=255) aaCCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGgcgc > 2:1838974/1‑138 (MQ=255) aaCCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCta < 2:1571198/150‑1 (MQ=255) cGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg < 2:2291973/150‑1 (MQ=255) cGATCACTGAGCAA‑GTACAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg > 2:2322756/1‑150 (MQ=255) cGATCACTGAGACC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg > 1:2167153/1‑150 (MQ=255) gATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg < 2:2283499/137‑1 (MQ=255) gATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 1:2283499/1‑137 (MQ=255) gATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCta > 2:1303253/1‑140 (MQ=255) gATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCta < 1:1303253/140‑1 (MQ=255) gATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCgg > 2:1448540/1‑150 (MQ=255) tCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCa > 1:539188/1‑150 (MQ=255) aCTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCAtt < 1:600959/150‑1 (MQ=255) aGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGAt > 1:2094201/1‑150 (MQ=255) gCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATg > 1:2048284/1‑150 (MQ=255) ccc‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGc < 2:1057707/150‑1 (MQ=255) tCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGTTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTc < 1:680095/150‑1 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGa > 2:1945031/1‑66 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGa < 1:1945031/66‑1 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg < 2:581432/139‑1 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg > 1:581432/1‑139 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGa > 1:471507/1‑150 (MQ=255) gcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATg > 2:1054837/1‑150 (MQ=255) agacagaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATggg > 1:1724696/1‑150 (MQ=255) aaGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCCGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg < 2:316682/123‑1 (MQ=255) aaGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg > 1:316682/1‑123 (MQ=255) ttCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTggg > 2:2042722/1‑150 (MQ=255) tAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCAGTGGATGCCCTCGATGGGTCCGGTGGGCCTTGt < 1:1448540/150‑1 (MQ=255) gCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGttt < 2:2048284/150‑1 (MQ=255) gCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGttt < 1:1054837/150‑1 (MQ=255) aaaaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTcc < 2:1603471/150‑2 (MQ=255) aaaaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCt > 1:1140247/1‑150 (MQ=255) aaaaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCt < 2:1724696/150‑1 (MQ=255) agcccagcccCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTATAATAGCGATGTCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgcgc > 2:901587/1‑150 (MQ=38) ccAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGcc < 2:1824961/150‑1 (MQ=255) cAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCt > 1:892481/1‑150 (MQ=255) | TCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCG‑GGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCC‑GTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCT > NC_002947/4425039‑4425328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |