| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,826,672 | G→A | 6.2% | L1521L (CTC→CTT) | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,826,672 | 0 | G | A | 6.2% | 420.7 / 10.7 | 140 | L1521L (CTC→CTT) | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base G (73/58); new base A (4/5); total (77/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
CTGCCACTGTAATAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGG > NC_002947/4826526‑4826819 | atctcACTGTAATAGCCGCCCAGTAGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGACCGTTCTCCGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGCTCGAgg < 1:1574276/146‑1 (MQ=255) ccACTGTAATAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg < 1:823952/150‑1 (MQ=255) ccACTGTAATAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCAACCAAGCAGCCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg > 1:1694228/1‑150 (MQ=255) gTAATAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAg < 1:1747037/150‑1 (MQ=255) aTAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGCCCTGAACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTa > 2:661950/1‑150 (MQ=255) cGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCa > 1:620960/1‑150 (MQ=255) gACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAg < 2:1035704/150‑1 (MQ=255) gACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAg > 2:1150091/1‑150 (MQ=255) aCCAGTTGCGCACCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAgg < 1:1063061/150‑1 (MQ=255) gcgcCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTCGACCAGCAGGTCAAggt < 2:258153/124‑2 (MQ=255) ccAATGGCGTCCTTGTGCATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGa > 2:1190301/1‑150 (MQ=255) cAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg > 1:620217/1‑122 (MQ=255) cAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg < 2:620217/122‑1 (MQ=255) cAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGaa > 1:2312325/1‑150 (MQ=255) aaTGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAAc < 1:1150091/150‑1 (MQ=255) cTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCg > 2:1810939/1‑150 (MQ=255) ttGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCgg > 2:1698415/1‑150 (MQ=255) aTCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCGAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGa < 2:1694228/150‑1 (MQ=255) aTCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGa < 2:183911/150‑1 (MQ=255) tCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGAt > 1:1825431/1‑150 (MQ=255) cAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGgcg > 2:1940450/1‑145 (MQ=255) cAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGgcg < 1:1940450/145‑1 (MQ=255) cAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATc < 2:1900687/150‑1 (MQ=255) gCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAg < 1:1690581/106‑1 (MQ=255) gCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAg > 2:1690581/1‑106 (MQ=255) gCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGAgcgc > 1:347129/1‑150 (MQ=255) gCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCCGCCGAACCTAGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGCCGTCGAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGc > 1:2176137/1‑150 (MQ=255) aCCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCa > 1:1031792/1‑150 (MQ=255) aCCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCa < 2:1747064/150‑1 (MQ=255) aCCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCa > 1:1060727/1‑150 (MQ=255) cAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACt > 1:2048944/1‑150 (MQ=255) cAGCGCCTGGTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACt > 2:2144429/1‑150 (MQ=255) aGCGCCTGTTCCACACCCGCCTGTTCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTACTGGTCGAGGCGGCCAAGGTATTTCAGGGCCTCCAGCTGAACCTGCCAGAGGGCGCGATCGCAACTg > 2:1070379/1‑150 (MQ=255) aGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTCGACCAGCAGGTCAAggt > 1:1011397/1‑93 (MQ=255) aGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTCGACCAGCAGGTCAAggt < 2:1011397/94‑2 (MQ=255) gcgcCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGc > 2:377339/1‑150 (MQ=255) gcgcCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGc > 2:1524615/1‑150 (MQ=255) ccTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGt < 1:1689226/150‑1 (MQ=255) gTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACa > 1:1633729/1‑150 (MQ=255) ccACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCACGAGCTATGAGGGCCTCCAGCTGAACCTGCCGTCGTGCGCGGTCGCCACTGCGGTACAGAc > 1:1778878/1‑150 (MQ=255) ccACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGAc < 2:1060727/150‑1 (MQ=255) acacCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGc > 1:378308/1‑150 (MQ=255) ccGCCTGTGCCAGCAGGCAGGGCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGAc < 1:1360080/150‑1 (MQ=255) ccGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGAc > 2:1242070/1‑150 (MQ=255) ccGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCCCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGAc < 2:1288911/150‑1 (MQ=255) ccGCCTCTGCCAGCAAAAAAGCCTGCACATCCTCGAGCTCGACCCGGCAACCGCGCAACTTGACCTGCTGGTCGAGACGGCAAAGGTATTCCAGGGCCTACAGCTGAACCTGACAGCGGACACGATCGCCACTGCGGTACAGAcaatgaa > 2:482701/1‑144 (MQ=255) cTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCAtt < 2:1839734/150‑1 (MQ=255) tgtgCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg > 2:2187322/1‑75 (MQ=255) tgtgCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAggcgg < 1:2187322/75‑1 (MQ=255) tgtgCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTg > 2:271927/1‑150 (MQ=255) gtgCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGc < 2:1031792/150‑1 (MQ=255) gcaggcagGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTa > 2:1644780/1‑127 (MQ=255) gcaggcagGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTa < 1:1644780/127‑1 (MQ=255) gcaggcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAg < 1:910314/69‑1 (MQ=255) gcaggcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAg > 2:973284/1‑69 (MQ=255) gcaggcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTg > 1:1471606/1‑150 (MQ=255) aggcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTggg < 1:1475311/150‑1 (MQ=255) aggcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTggg < 2:887764/150‑1 (MQ=255) gcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGcc < 2:1136896/78‑1 (MQ=255) gcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGcc > 1:1136896/1‑78 (MQ=255) gcCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGTCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGCCGATGACCATTGCCGTCGGCCTCGGGt > 2:449709/1‑150 (MQ=255) tGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACg > 1:1980281/1‑150 (MQ=255) gCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTgg > 1:1391662/1‑143 (MQ=255) gCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTgg < 2:1391662/143‑1 (MQ=255) cACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTc < 2:739655/75‑1 (MQ=255) aCTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCt < 1:426438/79‑1 (MQ=255) aCTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAg > 2:723483/1‑150 (MQ=255) cTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAgc < 1:1764582/150‑1 (MQ=255) cTCGGGCTCTACGCGGAAACCGCGCACCTTGACCCGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTc < 2:1588088/150‑1 (MQ=255) tCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCg > 1:767442/1‑150 (MQ=255) cGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCgg < 1:1038791/150‑1 (MQ=255) ggCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCa < 2:887488/150‑1 (MQ=255) cGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGa < 2:1980281/150‑1 (MQ=255) gcgGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCg > 2:951789/1‑118 (MQ=255) gcgGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCg < 1:951789/118‑1 (MQ=255) aaaCCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCgggg < 2:1471606/150‑1 (MQ=255) aCCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCg < 1:1493018/112‑1 (MQ=255) aCCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCg > 2:1493018/1‑112 (MQ=255) aCCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGggcg < 2:620960/150‑1 (MQ=255) cgcgCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGc > 1:720058/1‑95 (MQ=255) cgcgCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGTCCTGTGGTACGAAGCGCTCGGCAGTGAGGCCGGggcggc < 1:449709/150‑1 (MQ=255) gcgcACCTTGACCTGCTGGTCGAGGCGACCAAGGTATTCAAGGGCCTCCAGCTGAACCTGCCAGCGGGCGAGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGGCTGGGGTACGAAGCGCTCGGCAGAGAGGGGGGgggggcg > 1:1129486/1‑149 (MQ=255) cACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCaa < 1:723483/150‑1 (MQ=255) cTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTa < 1:1518104/150‑1 (MQ=255) cTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTa > 1:812639/1‑150 (MQ=255) cTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTa > 2:780823/1‑150 (MQ=255) cTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTa > 2:1411217/1‑150 (MQ=255) gACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAAcc > 1:49137/1‑150 (MQ=255) aCCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGa > 2:1358613/1‑87 (MQ=255) aCCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGa < 1:1358613/87‑1 (MQ=255) aCCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCa < 2:1488914/150‑1 (MQ=255) ctgctgGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTg < 1:603754/91‑1 (MQ=255) ctgctgGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACg < 1:21930/150‑1 (MQ=255) tgctgGGCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACgg > 2:2144228/1‑150 (MQ=255) gcaggTCAAGGTGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAg < 2:1250091/121‑1 (MQ=255) gcaggTCAAGGTGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAg > 1:1250091/4‑124 (MQ=255) ctgGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGTACCCGGGGCGGCCCAAGTAACCACGGGc < 1:1230357/150‑1 (MQ=255) gTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAg > 1:2258607/1‑150 (MQ=255) gTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAg < 2:2312325/150‑1 (MQ=255) tCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAgg > 2:2682/1‑150 (MQ=255) | CTGCCACTGTAATAGCCGACCAGTTGCGCGCCAATGGCGTCCTTGTGTATCAGCACCAGCGCCTGTTCCACACCCGCCTGTGCCAGCAGGCAGGCCTGCACTTCCTCGGGCTCGACGCGGAAACCGCGCACCTTGACCTGCTGGTCGAGGCGGCCAAGGTATTCCAGGGCCTCCAGCTGAACCTGCCAGCGGGCGCGATCGCCACTGCGGTACAGACGCTGACCATTGCCGTCGGCCTGGGGTACGAAGCGCTCGGCAGTGAGGCCGGGGCGGCCCAAGTAACCACGGGCCAGG > NC_002947/4826526‑4826819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |