| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | NZ_LN832404 | 576,087 | G→A | 85.5% | intergenic (‑252/+38) | bor ← / ← EK12AG100_RS02865 | serum resistance lipoprotein Bor/DUF1398 domain‑containing protein | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_LN832404 | 576,087 | 0 | G | A | 85.5% | 282.6 / 34.2 | 110 | intergenic (‑252/+38) | bor/EK12AG100_RS02865 | serum resistance lipoprotein Bor/DUF1398 domain‑containing protein | 
| Reads supporting (aligned to +/- strand): ref base G (7/9); new base A (47/47); total (54/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.16e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
AGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAAC  >  NZ_LN832404/575801‑576374                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                aGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACAcc                                                                                                                                                                                                                                                                                                >  1:466544/1‑290 (MQ=255)         gcAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑Tg                                                                                                                                                                                                                                                                                      >  1:957585/1‑290 (MQ=255)            gTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGacac                                                                                                                                                                                                                                                                                  <  2:608400/290‑1 (MQ=255)            gTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGAGATGAATCGTCATTGTATTCACGGATTAACTATGTCCACAGCCCTGAAGGGGAACTTCTCTGCGGGCGTGTACGGGAATCA‑TTAA‑AAACGAGTAACACAGGGATTAGCGCGTGGATGTTTTGTATTATACTAACACACAGGTGC‑AGacc                                                                                                                                                                                                                                                                                   >  2:195475/1‑289 (MQ=255)                     aGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGACTAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTTCACTTATTGCATTTTGCCAACGCCCCGGTGC‑TGAACCGgaagaacc                                                                                                                                                                                                                                                                         >  2:123013/1‑288 (MQ=255)                      gCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCAAGGTGCGATGAATCGTCATTGTATTCACGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGAACACAGACATTAGCACGTGCATGTCTTGTATTATGCATACACCCCGGTGC‑GGCCACGcacgaacg                                                                                                                                                                                                                                                                         >  2:614891/1‑288 (MQ=255)                             tttCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGtt                                                                                                                                                                                                                                                                 <  1:824766/290‑1 (MQ=255)                             tttCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATAGTCATAGTATTCACGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCAGGGAATAA‑TTAA‑AAACGATGCACAAAGGGTTTAGAGCGTACATGAATGGTATTAGGCCAAACACACGGTGC‑TGACACGGAAGACACGGGaaga                                                                                                                                                                                                                                                                  >  2:674645/1‑287 (MQ=255)                               gtaTGGTGTTATTCCCGATGCTGTTTTAAGTTCGCAGAATCGGATGTGTAGAAAATTAAACAAACCCTAAACAAGGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCATACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTa                                                                                                                                                                                                                                                                <  2:81013/288‑1 (MQ=255)                                cATGGTGTTATGCCCGATGCTTGTTGAAGTTCGCAGAAGCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATg                                                                                                                                                                                                                                                              <  1:737825/290‑1 (MQ=255)                                  tGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGCTTAATTATGTCCACAGCCCTGACGGGGACCTTCTCTGCGGGAGTGTCCGGGCATAC‑TTAA‑AAACGATGCACCCAGGGTTTAGCGCGTACATGAATTGTATTATGACAACCCCCAGTTCG‑TGACACTGAAGAACCCTGACGTTATGa                                                                                                                                                                                                                                                             >  2:206407/1‑290 (MQ=255)                                   ggTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGAt                                                                                                                                                                                                                                                            <  1:1019966/290‑1 (MQ=255)                                     tgtTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTa                                                                                                                                                                                                                                                         <  1:128016/290‑1 (MQ=255)                                     tgtTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGAttt                                                                                                                                                                                                                                                          >  1:219548/1‑290 (MQ=255)                                       ttATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGACCACGGGGTTTCGGGCGTACATGTATTTTCTTATGCCAAAACCCCGGTGCTTGAC‑CGGACGAATACGGACGTTagtgtataa                                                                                                                                                                                                                                                        >  2:560549/1‑282 (MQ=255)                                        tATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGCATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGc                                                                                                                                                                                                                                                       <  1:777270/290‑1 (MQ=255)                                             ccGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGa                                                                                                                                                                                                                                                  >  1:586042/1‑290 (MQ=255)                                              cGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGaa                                                                                                                                                                                                                                                 <  1:987784/290‑1 (MQ=255)                                                   cTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTCGCGCGTACATGTATTGTATTATGCCAACACCCCGGTAC‑TGACACGGAAGAAACCGGACCTTATGATTTAGCGGGGaaatgtt                                                                                                                                                                                                                                            >  2:882981/1‑286 (MQ=255)                                                          aaGGTCGCATAAACGTATGTGTAGAAAATTAAACAAAACCTAAACAATTAGTTGAAATTTCATATTGTTAATATTGATTAAGGTATGCCAGGTGCGATGAATCGTCATTGTATGCCCGGATTAACGATGTCCACAGCCCTGACGGGGAACTTTTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAg                                                                                                                                                                                                                                     <  2:681364/290‑1 (MQ=255)                                                                     aTCGTATGTGTAGAAAATGAAACAAACCCTAAACAAGGAGGTGAAATGTCATATTGTTAATATTTATGAATGTATGCCAGGTGCGAGGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATg                                                                                                                                                                                                                          <  2:478089/290‑1 (MQ=255)                                                                          aTGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACCTGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGCCGTTCTGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTTAATGCtctc                                                                                                                                                                                                                     >  2:407854/1‑290 (MQ=255)                                                                           tgggtAAAAAATTAAACAAACCCTAAACAATGAGTTTAAAGTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTAATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCa                                                                                                                                                                                                                    <  2:922913/287‑1 (MQ=255)                                                                             tgtAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATTTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGt                                                                                                                                                                                                                  <  1:654009/290‑1 (MQ=255)                                                                             tgtAGAAAATTAAACAAACCCTAAACAATGAGTGTAAATTTCTGATTGTTAATATTTATTAATGTCTGCCAGGTGCCATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTTCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGt                                                                                                                                                                                                                  <  2:869917/290‑1 (MQ=255)                                                                               tAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTaaa                                                                                                                                                                                                               <  1:1031187/290‑1 (MQ=255)                                                                                tgAAATTGAAACAAACCCTAACATAGGATTTTAAATTTCATATTGTTTATATTTAGTAATGTAGGCCAGTTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTTACGTGGAACTTCTCTGCGGGAGTGTCCGTGAATAA‑TTAA‑AAACGATGCACACAGTGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTaaa                                                                                                                                                                                                               <  2:87129/289‑1 (MQ=255)                                                                                            aaacCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGCATAA‑TT‑ACAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACCCGGACGAAACCGGCCGTTATGATTTAGCGTGGAAAGATTGGTGTAGTGTTATGAATGCTCTCAGTCAATAGTAAGGAAtt                                                                                                                                                                                                   >  2:469803/1‑290 (MQ=255)                                                                                             aacCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTAt                                                                                                                                                                                                 >  1:230273/1‑290 (MQ=255)                                                                                              acccgtaaCAAGTAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTAt                                                                                                                                                                                                 <  1:195649/284‑1 (MQ=255)                                                                                               cccTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATc                                                                                                                                                                                                >  1:170033/1‑290 (MQ=255)                                                                                                     aCAATTAGTTGAAATTTCATATTGTTAATATTTATGAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGTAACTTCTTTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGt                                                                                                                                                                                          <  1:630818/290‑1 (MQ=255)                                                                                                     aCAATGATTTTAAATTTCATATTTTTAATATTTATTAATTTATGCCATGTGCGATGAATCGTCATTGTATTCCCTGATTAACTTTGTCCACTGCCCTGTCTGGTAACTTCTCTGCTGTATTTTCCGTGAATAA‑TTAA‑AAACGATGCACACAGTTTTTAGCTCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACTGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTTTTCTGAATGCTCTCATTAAATAGTAATGAATTATCAAAgtt                                                                                                                                                                                          <  1:630813/290‑3 (MQ=255)                                                                                                     aCAATGATTTGAAATTTCATATGGTTAATATTTATTAATGTATGTAAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGTAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGta                                                                                                                                                                                         <  1:705466/290‑1 (MQ=255)                                                                                                       aaTGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGtat                                                                                                                                                                                        >  1:18330/1‑290 (MQ=255)                                                                                                        aTGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCAAACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCTCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGTAAGATTGTTGTCGTGTTCTGCATGCTCTAATTAATTAGTAATGAAATATTAAAGGTATAg                                                                                                                                                                                      >  2:537019/1‑290 (MQ=255)                                                                                                        aTGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGtata                                                                                                                                                                                       >  1:153780/1‑290 (MQ=255)                                                                                                         tGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGCAGCGGAAGAAACCGGACGGTATGATTTAGAGTGGAAAGATTTGTGTAGTGTTATTAATCTTCTCCTTAAATAGTATTGATTTATCAAAGGtgtac                                                                                                                                                                                      >  2:538817/1‑289 (MQ=255)                                                                                                          gAGTTGACATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGt                                                                                                                                                                                     >  1:599778/1‑290 (MQ=255)                                                                                                          gAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACCCGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGCTTTGTGTAGTGTTCTGAATGCTCTCAGTAATTAGTAATGAATTATCAACGGTATAGt                                                                                                                                                                                     >  1:352345/1‑290 (MQ=255)                                                                                                             tttacaTTTCATATTGTTAATATTTATTAAGGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCTGATTAACTATTTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TTACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAACTAGTAATGAATTATCAAAGGTATAGTAat                                                                                                                                                                                  <  1:786361/285‑1 (MQ=255)                                                                                                                                  atttattAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATAtt                                                                                                                                                            >  1:150479/1‑290 (MQ=255)                                                                                                                                  atttattAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGatat                                                                                                                                                             <  1:533376/290‑1 (MQ=255)                                                                                                                                      attaATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGt                                                                                                                                                         >  2:162290/1‑290 (MQ=255)                                                                                                                                            gtatgcCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGTTATAGTAATAACTTTTATGTTCGTGGATATTTGTAATCCa                                                                                                                                                   >  1:672130/1‑290 (MQ=255)                                                                                                                                                gtCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGCTTTGTGTAGTGTTCTGATTGCTCTCAGTAAATAGTACTGAATTATAAAAGGTATAGTAATATCTTTTATGTTCATGAATATTTGTAACCCATCGGa                                                                                                                                              >  1:173592/1‑290 (MQ=255)                                                                                                                                                gccAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCgg                                                                                                                                               >  2:1006128/3‑290 (MQ=255)                                                                                                                                                   aGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGaaa                                                                                                                                            >  1:997/1‑290 (MQ=255)                                                                                                                                                   aGGTGCGAGGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTTCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGaaa                                                                                                                                            <  1:580335/290‑1 (MQ=255)                                                                                                                                                     gTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCAAACAGGGTTTAGCGCGTCCATGTATTGTATTATGCCAACACCCCGGTGC‑TGACTAGGCAGCAACCGGACGTTCAGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTTATTGCTCTCAGTCAATAGTACTGAATTATCACAGGAATAGTAATCTCTTTGTTGTACGTGGCTATTTTTAATCAATCgtaccaa                                                                                                                                          >  2:972316/1‑284 (MQ=255)                                                                                                                                                         gATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGACTGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGTTATTTGTAATCCATCGGAAAACTCCt                                                                                                                                      >  1:481906/1‑290 (MQ=255)                                                                                                                                                           tGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAATGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAACGGTATAGTAATATTTTTTATGTTAGTGGATATTTGTAATCCATCGGAAAACTCCTgt                                                                                                                                    >  2:641250/1‑289 (MQ=255)                                                                                                                                                              aTCGTCATTGTATTCCCGGATTAACTATTGCCACAGCCCTGACGGGTAAAGTCTCTGCGGGAGTGGCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCTTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCttt                                                                                                                                 <  2:957585/290‑1 (MQ=37)                                                                                                                                                              aTCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACACCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGAGGTGTTCTGAATGCTCGAAGTAAATAGTAATGAATTATAAAAGGTATATAAATATCTTTTATGTTCGGGGATATTTGTAATCAATCGTAAAGATCCTGAttt                                                                                                                                 >  2:568819/1‑290 (MQ=255)                                                                                                                                                                cGTCATGTTGTTCCCGGTTTAACTATGGCCAAAGCCCGGACGGGGAAATTGTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAg                                                                                                                               <  2:613331/290‑1 (MQ=25)                                                                                                                                                                    aTTTTATTCCCGGAGTAAACAGTGCAACAGACCTTACGGGGAACTTCTCTGCGGGAGTGTCCGGAAATAA‑TTAA‑AAACGATGCACACAAGGGTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAg                                                                                                                           <  2:714491/290‑1 (MQ=25)                                                                                                                                                                       gTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGTGAGGGGCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGGACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGAttt                                                                                                                       <  1:751275/290‑1 (MQ=255)                                                                                                                                                                        tATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGAttt                                                                                                                       >  1:155335/1‑290 (MQ=255)                                                                                                                                                                          ttCCCAGATTAAATATGTCCACAGACCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATTATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTc                                                                                                                     <  2:740593/290‑1 (MQ=37)                                                                                                                                                                            cccGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCTTGCTTTAGCAAGATTTTCCCt                                                                                                                  >  2:138419/1‑290 (MQ=255)                                                                                                                                                                              cGGGTTAACTATGGCCACAGCCCTGACGGTGAACTTCTCTGCGGGAGTGACCTGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGTCACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTg                                                                                                                 <  2:108930/290‑1 (MQ=25)                                                                                                                                                                                          gTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAAt                                                                                                     >  1:260209/1‑290 (MQ=255)                                                                                                                                                                                          gTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAAt                                                                                                     <  2:219548/290‑1 (MQ=255)                                                                                                                                                                                           gatctaGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAAtg                                                                                                    <  1:139468/285‑1 (MQ=255)                                                                                                                                                                                             cacaGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATAttcaaat                                                                                                                                                       >  2:167969/1‑232 (MQ=255)                                                                                                                                                                                             cacaGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAAtgtg                                                                                                  >  1:356609/1‑290 (MQ=255)                                                                                                                                                                                              accgCCCTGACTGGGAACTTCTGTGCGGGAGGTGCCGTGAATAAGTA‑A‑AAACGATGCAAACATGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTTGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGa                                                                                                 <  2:136287/287‑1 (MQ=25)                                                                                                                                                                                                aGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTATTATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTACCTGTATTGCTTAAAttaattc                                                                                               >  2:139468/1‑284 (MQ=37)                                                                                                                                                                                                  cccTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGGTTTGTGTAGTGTTCGGAATGCACTCAGTAAATCGTAATGAATTATCAAAGGTATAGTAATAACTTTTATGTTCGTGTATATTTGTAATCAATCGGCACACTCATGCTTTAGAAAGATTTTACCTGTATTGCTCAATTGTGACTtc                                                                                             >  2:367976/1‑290 (MQ=255)                                                                                                                                                                                                        cGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGa                                                                                       >  1:743603/1‑290 (MQ=255)                                                                                                                                                                                                           ggAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTCGCAAGATTTTCACTGTATTGCTGAAATGTGATTTCTCTTGAttt                                                                                    >  1:838569/1‑290 (MQ=255)                                                                                                                                                                                                                 tctcTGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTGATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCt                                                                              <  1:710016/290‑1 (MQ=255)                                                                                                                                                                                                                   tctGCGGGAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTAt                                                                            >  1:99779/1‑290 (MQ=255)                                                                                                                                                                                                                    ctGCGGGAGGGTACGGGAATAA‑TTAA‑AAACGAGGCACACAGGGTTTAGCGAGTACATGTATTGTATTATGCCAACACACCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATc                                                                           <  1:17966/290‑1 (MQ=25)                                                                                                                                                                                                                      gCGGGATGGTCCTTGAATAA‑TTAA‑AAACGATTCAAACAGGGTTTAGTGCGTACATTTATTGTATGATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCAt                                                                         <  2:654239/290‑1 (MQ=21)                                                                                                                                                                                                                        gggAGTGTCCGGGAATAA‑TTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTCTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAg                                                                       >  1:792551/1‑290 (MQ=255)                                                                                                                                                                                                                                       taa‑tTAA‑AAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGa                                                        >  2:442068/1‑290 (MQ=255)                                                                                                                                                                                                                                              a‑aaaCGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCgta                                                  >  2:215931/1‑289 (MQ=255)                                                                                                                                                                                                                                                 aaCGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTAtt                                                >  1:130776/1‑290 (MQ=255)                                                                                                                                                                                                                                                     aTGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCtt                                            >  1:256298/1‑290 (MQ=255)                                                                                                                                                                                                                                                        cacacaGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTACATAGTAATGAATTATCAACGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAATTGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATACGATGCTTCTTTCTTgag                                         >  2:401540/1‑290 (MQ=255)                                                                                                                                                                                                                                                          cacaGTGTTTAGGACGTACATGTAGTGGATTATGCCAACACCCCGGTGC‑TGACAAGGAAGAAACCGGACGGTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATTTCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGaa                                       <  2:367745/290‑1 (MQ=21)                                                                                                                                                                                                                                                            caGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTCTGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCTTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACTTATCATAGGACGTTTCTATAAGTTGCGTATTTCTTGAGAAtt                                     >  2:17722/1‑290 (MQ=25)                                                                                                                                                                                                                                                            caGGGGTTAGCGCGTACATGTATTGGATTATGCCAACACCCCGGTGC‑TTACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCGTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAAtt                                     <  2:689509/290‑1 (MQ=255)                                                                                                                                                                                                                                                             aGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAAttt                                    <  1:217670/290‑1 (MQ=255)                                                                                                                                                                                                                                                                  ttAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAACGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACAt                               >  2:948971/1‑290 (MQ=255)                                                                                                                                                                                                                                                                  cgagcaagTACACATATTGCAGGATGGCAAGGCCCCGGTGC‑TGGTACGGGAGAAACCGGAGGTTATGATGTTGCGTTGAAAGAGTTGTGTAATGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATAGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACAt                               <  2:500159/283‑1 (MQ=21)                                                                                                                                                                                                                                                                   tatgtcgTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTTTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACAtt                              <  2:511422/285‑1 (MQ=255)                                                                                                                                                                                                                                                                   tAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACAtt                              <  2:1053591/290‑1 (MQ=255)                                                                                                                                                                                                                                                                        cgTACATGTATTGTATTATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACaa                         >  2:372976/1‑290 (MQ=255)                                                                                                                                                                                                                                                                             aggtattgtattATGCCAACACCCCGGTGC‑TGATACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCACTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCttt                    <  2:201756/288‑1 (MQ=255)                                                                                                                                                                                                                                                                                  ttgttttATGCCAACCCCCCGTTGC‑TAGCACTGAATAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTTGTAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGTATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAg               <  2:336094/285‑1 (MQ=21)                                                                                                                                                                                                                                                                                       ttATGCCAACGTCCCGGTGC‑TGACACGGAAGAAACCTGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCtt          <  1:806346/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                       ttATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCTGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCtt          <  1:852206/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                        tATGCCAATACCCCGGTGA‑TGACACGGAAGAAACCGGACGGTATGATTTAGCGTGGAAAGAATTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCttt         <  2:352539/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                        tATGCCAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCttt         <  1:634197/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                          ttccAACACCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTtta       <  1:561281/288‑1 (MQ=255)                                                                                                                                                                                                                                                                                            ccAACACCCCGGTGC‑TGACACGGAAGAAACCTGACGTTATTATTTAGCGTGGAAAGATTGGTGTAGTGTTCTGAATGCTCGCAGTAAATAGTAATGAATTATCAAAGGTATAGGAATAGCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTGAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTttatt     <  2:956855/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                             cAAAGCCCCGGGGG‑TGTAACGGAAGAAACCGGACGTTATTATTTAGCGTGGAAAGATTTGTGTAGTGGTCTGAATGCTTTCAGTAAATAGTAATGAATTATCAAAGGTATAGGAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTttatta    <  2:719926/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                               aCGCCCCGGTGC‑TGACACGGAAGAAGCCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAATGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAac  <  1:409830/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                AGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAA‑TT‑A‑AAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGC‑TGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTTTATTAAC  >  NZ_LN832404/575801‑576374 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |