Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,883,651 | C→G | 5.3% | A60G (GCC→GGC) | PP_5157 → | hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,883,651 | 0 | C | G | 5.3% | 303.3 / 7.3 | 95 | A60G (GCC→GGC) | PP_5157 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base C (56/33); new base G (3/2); total (59/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.02e-01 |
CTGATCAGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCTCGATGTAAGCCTGC > NC_002947/5883506‑5883800 | cTGATCAGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTg > 1:1626578/1‑150 (MQ=255) tGATCAGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACAGAGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTgg < 1:1676484/150‑1 (MQ=255) aTCAGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGGCCTGGcc > 1:2002556/1‑150 (MQ=255) cAGTCCATTGGCTCAGGCAGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGACGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGCGAAGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCaa > 1:1995078/1‑150 (MQ=255) aGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGGCCTGGCCaaa < 2:2002556/150‑2 (MQ=255) tCCATTGGCTCATGCGGAGCTTAGCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGACTTTGGCCAGGCCCTGGCCAAGGa > 2:97358/1‑150 (MQ=255) tCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGa > 2:2117534/1‑150 (MQ=255) cATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAAc < 2:705258/150‑1 (MQ=255) ggCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAACACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGa < 1:1848739/150‑1 (MQ=255) ggCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTgcg > 2:359587/1‑150 (MQ=255) gCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAg > 2:28091/1‑135 (MQ=255) gCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAg < 1:28091/135‑1 (MQ=255) aGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCg > 2:1180585/1‑150 (MQ=255) gCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGa > 1:1178410/1‑150 (MQ=255) cgacgaAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTtcgt > 2:1952798/1‑150 (MQ=255) gacgaAATCGCAGACCAGCGCGAGCTGCTCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTtcgtc > 2:1375387/1‑150 (MQ=255) cgaAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTgc < 2:2063992/134‑1 (MQ=255) cgaAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTgc > 1:2063992/1‑134 (MQ=255) aaTCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGc > 2:2226044/1‑150 (MQ=255) gCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGCCGACCACCTGGCAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCg > 1:350836/1‑150 (MQ=255) gCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCg > 1:1178051/1‑150 (MQ=255) ccGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCgg < 1:1952798/150‑1 (MQ=255) ccGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCgg < 1:359587/150‑1 (MQ=255) ggCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGaa > 2:1464507/1‑150 (MQ=255) ggCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTCGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGaa > 2:145480/1‑150 (MQ=255) cGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGt < 2:1178051/150‑1 (MQ=255) gAACTGCGCATTGCCGTACAGGCCGACAGCACGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCATGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTg > 1:1815058/1‑150 (MQ=255) cTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTg > 2:1521875/1‑150 (MQ=255) aTTGCCGTACAGGCCGCGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGAT‑‑TCGACATCGAATTTAGCCAGGCCCTGGCCAAGGAACTGCATTTGAGCGCCAAATTCGTCGACGCCCCGGCTGCCGAACTGCTAGCgggg > 2:287904/1‑149 (MQ=255) aTTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCAGAATTCGTCTAAGCCCCGGCTACCGAAGTGCTGGCGGgt > 2:1937682/1‑150 (MQ=255) ttGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGgtg < 1:2226044/150‑1 (MQ=255) gCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACG‑CCAAC‑GACACCTTGCTCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCTTGTTCGTCGAAGCCCCGGCTACCGACGTGCTGTCggcgttg < 2:652820/150‑6 (MQ=255) tACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCgaga > 1:415334/1‑150 (MQ=255) tACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCCAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCgaga < 1:1937682/150‑1 (MQ=255) gCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGa > 2:1234399/1‑101 (MQ=255) gCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGa < 1:1234399/101‑1 (MQ=255) gCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGc > 2:929127/1‑150 (MQ=255) gagaACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAg > 2:18270/1‑150 (MQ=255) gagaACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAg < 2:170043/150‑1 (MQ=255) agaACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCt > 2:2195369/1‑127 (MQ=255) agaACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCt < 1:2195369/127‑1 (MQ=255) gaACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTa < 1:18270/150‑1 (MQ=255) cTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAg > 2:1690500/1‑73 (MQ=255) cTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAg < 1:1690500/73‑1 (MQ=255) cTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGGCGAGTTGGTCGAAGCCCCGGCTACCGAAGTTCTGGCGGGTGTCGAGGGGGGAAAGTACGa > 2:876512/1‑150 (MQ=255) cTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGa > 1:1202139/1‑150 (MQ=255) tCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCACGGAACTGGATTTGCGCGCCGAGTTCGTCGAATCCACGGCTACCGAAATGATGGTCGGTGTCGAGGTTGACCAGCACGAc > 2:1082239/1‑150 (MQ=255) tCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCg > 1:1915282/1‑126 (MQ=255) tCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCg < 2:1915282/126‑1 (MQ=255) tCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGAc > 1:147349/1‑150 (MQ=255) cATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCTCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGTCGGGTGTCGAGTGTGGCAAGTACGACCTCg > 2:1654348/1‑150 (MQ=255) aCGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTAc < 1:1304042/140‑1 (MQ=255) aCGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTAc > 2:1304042/1‑140 (MQ=255) cGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCAtt < 2:1531412/150‑1 (MQ=255) ccTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGcccc < 1:821956/97‑1 (MQ=255) ccTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGcccc > 2:821956/1‑97 (MQ=255) cTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGACCGGGATTTGCGCGCCGAGTTCGTCGAAGCCGCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGAGATCGCATTCAc > 2:408090/1‑150 (MQ=255) cTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGaa < 1:1259474/106‑1 (MQ=255) cTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGaa > 2:1259474/1‑106 (MQ=255) ttCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCAcc > 1:364638/1‑150 (MQ=255) caagcaagACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCAcccc > 1:1774359/1‑150 (MQ=255) aagcaagACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCg > 1:265107/1‑150 (MQ=255) gcaagACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTc > 1:948028/1‑150 (MQ=255) aagACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGa < 1:678311/150‑1 (MQ=255) agACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAg > 1:1838659/1‑150 (MQ=255) gacgacCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGt < 2:415334/150‑1 (MQ=255) gacgacCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGt > 1:887627/1‑150 (MQ=255) gacCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGACCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGaa < 1:1654348/150‑1 (MQ=255) accaccTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGc > 2:884903/1‑79 (MQ=255) accaccTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGc < 1:884903/79‑1 (MQ=255) caccTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCg > 1:2140514/1‑150 (MQ=255) accTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGc < 2:2140514/150‑1 (MQ=255) cTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTc > 1:102120/1‑150 (MQ=255) tGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCGAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTca > 2:2257122/1‑150 (MQ=255) gTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTca > 1:1906930/1‑144 (MQ=255) gTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTca < 2:1906930/144‑1 (MQ=255) tCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACg < 1:2117534/150‑1 (MQ=255) tCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACg < 2:147349/150‑1 (MQ=255) gACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGTGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGc > 2:2226632/1‑150 (MQ=255) gACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGc < 2:364638/150‑1 (MQ=255) aTCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCgg > 2:199514/1‑82 (MQ=255) aTCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCgg < 1:199514/82‑1 (MQ=255) aTCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCg > 2:137855/1‑150 (MQ=255) aTCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGCCGGCGGCCCg > 2:285258/1‑150 (MQ=255) tCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTg < 2:1814051/74‑1 (MQ=255) tCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTg > 1:1814051/1‑74 (MQ=255) tCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTca > 1:1965505/1‑135 (MQ=255) tCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTca < 2:1965505/135‑1 (MQ=255) tCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGGGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGc > 2:168115/1‑150 (MQ=255) agttccttGGCCAGGGCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGc > 1:1680858/7‑150 (MQ=255) cGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCt < 2:102120/150‑1 (MQ=255) gCCAGGGCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCAccc < 2:1516610/108‑1 (MQ=255) gCCAGGGCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCAccc > 1:1516610/1‑108 (MQ=255) cAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCTCGATGTAAGc > 1:805057/1‑150 (MQ=255) cAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCAACCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCTCGATGTAAGc > 1:253400/1‑150 (MQ=255) cccTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCATCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCTCGATGTAAGCCTGc < 2:1178410/150‑1 (MQ=255) | CTGATCAGTCCATTGGCTCAGGCGGAGCTGATCGACGAAATCGCCGACCGGGGCGAACTGCGCATTGCCGTACAGGCCGAGAACTCGCCATACGCCTTCAAGCAAGACGACCACCTGACAGGTT‑‑TCGACATCGAATTTGGCCAGGCCCTGGCCAAGGAACTGGATTTGCGCGCCGAGTTCGTCGAAGCCCCGGCTACCGAAGTGCTGGCGGGTGTCGAGAGTGGCAAGTACGACATCGCATTCACCCCGTCGAGTGAATCGCTCACAGGCGACGGCCCGCTCGATGTAAGCCTGC > NC_002947/5883506‑5883800 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |