| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,909,966 | C→G | 8.3% | intergenic (+314/+165) | PP_4318 → / ← PP_4319 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,909,966 | 0 | C | G | 8.3% | 243.6 / 9.7 | 84 | intergenic (+314/+165) | PP_4318/PP_4319 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (38/39); new base G (4/3); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
CCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCA > NC_002947/4909818‑4910115 | ccTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCTGGGTTCCCTCGATAGGGTCGTTCTCCCGGGAGTACGCGCTGCAGGCCccatcc > 2:1353659/1‑150 (MQ=11)ccTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCccatcc > 1:647194/1‑150 (MQ=38)ccTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCccatcc < 1:716584/150‑1 (MQ=38) cTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGGGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGCTTGCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCccatcca > 1:1895846/1‑150 (MQ=255) cGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTGCGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATgggg < 2:1618070/150‑1 (MQ=18) gCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGGGTACGCGCTGCAGGCCCCATCCATGGGGc > 1:488959/1‑150 (MQ=17) gCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGc < 2:75685/150‑1 (MQ=32) gCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGc > 1:996137/1‑150 (MQ=32) cggGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCtt < 2:1941960/150‑1 (MQ=32) ggTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGa < 2:1911360/150‑1 (MQ=32) tttGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATc < 2:647194/150‑1 (MQ=32) tCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATc > 1:1190097/1‑146 (MQ=32) tCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATc < 2:1190097/146‑1 (MQ=32) aaaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGcc > 2:87191/1‑150 (MQ=32) aaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTTCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGGACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGAATCCATGccc > 1:1120992/1‑150 (MQ=12) aaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGccc > 1:1467003/1‑150 (MQ=32) gcgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTc < 1:2258347/150‑1 (MQ=32) aaaaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTG‑AGGCCCCATGGATGGGGCCtgcagc > 1:58400/1‑116 (MQ=11) aaaaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTG‑AGGCCCCATGGATGGGGCCtgcagc < 2:58400/121‑6 (MQ=11) tAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGGGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCg < 2:488959/150‑1 (MQ=25) tAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCg < 2:1406795/150‑1 (MQ=34) aaCCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGc > 1:935169/1‑150 (MQ=35) ccAAAAACCGCTGACCCCTAGCATCCGGCCCCTGCGCGACGCTCCGGGGTGCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCaa < 2:450865/150‑1 (MQ=11) cAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCccatccat < 2:1521993/100‑1 (MQ=34) cAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCccatccat > 1:1521993/1‑100 (MQ=34) aaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCtt > 1:123631/1‑110 (MQ=33) aaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCtt < 2:123631/110‑1 (MQ=33) aCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTgc < 1:2018583/150‑1 (MQ=38) tGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTc > 1:1362389/1‑150 (MQ=38) tCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCtg > 1:1264553/1‑93 (MQ=18) tCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCtg < 2:1264553/94‑2 (MQ=21) tATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACgg > 2:329311/1‑103 (MQ=11) tATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACgg < 1:329311/103‑1 (MQ=11) cGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTc < 2:996137/150‑1 (MQ=39) ccTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAAt > 1:74065/1‑150 (MQ=38) cgcTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGc < 2:1467003/150‑1 (MQ=39) gcTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCg > 1:2131854/1‑150 (MQ=39) tACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTc > 1:88416/1‑150 (MQ=38) tACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTc > 2:797991/1‑150 (MQ=39) cGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGc < 1:1049398/150‑1 (MQ=39) gCTCCTGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCACTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGcc < 1:1353659/150‑1 (MQ=255) tCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTg > 2:834656/1‑150 (MQ=39) cGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGaa < 1:2322025/150‑1 (MQ=39) ggTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTa < 2:2131854/150‑1 (MQ=39) gTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTAc > 2:377219/1‑150 (MQ=38) ttCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTAcc > 1:197930/1‑150 (MQ=40) cTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGc > 1:565175/1‑111 (MQ=38) cTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGc < 2:565175/111‑1 (MQ=38) tCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcgcg > 2:1719541/1‑150 (MQ=40) tACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCaa < 2:2126121/121‑1 (MQ=40) tACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCaa > 1:2126121/1‑121 (MQ=40) tACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTa > 1:1670244/1‑150 (MQ=255) ggTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACaa > 1:1864200/1‑150 (MQ=255) ggTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACaa < 1:1719541/150‑1 (MQ=255) ggTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACaa < 2:1864200/150‑1 (MQ=255) ggTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCATTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACaa < 1:991831/150‑1 (MQ=255) tCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTGCCGCGCGCTTACAAGc > 1:1398223/1‑150 (MQ=255) tCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGc < 1:957414/150‑1 (MQ=255) tCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGc > 1:1217953/1‑150 (MQ=255) ttGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCaa > 1:18731/1‑150 (MQ=255) tGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGTCTGAACTACCGCGCGCTTACAAGCaaa > 1:784905/1‑150 (MQ=255) tGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACCGACAGGCAGGCCCGTCAAGTCCCTTCTCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCaca > 1:2037240/1‑148 (MQ=14) cTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCATGAACTACCGCGCGCTTACAAGCAAaag < 1:2176827/150‑1 (MQ=255) ccGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTAcc < 2:1891156/128‑1 (MQ=39) ccGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTAcc > 1:1891156/1‑128 (MQ=38) ccGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcag > 2:2037886/1‑150 (MQ=255) ccGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcag < 1:797991/150‑1 (MQ=255) ccGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATAAATCCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcag < 1:614461/150‑1 (MQ=255) gggAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaa > 2:1230767/1‑150 (MQ=255) gggAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaa < 2:1217953/150‑1 (MQ=255) ggAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaag < 1:377219/150‑1 (MQ=255) ccgtcaagcgcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCGTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaag > 1:2010236/8‑150 (MQ=17) aGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATCCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagca > 2:543672/1‑150 (MQ=255) aCGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaa < 1:2037886/150‑1 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagc > 1:496267/1‑150 (MQ=255) tGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTc < 2:2020841/76‑1 (MQ=35) tGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTc > 1:2020841/1‑76 (MQ=34) gCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagc < 1:533843/139‑1 (MQ=255) gCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagc > 2:533843/1‑139 (MQ=255) cAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagc < 2:2037240/150‑1 (MQ=255) ggCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag < 1:1878209/150‑1 (MQ=255) gCCCCATGGATGGGGCCT‑GAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgc < 2:1830211/111‑1 (MQ=255) gCCCCATGGATGGGGCCT‑GAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgc > 1:1830211/1‑111 (MQ=255) gCCCCATGGATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAg < 1:119249/122‑1 (MQ=255) gCCCCATGGATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAg > 2:119249/1‑122 (MQ=255) gCCCCATCCATGGGTCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagc > 2:198394/1‑150 (MQ=255) gCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcaga > 2:1418848/1‑132 (MQ=255) gCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcaga < 1:1418848/132‑1 (MQ=255) gCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagc > 2:1232768/1‑150 (MQ=255) cccATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcag < 2:74065/150‑1 (MQ=255) ccatccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcaga > 1:867140/1‑150 (MQ=255) ccatccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcaga < 2:935169/150‑1 (MQ=255) atccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag < 2:750091/144‑1 (MQ=255) atccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag > 1:750091/1‑144 (MQ=255) atccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcagaag < 2:898964/150‑1 (MQ=255) ccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGACTCCGAAAGGCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAgcagaagcagcagaagca < 2:1355462/150‑1 (MQ=17) | CCTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGAGTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAGAAGCA > NC_002947/4909818‑4910115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |