| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_LN832404 | 4,022,771 | T→G | 23.7% | Y437* (TAT→TAG) | ubiD → | 4‑hydroxy‑3‑polyprenylbenzoate decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_LN832404 | 4,022,771 | 0 | T | G | 23.7% | 114.2 / 41.8 | 63 | Y437* (TAT→TAG) | ubiD | 4‑hydroxy‑3‑polyprenylbenzoate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (29/19); new base G (9/6); total (38/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01 | |||||||||||
CCGATTCTGCAAAAACAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGATACCGTATATCGTGTCCG > NZ_LN832404/4022484‑4023064 | ccGATCCTTCCAAACCAGTTCCCGGAAATTGTCGATTTTGACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGAtt < 1:291922/295‑1 (MQ=255) ttCTGCAAAAACAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGc < 1:112027/295‑1 (MQ=255) aaCAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGCACGATGTGCTTTGGGCGATTACCAACCGTATGGACCCGGCGCGGGGTCATGTTCTGGTAGAAAATCCGCCTATTGATTAGCTGGATTTTGGCGTGCCTGt > 2:76424/1‑295 (MQ=255) aCAGTTCCCGGAAATTGTCGATTTTGACCGGCCGCGGGAAGGCTGCTCTTATGGCCTGGCGGTAGGGACAATCAAAAAACAGGACGCCGGACACGGTAAGCTCGGCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTGGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGtc < 2:714021/295‑1 (MQ=255) cAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCAGGCCACGCGCAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTAAACTAAATTTGTGATCGTTTGCGATGAAGACGTTAACGCACGCGAATGGAAACATGTTATTTGGGCTGTTACCAACCGTTCGTACCACGCGCGGCATACCGTACGGCATGCAACTACCGCTATTGCTTCACTGGTTTTCGCCCCCCCTGttt > 2:688817/1‑293 (MQ=255) gggAAATTGGCGATTTTTACCTGCCGCCGGAAGGCTGCTTTTATCGCCTGGCGGTAGTGACAATAAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCt < 2:366746/294‑1 (MQ=255) ggAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGCTTTTGCCTCGCCTGTCTCCGGGCTg > 1:45704/1‑295 (MQ=255) gAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGACCGAAGTGATTTGGGCGATTACCACCCGTATGGACCCCGCCCGGGATTCTTGTCGGGTAGAAAATTCGCCTATTGATTAGCGGGATTTTTCCTCGCCCTTCCCCGTGCTgg > 2:649199/1‑295 (MQ=255) aaTTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTACCGCACGCTACTGGAACGATGTGAGTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATGCTGGTCTGGTAGCAAATACGCGTTGTTGTTACCCGGCTTTTGCCTCGCCTGTCTCCGGGCTGGGt > 2:227858/1‑295 (MQ=255) cGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTAaaaa > 1:189482/1‑295 (MQ=255) tACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGc > 1:600203/1‑295 (MQ=255) gcctccGGAAGGCTTCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGAt < 1:250620/295‑1 (MQ=255) ggAAGGCTGCTCTTATCGCTTGGCGGTAGTGAAAATCAAAAAACATGACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACg < 2:646873/295‑1 (MQ=255) ggAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGCTCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGCCCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGCTTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAACACTTGGGCTGGCTGCCACg > 1:658843/1‑295 (MQ=255) tATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGACCGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGCTTTTGCCTCGCCTGTCTCCGGGCTGGGTTCACACATGGGGCGGGCTGCCACGAACAACTGGCAgg > 2:765545/1‑295 (MQ=255) tGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAGGCGCGTCATGATGGGCGGCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAAc < 1:554894/295‑1 (MQ=255) tGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAAc > 1:436387/1‑295 (MQ=255) tGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATACGGATTTTGCCTCGCCAGTCTCCGGGCTGGGTTCAAAAATGGGGATGGAAGCCACGAATAAATGGCCGGGGGAAAc > 1:756474/1‑295 (MQ=255) ggCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAccc > 1:618208/1‑295 (MQ=255) gCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAACAATGGGGCTGGATGCCACGACTAAATTGCCGGGGGAAAccc > 1:338415/1‑295 (MQ=255) ggTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGTATGCCACGAATAAATGGCCGGGGGAAACCAAg > 1:14760/1‑295 (MQ=255) tAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCg < 2:305710/295‑1 (MQ=255) aCAATCAAAAAACAGTAAGCCGGACACGCGAAGGGGGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTGTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAAt < 2:527371/295‑1 (MQ=255) aaaaaaCAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAACTGGGGATGGATGCCACGAATCAATGGCGGGGGGAAACCACGCGTGAATGGGGAc > 2:252119/1‑295 (MQ=255) aCGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGGAACCCAGGCTGGAGGGGGACGTCCcaacaa > 2:50698/1‑295 (MQ=255) gCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTATGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATTCCAACATTAAATTGCCGGGGGAAACCCAACGGTAATCGGGACGTTCCACCaaaa > 2:331354/1‑295 (MQ=255) gACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTAAGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAACAATGGGGCTGGTTGCCCCTAATAAATGGCCGGGGGAAACCCAGGGTGAATGGGGACGTCCCATCACAAgaga > 2:702817/1‑295 (MQ=255) cATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCACAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGCATGGGGCAGTCCCATCAACAACGATCCAGCTGGTGTcgag > 2:332791/1‑293 (MQ=255) tgGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCatat > 1:538357/1‑295 (MQ=255) gTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAACTGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCCGATGTTGTCGCGCATATTGACg > 1:291874/1‑295 (MQ=255) ggtcggtcTTACGCAAGTTTATGTATCCTAAATTTGTGTTCGATTGTGATGATGCCGTTAACGAACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCAt < 2:705562/295‑1 (MQ=255) ggTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCAt > 1:653032/1‑295 (MQ=255) cggtCTTCCGCCAGTTTATGTATCCTAAATTGGTGATCGTTTGCGATGATGACGTTACAGGACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTg < 2:538357/292‑1 (MQ=255) gTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTgg > 1:395300/1‑295 (MQ=255) cTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGAt > 1:685499/1‑295 (MQ=255) acacTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGAGGAACTGGCTATTTTTaa > 1:39012/1‑295 (MQ=255) aaaTTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACg < 1:693100/295‑1 (MQ=255) aagttGTGATGGTTTGGCGTAAGGACGTTAACGAAACGGTCTGGAACGATGTGATTTGGGCGATGACCACCCGGATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACgg < 2:436387/292‑1 (MQ=255) ttGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTaa < 1:50698/295‑1 (MQ=255) tttgATCGTTTGCGATGATGACGTTAACGCACTCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTaaa < 1:656458/293‑1 (MQ=255) gATCGTTTGCGAGGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAgc < 1:332791/295‑1 (MQ=255) gatgatGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATAAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAAATGGCCATTTTTCAAAACGGTAAAAGCGCCTGATggt > 2:52431/1‑293 (MQ=255) atgatgACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCCAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATgcgc > 1:150842/1‑295 (MQ=255) tgatgaCGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGcgcg > 1:354006/1‑295 (MQ=255) tagtgccgtgtcgcacgcGACTTGAGGTATGTGAGTTGGGCGTGTAGCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCgt < 2:212181/284‑1 (MQ=255) cGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGAAGCCATCTGGGATGAACGGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCgttgttt > 2:299548/1‑291 (MQ=255) cTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAACGATCCAGATGTTGTCGCGAATATTGACGCCATCTGGGATGAACTGGCTCTTTTTAAAAACGGTAAAAGCGCCTGCTGCGCGTTTG‑TTTTTCCCTATTTATCg > 2:748430/1‑295 (MQ=255) ggAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGAt < 1:252119/295‑1 (MQ=255) gtgagATGTGATTTTGGCGATTACCACCCGTATGGACCCGGGGCGGGATACTGTTCGGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCGGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATc < 2:618208/291‑1 (MQ=255) ctgtggtgATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCg < 1:270288/290‑1 (MQ=255) aCGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCg < 1:280018/295‑1 (MQ=255) gATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCCTATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCGTATGC‑CGTGTGTTTTTGCCCTATTTAACGATCCgcc > 2:387289/1‑293 (MQ=255) gATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGACACCCAGCGTGAATGGGGACGTACCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCCATTTTTAACAACGGTACAAGGCGCTGACGCGGGTTTG‑GTTTGCACTTTTTAGCGATCCGAc > 2:101650/1‑295 (MQ=255) aTGTGATTTGGGCGATTACCACCCGTAGGGACCCGGCGCGGGTTACTGTTCTGGTAGAAAATACGCCTATGGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATTGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACa < 1:613564/295‑1 (MQ=255) tgATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACagag > 1:279028/1‑295 (MQ=255) ggCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAgcgc < 1:52500/295‑1 (MQ=255) aTTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGa > 1:61607/1‑295 (MQ=255) aTGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCt < 1:150384/295‑1 (MQ=255) aCCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTaa > 1:292441/1‑295 (MQ=255) ggTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCTAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATc > 1:772215/1‑295 (MQ=255) gAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTaacaaggca > 2:55360/1‑188 (MQ=255) gAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTaacaaggca < 1:55360/192‑5 (MQ=255) aaaaTACGCCTATTGATTAGCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGa > 1:305803/1‑295 (MQ=255) tACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAACATGACATCGGTAGAAGCTATCACGGATagc > 2:304693/1‑293 (MQ=255) tACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGATAcc > 1:527194/1‑295 (MQ=255) ccTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACCACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGCTACCGtat > 1:73097/1‑295 (MQ=255) aTCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGACCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGCAACCGTATATCGTGTCCg > 1:627097/1‑295 (MQ=255) | CCGATTCTGCAAAAACAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGATGCGCGTTTG‑TTTTGCCCTATTTATCGATCCGACAGAGAAAGCGCATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGATACCGTATATCGTGTCCG > NZ_LN832404/4022484‑4023064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |