New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_LN832404	= 1655111	NA (NA)	14 (0.190)	14/376	NT	100%	pseudogene (616/696 nt)	EK12AG100_RS08315	IS3‑like element IS2 family transposase
	?	NZ_LN832404	1870686 =	0 (0.000)					intergenic (‑560/‑64)	EK12AG100_RS09380/EK12AG100_RS09385	scaffolding protein MipA/protein kinase YeaG

TTTTGAAGGTGTATCACCGGGCACGTTGTTCTCATCGTCGATAAAATGGCATGAGAGTTGCTGTGTTTTAGCAAGAGACGTCGTTCAGTTTACCTCTTCCGGGAGCCTCTACTATTCATATGAACGGCTCTTAACCTGTGCTAAAAAACGAAAGGACGGCATACCATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGA  >  NZ_LN832404/1870397‑1870973                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                 gtggaacgccgcttcggcaacgatcttccgtcgtctccattggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgct                                                                                                                                                                                                                                                                                                  <  1:773610‑M2/1‑1 (MQ=255) gtggaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgaagaggcgttcgagcattataacgaatggcatcagcatagtgcgct                                                                                                                                                                                                                                                                                                  >  1:989153‑M2/290‑290 (MQ=255)  tggaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTg                                                                                                                                                                                                                                                                                                 >  1:456206‑M2/289‑290 (MQ=255)   ggaacgcggcttcggcaacgagcctccggcgtctccagtggagtggctgacggataatggtgcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggggcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTgg                                                                                                                                                                                                                                                                                                <  2:292504‑M2/3‑1 (MQ=255)   ggaacgcctgttcggcaacgatcttccgtcgtatccagtggggtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTgg                                                                                                                                                                                                                                                                                                <  2:245196‑M2/3‑1 (MQ=255)   ggaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagaagggttaacggcagcaaagaaacttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTgg                                                                                                                                                                                                                                                                                                >  1:451776‑M2/288‑290 (MQ=255)    gaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTggg                                                                                                                                                                                                                                                                                               >  1:950053‑M2/287‑290 (MQ=255)    gaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTggg                                                                                                                                                                                                                                                                                               >  1:811178‑M2/287‑290 (MQ=255)     aacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccataccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGt                                                                                                                                                                                                                                                                                              >  1:334386‑M2/286‑290 (MQ=255)      acgccgcttcgggaatgattttccgtcggttccagtggagtggctgacgggtaatggttcatgctaccgggctaaggaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGtt                                                                                                                                                                                                                                                                                             <  2:821256‑M2/6‑1 (MQ=255)      acgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaccggaatagcagagaacttcgtgcaaacgacaaagcgggactaccacagtatcctgccacacccagccgggttaacggcagcaacgaaccttcccgatgctgtcgggcattataacgaatggcatccagcgtgtgcgctggggt                                                                                                                                                                                                                                                                                             >  2:78378‑M2/285‑288 (MQ=255)      acgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGtt                                                                                                                                                                                                                                                                                             <  1:209582‑M2/6‑1 (MQ=255)      acgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGtt                                                                                                                                                                                                                                                                                             <  1:817805‑M2/6‑1 (MQ=255)       cgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTa                                                                                                                                                                                                                                                                                            <  1:1017602‑M2/7‑1 (MQ=255)       cgccgcttcggcaacgatcttccgtcgtcgccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTa                                                                                                                                                                                                                                                                                            <  1:910275‑M2/7‑1 (MQ=255)        gccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcctccgcatagtgcgcTGGGTTAt                                                                                                                                                                                                                                                                                           >  1:613653‑M2/283‑290 (MQ=255)        gccgctgcggaaacgatcgtccgtcgtctccagtggagtagctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagttacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcGGGGTTAt                                                                                                                                                                                                                                                                                           <  1:612396‑M2/8‑1 (MQ=255)         ccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtc                                                                                                                                                                                                                                                                                          <  1:430564‑M2/9‑1 (MQ=255)         ccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtc                                                                                                                                                                                                                                                                                          <  1:848169‑M2/9‑1 (MQ=255)          cgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgagcTGGGGTAtcg                                                                                                                                                                                                                                                                                         >  1:756838‑M2/281‑290 (MQ=255)           gcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaccggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagcaccttgcagaagcgttcgagcattcacacgaatggcatccgcatagtacgcTGGGTCatcgg                                                                                                                                                                                                                                                                                        >  2:958086‑M2/280‑289 (MQ=255)           gcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtcgc                                                                                                                                                                                                                                                                                        <  1:713452‑M2/11‑1 (MQ=255)           gcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtcgc                                                                                                                                                                                                                                                                                        >  1:225037‑M2/280‑290 (MQ=255)           gcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtcgc                                                                                                                                                                                                                                                                                        >  1:1015035‑M2/280‑290 (MQ=255)           gcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtcgc                                                                                                                                                                                                                                                                                        >  1:782077‑M2/280‑290 (MQ=255)            gctcgggcacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTAtcgct                                                                                                                                                                                                                                                                                       <  2:248345‑M2/12‑1 (MQ=255)            cttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgatcaagcgtgactacatccgtatcatgccaaacccaaacgggttaacggcagcaaagaaccttgcagaggggttcgagcatactaacgaagggactccgcatagtgagctgggtgaccctg                                                                                                                                                                                                                                                                                       >  2:85145‑M2/279‑283 (MQ=255)            cttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcaaagtgcgcTGGGTTaacgcc                                                                                                                                                                                                                                                                                       >  2:385843‑M2/279‑289 (MQ=255)                  caacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcacaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagggcgctgggttatgcagccatca                                                                                                                                                                                                                                                                                 >  1:663833‑M2/273‑280 (MQ=255)                     cgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagacccttgcaaaggcgttcgagccttctaacgaatggcatccgaattgttccctgggttatccgcggccccggg                                                                                                                                                                                                                                                                              >  2:597628‑M2/270‑278 (MQ=255)                                                                                                  cccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaacagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggaatccgcatagtgcgcTGGGTTATCGCTCGACAAGGGAACATATGCGGCAGCGGGCTTGTACTTGGTGCAGTGGTAACAACCGTCTGAgaa‑tatcagggcaacttcacttacct                                                                                                                                                                                                >  2:88191‑M2/193‑278 (MQ=255)                                                                                                                   gaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTGGTAATGGGTTAAGTGCTACCAGCTGTATGGAAC‑TATGGGGGCCAGTCAACAAGCTGCCACGCACGGAGagtgc                                                                                                                                                                               >  2:242191‑M2/176‑288 (MQ=255)                                                                                                                                       gcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCAAAGGACGAAGGGTTCACACTGCAGGCGGTTCTTAc                                                                                                                                                           >  2:741735‑M2/156‑290 (MQ=255)                                                                                                                                                          ggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGc                                                                                                                                        >  2:1020661‑M2/137‑290 (MQ=255)                                                                                                                                                             atagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaacattgcagaggcgttcgagaattataacgaatggcatccgcctagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTACGTGATAACAGCTGTCTGGAAACTATAGGGGCAAATCCAGAAGCGACAAAGGACGAAGATGTCAAACTGCAGGAGttttctcacacttgtagtcataaccgcat                                                                                                                                      >  2:877156‑M2/134‑276 (MQ=255)                                                                                                                                                               agcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGc                                                                                                                                   <  1:741735‑M2/159‑1 (MQ=255)                                                                                                                                                                     gagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGc                                                                                                                             >  1:994646‑M2/126‑290 (MQ=255)                                                                                                                                                                                  acgataaagcgtgactacatcagtatcatgcccaaacccgacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattatcacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCAAGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCAAAGGACGAAGAGTTCACACTGCAGGAGTTTATTACCACTTGTCGACACGATCGAAGTGCTTATGACAACGAGGCTCAg                                                                                                                >  1:920347‑M2/113‑290 (MQ=255)                                                                                                                                                                                         agcgtgactacatcagtatcatgcccaaaccagacgggttaacggcaggaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTAt                                                                                                         <  2:183986‑M2/185‑1 (MQ=255)                                                                                                                                                                                                gtacatcattatcatgacagtaccagacgggtgaacggcatcaaagaacctttcagaggcggtcgagcagtagaacgaatggcagccgcatagtgcgcGTGGGTATCGCTCGCGACGGGAATAGCTGCGGCAGCGGGTGTGGAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGc                                                                                                  <  2:744446‑M2/192‑1 (MQ=255)                                                                                                                                                                                                                           cgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGCTAc                                                                       >  1:239624‑M2/72‑290 (MQ=255)                                                                                                                                                                                                                                                             gtcgagcatgaagacgaatggctgctgcatattgggcTAGGGTATGGCTGGCCACGGGAATATCGGCGGCAGCGGGCGTGTAATGGGTTAAGTGATAAAGTATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCt                                     <  2:578622‑M2/253‑1 (MQ=255)                                                                                                                                                                                                                                                                       ataacgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGATGAGCCTGTAATGGTCGATACAGCCCAGGAACCCAGACTTTCTCCACTCTTTTCTAACCGGGtcc                           >  2:339241‑M2/28‑289 (MQ=255)                                                                                                                                                                                                                                                                          acgaatggcatccgcatagtgcgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTg                        >  1:787139‑M2/25‑290 (MQ=255)                                                                                                                                                                                                                                                                                    tccgcatagtgtgcTGGGTGATCCCTCGCCACGGGAATATCTGCGGCAGCTGGCTTGTAATGGGTTAATGGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACGGCAGGAGTTTCGTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATcc              <  2:352558‑M2/276‑1 (MQ=255)                                                                                                                                                                                                                                                                                                gcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCACGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCCTGGTCGATACAGCCCAGGAACCCAGACTTTCACGACTCTTTTCTCAACGGGTCATTGCACGTTATCCGGAGTTTGaagg  >  2:1007404‑M2/3‑289 (MQ=255)                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                 TTTTGAAGGTGTATCACCGGGCACGTTGTTCTCATCGTCGATAAAATGGCATGAGAGTTGCTGTGTTTTAGCAAGAGACGTCGTTCAGTTTACCTCTTCCGGGAGCCTCTACTATTCATATGAACGGCTCTTAACCTGTGCTAAAAAACGAAAGGACGGCATACCATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAA‑TATAGGGGCAAATCCAGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGA  >  NZ_LN832404/1870397‑1870973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.