| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 524,339 | A→G | 5.5% | intergenic (+203/‑613) | tyrS → / → PP_16SC | tyrosine‑‑tRNA ligase/16S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 524,339 | 0 | A | G | 5.5% | 262.1 / 2.6 | 85 | intergenic (+203/‑613) | tyrS/PP_16SC | tyrosine‑‑tRNA ligase/16S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (40/40); new base G (2/3); total (42/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-01 | |||||||||||
TTGTTTTTGGGGTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTTATAATGCGC > NC_002947/524191‑524487 | ttGTTTTTGGGGTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGaaa > 2:1523421/1‑150 (MQ=255) gTTTTTGGAGGTTGGTGGTTGCTGTTGGAGGGGGAGGGCGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCTCGACAACTCTTGCAGC‑‑GCCTGTGAGATCGGGCGCCCCCCGCGTCCGGCTTGATACATTCACCGCGTAGGAAAcc < 2:397478/150‑1 (MQ=21) ttttGGGGTTTGGCAGTTGCAGACATACGGTTAGTGTGCTGTTTTGAGAGGGTGTTGGCGGTGAGACTATG‑GCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGa < 1:1796323/150‑1 (MQ=21) ggggTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAgcgc > 2:370491/1‑150 (MQ=255) gggTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGANGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCAACCGCCGGCTTGAGACATTCACCGCCTATGAAACCGAGcgcc > 1:23407/1‑150 (MQ=255) gTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGcgccgc > 2:729704/1‑150 (MQ=255) gtggtTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCgcggg > 2:3360/1‑150 (MQ=255) gtggtTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCgcggg < 1:2077953/150‑1 (MQ=255) gtggtTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCgcggg > 2:1612387/1‑150 (MQ=255) gtggtTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCgcggg > 2:2138957/1‑150 (MQ=255) cTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCt > 1:594704/1‑150 (MQ=255) tgttgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTc > 2:998058/1‑150 (MQ=255) tgttgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTc > 1:1665311/1‑150 (MQ=255) tgttgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTc > 1:1561416/1‑150 (MQ=255) gttgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCg < 1:1467059/150‑1 (MQ=255) gttgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCCCGCGCGGCGCTCg < 2:153015/150‑1 (MQ=255) tgtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGt < 1:1521736/150‑1 (MQ=255) gtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCg > 1:325484/1‑147 (MQ=255) gtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCg < 2:325484/147‑1 (MQ=255) gtAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTCATA‑TGTTTCCGCCACAACCCTTGCAGC‑‑GCCTGTGATATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGtc < 1:1684175/150‑1 (MQ=255) gtAGGGGGAGGGGGCTGGTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCGGCTGGCGTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGtc < 1:24302/150‑1 (MQ=37) gggggagggggCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGCAACCGAGCGCCGCGCTGGCGGCGCTCGGTCTCa < 1:998058/150‑1 (MQ=255) gagggggCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAgg > 1:2307851/1‑150 (MQ=255) gggggCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGgcg < 1:1190464/150‑1 (MQ=255) ggCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGaaa < 2:1408166/110‑1 (MQ=255) ggCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGaaa > 1:1408166/1‑110 (MQ=255) tGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGaaa < 2:2307851/150‑1 (MQ=255) gTTTTGAGAGGCTGTTGGCGGTGAGA‑TGTGTCCGCCAC‑ACCCTTCGAGCGGGCCGGCATGTTC‑TTCGCGCCCGGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAAc < 1:274805/150‑1 (MQ=19) ttttGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACt > 1:128258/1‑150 (MQ=255) agagGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGt < 1:925018/150‑1 (MQ=255) agagGGGGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGGGCCGCCGGCGGCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGGCTCATAGGCGCTGAAACTGTCGt > 2:786368/1‑150 (MQ=37) gagGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTg < 2:594704/150‑1 (MQ=255) gagGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCCCGCGCGGCGCTct < 2:1603848/124‑2 (MQ=255) gagGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCCCGCGCGGCGCTCg > 1:1603848/1‑124 (MQ=255) agGGTGTTGGCGGTGAGA‑TGTGTCCGCCACATCCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTgg < 1:598522/150‑1 (MQ=255) agGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTgg > 2:2028613/1‑150 (MQ=255) gggTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGc < 1:2138957/150‑1 (MQ=255) ggTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCg > 1:1135424/1‑150 (MQ=255) ggTGAGA‑TGTGTCCGCCACAACACTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTgg > 2:2066410/1‑150 (MQ=255) gTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGc < 1:2028613/150‑1 (MQ=255) gtgtCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGt > 1:1601312/1‑106 (MQ=255) gtgtCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGt < 2:1601312/106‑1 (MQ=255) tgtCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTTAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGa > 2:1514558/1‑150 (MQ=255) tgtCCGCCACAACACTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGa > 1:2199603/1‑150 (MQ=255) tCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATa < 1:1820148/150‑1 (MQ=255) tCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATa > 1:1727254/1‑150 (MQ=255) cccTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTc < 2:1135424/150‑1 (MQ=255) cccTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTc > 1:1035665/1‑150 (MQ=255) ccTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcc > 2:2164725/1‑150 (MQ=255) ccTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcc > 1:618206/1‑150 (MQ=255) ccTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcc < 1:1612387/150‑1 (MQ=255) ttGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTgg > 1:118001/1‑115 (MQ=255) ttGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTgg < 2:118001/115‑1 (MQ=255) ttGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcccc < 2:371079/150‑1 (MQ=255) ttGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcccc < 1:729704/150‑1 (MQ=255) ttGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTcccc > 1:2331242/1‑150 (MQ=255) ccTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGGGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATAttt < 2:1727254/150‑1 (MQ=255) tgAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACt > 1:1431839/1‑150 (MQ=255) gaTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTc < 1:1078989/150‑1 (MQ=255) gaTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTc < 1:370491/150‑1 (MQ=255) gaTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGATCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTc > 2:356195/1‑150 (MQ=255) aTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCtt > 2:882939/1‑128 (MQ=255) aTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCtt < 1:882939/128‑1 (MQ=255) aTCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCt > 2:1936359/1‑150 (MQ=255) gcgcCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGaaa < 1:1523421/150‑1 (MQ=255) cgcccgcGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGgcg < 1:1611726/75‑1 (MQ=255) cgcccgcGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGgcg > 2:1611726/1‑75 (MQ=255) gcccgcGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTaaa < 1:2066410/150‑1 (MQ=255) cgTCCGGCTTGAGACATTCACCGCCTATGAAACCTAGCGCCGCGTGGGCGGCGCTCGGTGTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGAGACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTg < 2:706442/150‑1 (MQ=255) gTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAACCGCGATACGGTCTTTTCCCCTTATATTTCACTTTCGTGAAATTAAAGGTTGa < 2:1561416/150‑1 (MQ=255) tCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACCTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGAc > 2:1966612/1‑150 (MQ=255) cGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGc < 2:128258/150‑1 (MQ=255) gCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGccc > 1:934986/1‑150 (MQ=255) cTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCct < 1:1378854/150‑1 (MQ=255) tGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCctct < 2:350992/150‑1 (MQ=255) tGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCctct > 1:350992/1‑150 (MQ=255) acagtttCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTTTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTaaa > 2:1437657/6‑134 (MQ=11) acagtttCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTTTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTaaa < 1:1437657/129‑1 (MQ=11) tCAGCGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTTTCATAGGCGGTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATccc > 2:807548/1‑150 (MQ=14) tCACCGCCTATGAAACCGAGCGCCGCGCAGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATccc > 1:709760/1‑150 (MQ=255) cagcGCCTATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTTTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATcccc < 1:391079/147‑1 (MQ=11) cACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACCTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATcccc < 1:1966612/150‑1 (MQ=255) aCCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCt > 1:2025029/1‑150 (MQ=255) aCCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCt > 2:1609478/1‑150 (MQ=255) gCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTtat > 2:607135/1‑150 (MQ=255) tATGAGACCGAGCGCCGCCCGCGCGGCGCTCGGTTTCATAGGCGGTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTTATAAt < 1:807548/150‑1 (MQ=11) gAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTaaa < 1:1988424/117‑1 (MQ=255) gAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTaaa > 2:1988424/1‑117 (MQ=255) aaaCCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTTATAATgcgc < 1:1514558/150‑1 (MQ=255) aaaCCGAGCGCCGCGCAGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTTATAATgcgc < 2:709760/150‑1 (MQ=255) | TTGTTTTTGGGGTTTGGTGGTTGCTGTTGTAGGGGGAGGGGGCTGTTTTGAGAGGGTGTTGGCGGTGAGA‑TGTGTCCGCCACAACCCTTGCAGC‑‑GCCTGTGAGATCGAGCGCCGCCCGCGTCCGGCTTGAGACATTCACCGCCTATGAAACCGAGCGCCGCGCGGGCGGCGCTCGGTCTCATAGGCGCTGAAACTGTCGTGGCGAACACTTGGCAGCCTCGATACGGTCTTTTCCCCTTATATTTCACTTTCTTGAAATTAAAGGTTGACGCCCTCTCGAATCCCCTTATAATGCGC > NC_002947/524191‑524487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |