Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NZ_LN832404 2,561,554 Δ90 bp 100% [EK12AG100_RS12790]EK12AG100_RS25715 [EK12AG100_RS12790], EK12AG100_RS25715

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_LN832404 2561554 2561643 90 71 [2] [0] 69 [EK12AG100_RS12790]–EK12AG100_RS25715 [EK12AG100_RS12790],EK12AG100_RS25715

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_LN832404 2561644 =0 (0.000)46 (0.690) 41/386 NT 100% intergenic (‑3/+13) EK12AG100_RS25715/eutA hypothetical protein/ethanolamine ammonia‑lyase reactivating factor EutA
?NZ_LN832404 = 2561553 0 (0.000)coding (3/1362 nt) EK12AG100_RS12790 ethanolamine ammonia‑lyase subunit alpha

TTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCG  >  NZ_LN832404/2561352‑2561936
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                    
ctcacgcagttcgctgatgctccagttttgaatctggttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATaa                                                                                                                                                                                                                                                                                                   >  1:330416‑M1/293‑296 (MQ=255)
 gcacgcagttcgctgatgctccagtgtttaatctgggtggaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatctgcataggcaatcaccggattagtgcggatgtccgctacggtcatttccgacaacacctgcttggccgccacgcgctccggtgagcttgccgcggcgacgcccgccagcacatcccccgaacgcagttcgttggctctagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAg                                                                                                                                                                                                                                                                                                  >  1:769921‑M1/292‑296 (MQ=255)
  cacgcagttcgctgatgctccagtttttaatctggttgtaggccggttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGt                                                                                                                                                                                                                                                                                                 >  1:118040‑M1/291‑296 (MQ=255)
        gttcgctgatgctccagtttttaatctggttgtaggccgtgtcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTcc                                                                                                                                                                                                                                                                                           >  1:615804‑M1/285‑296 (MQ=255)
         ttcgctgatgctccagtttttaatctggttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgccgcgacgcccgccagcacatcacccgaacgcagttcgttggctttagccagcaccccttttccctccttcaactgatgtactttgccgaaccatgtggtccttagtttaCTCAGTTGTTccc                                                                                                                                                                                                                                                                                          <  2:410283‑M1/13‑1 (MQ=255)
         gtcgctgatgctccggtttttaatctggttgtaggccgtttcgttaacctcgtcctgagtcagccgcgtcacgcagtcatcttcagaggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTccc                                                                                                                                                                                                                                                                                          >  2:531041‑M1/284‑296 (MQ=255)
            gctgatgctccagtttttaatctggttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttgaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCATCa                                                                                                                                                                                                                                                                                       <  1:505396‑M1/16‑1 (MQ=255)
                     cacgttttgcatctggtgttgggccgtttcgttagcatcgccctgaatcagccgcgtcacgcagtcagtttcataggcaatcaccggattattgcggatgtccgctacgggcatttccgacaacacctgcttggccgccacgcgcgcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGaaa                                                                                                                                                                                                                                                                              >  2:209977‑M1/272‑296 (MQ=255)
                           tttaatctggttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAg                                                                                                                                                                                                                                                                        <  1:71703‑M1/31‑1 (MQ=255)
                                   ggttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgccgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTtca                                                                                                                                                                                                                                                                <  1:551952‑M1/39‑1 (MQ=255)
                                    gttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTtcac                                                                                                                                                                                                                                                               <  1:666526‑M1/40‑1 (MQ=255)
                                    gttgtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTtcac                                                                                                                                                                                                                                                               >  1:404934‑M1/257‑296 (MQ=255)
                                       gtaggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTtcaccgt                                                                                                                                                                                                                                                            >  1:762186‑M1/254‑296 (MQ=255)
                                          ggccgtttcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTtcaccgtcac                                                                                                                                                                                                                                                         >  1:211099‑M1/251‑296 (MQ=255)
                                               gttctttaccctcgtcctgaatcggccgcgtcccgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcctttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGca                                                                                                                                                                                                                                                    >  2:509283‑M1/246‑296 (MQ=255)
                                                 tcgttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatccattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGcaca                                                                                                                                                                                                                                                  <  1:772015‑M1/53‑1 (MQ=255)
                                                    ttaacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc                                                                                                                                                                                                                                               <  1:209524‑M1/56‑1 (MQ=255)
                                                     taacatcgtcctgaatcagccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgatgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaacttggtctttagtttcATAAGTCGTTCCCTCAGGAAGGCAATGCGACTGCTTTCCCAGccaccggccacaccg                                                                                                                                                                                                                                              <  2:679386‑M1/57‑8 (MQ=255)
                                                                      agccgcgtcacgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGc                                                                                                                                                                                                                             >  1:216911‑M1/223‑296 (MQ=255)
                                                                                     tcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata                                                                                                                                                                                                              >  1:436136‑M1/208‑296 (MQ=255)
                                                                                     tcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgcagcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACACCCGAACCGCCAACaagaggcgtacccacttccata                                                                                                                                                                                                              <  2:352502‑M1/89‑11 (MQ=255)
                                                                                                     tcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgccgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatctccattgccgaccaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAACTGCGAGACATTTCCCCGTCCCCGGCACAAACGATCGGCCAAAAAGCGGAGTCCCAATGTCTATATAGTCCCCCGCGCGGa                                                                                                                                                                                              <  2:323879‑M1/105‑1 (MQ=255)
                                                                                                             ttattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGTCACAACCGATCTGCCAAAAAGAGGCGTACCACTGTCGCTATAGTCTCCCGCGCGCACAATCACt                                                                                                                                                                                      <  2:755040‑M1/113‑1 (MQ=255)
                                                                                                                ttgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGCTTTCACCGTCACCGGCACAACCGATCCGCCACAACGAGGCGTACCAATGTCGATATAGTCCCCcgcccggacacacactccg                                                                                                                                                                                   <  2:523974‑M1/116‑10 (MQ=255)
                                                                                                                ttgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGACATAGTCCCCCGCGCGGACAATCACTTCg                                                                                                                                                                                   <  1:805677‑M1/116‑1 (MQ=255)
                                                                                                                 tgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGACAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGt                                                                                                                                                                                  <  1:286477‑M1/117‑1 (MQ=255)
                                                                                                                    ggatgtccgctacggtcatttccgaccacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCaa                                                                                                                                                                               >  1:562891‑M1/177‑296 (MQ=255)
                                                                                                                     gatgtccgctacggtcatttccaacatcccctgcttggccgccactcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAAt                                                                                                                                                                              >  1:500380‑M1/176‑296 (MQ=255)
                                                                                                                                cggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGCCCAATCACTGCCTCCATGACTCCCAACg                                                                                                                                                                   <  2:598857‑M1/132‑1 (MQ=255)
                                                                                                                                  ggcgctccccacaacacccgcttgccgtccacgcgctccggtgggctggccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACggg                                                                                                                                                                 >  2:137140‑M1/163‑296 (MQ=255)
                                                                                                                                     atttccgacaacacccgctgtgcctccacgcgctcctgggagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAgt                                                                                                                                                              >  1:858415‑M1/160‑296 (MQ=255)
                                                                                                                                         ccgacaacacctgcttggccgccacgcgctcctgtgagcttgccgcggcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAgttgtt                                                                                                                                                          >  1:648577‑M1/156‑296 (MQ=255)
                                                                                                                                            acaacacctgctgtgccgccacgcgctcatgggtgcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTa                                                                                                                                                       >  1:518286‑M1/153‑296 (MQ=255)
                                                                                                                                                cacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCACCGGGAGTTGTTGTAGCtg                                                                                                                                                   <  1:619598‑M1/148‑1 (MQ=255)
                                                                                                                                                  cctgctttgccgcctcgcgctcctgtgagcttgccgctgcgacgcccgccagcacatccccctaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGGCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCtgtg                                                                                                                                                 >  1:59690‑M1/147‑296 (MQ=255)
                                                                                                                                                     gcgttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGgc                                                                                                                                              >  1:44469‑M1/144‑296 (MQ=255)
                                                                                                                                                                    gctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGCTTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTCTctgtgggcgcaacacaataccca                                                                                                                               <  2:576546‑M1/168‑10 (MQ=255)
                                                                                                                                                                                 tgccgctgcgacgcccgccagcacatcccccgaacgcagttcgtttgctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGACGGACAGGCGAGTGATTTCACCGTCACCGGCACAACCGATCAGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGCAAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGGGGGCGCAACCAGCTGCACAGACCTGTACcaac                                                                                                                  <  2:400945‑M1/181‑2 (MQ=255)
                                                                                                                                                                                  gccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCCACAAGAGGCGTACCAATGCCGCTATAGTCCCCCGCGCGGACCATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAg                                                                                                                 <  1:788110‑M1/182‑1 (MQ=255)
                                                                                                                                                                                    cgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGACGCGTACCAATGTCGCTATCGTCCCCCGCGCGGACACCCACTCCGTCCATGCCTCCCAACGGGACTGGTCGTAGCTGGCGGCGCACCAACACGCGCACAGCTttcccacactc                                                                                                               <  2:329719‑M1/184‑6 (MQ=255)
                                                                                                                                                                                      cggcaacgcccgccagcacatcccccgaacgcagttcgttggctttagccagaacctcttttacatccttaaactgatatacattgccgaacaatgtggtcgttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCt                                                                                                             >  2:57850‑M1/111‑296 (MQ=255)
                                                                                                                                                                                         cggcgcacgccagcacctcccacgtactcggttgtgcggcattaaccagcaccttttttacatccgtaggctgatatacattgccgaaccatgtggtctttagtttcACAAGTCGTTCACTCAGGAAGGAAATGCGAGTGATTTCGCCGTCCCCGGCACAACCGATGCGACAAAAAGGGGCGTACGAATGTCGATATAGTCGCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTgca                                                                                                          >  2:720205‑M1/108‑295 (MQ=255)
                                                                                                                                                                                                 gcaagcccagcccccgaactccgttcgtgggctttagccagaacctcttttacatcctagaactgacatacattgccgaacaatgtggtctttagttacATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGccacc                                                                                                  >  2:505396‑M1/100‑296 (MQ=255)
                                                                                                                                                                                                     gcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGccaccacca                                                                                              <  1:98651‑M1/201‑1 (MQ=255)
                                                                                                                                                                                                     gcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGAAATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGCGTTGTTGTAGCGGTGGGCCACACAACATGCCCAGAGCTTTACCACAGTCctgcccggctccaccca                                                                                              <  2:101616‑M1/201‑9 (MQ=255)
                                                                                                                                                                                                           cccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAggg                                                                                        <  1:705949‑M1/207‑1 (MQ=255)
                                                                                                                                                                                                                  acgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCACGGCCACCACCAGCAGGGGATGCgg                                                                                 <  1:589349‑M1/214‑1 (MQ=255)
                                                                                                                                                                                                                     cagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGAAGTTGTTGTAGCTGTGGGCGCAACCACATGCCCAGAGCTTTACCAACGTCCTTGCCGGCCCCCACCAGCAGGGCATGCggaat                                                                              <  2:477339‑M1/217‑3 (MQ=255)
                                                                                                                                                                                                                      agttcgtttgctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTc                                                                             >  1:76570‑M1/79‑296 (MQ=255)
                                                                                                                                                                                                                         tcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCACTGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGa                                                                          <  1:628567‑M1/221‑1 (MQ=255)
                                                                                                                                                                                                                                          cacctcttttaccaccgtaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTCCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATc                                                         >  1:185065‑M1/59‑296 (MQ=255)
                                                                                                                                                                                                                                          caccccttttacatccttaaactgagatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGGGTGATTTCACCGGCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATc                                                         >  1:533504‑M1/59‑296 (MQ=255)
                                                                                                                                                                                                                                           acctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGACATCg                                                        <  1:795158‑M1/239‑1 (MQ=255)
                                                                                                                                                                                                                                              tcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAACTCGAcc                                                     <  1:42712‑M1/242‑1 (MQ=255)
                                                                                                                                                                                                                                               cttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCa                                                    <  1:413536‑M1/243‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttacctccttaaactgatatacattgcggaaaaaggtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAAcg                                                 >  2:619598‑M1/51‑296 (MQ=255)
                                                                                                                                                                                                                                                      atccttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCACCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCACAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCCGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGAGtt                                             <  1:634270‑M1/250‑1 (MQ=255)
                                                                                                                                                                                                                                                          ttaaactgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTtgatg                                         <  1:767543‑M1/254‑1 (MQ=255)
                                                                                                                                                                                                                                                              actgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCCCAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGCGCTTTACCAAAGTCCTGCCACGCCACCACCAGCAGGGGACGCGGATTCGGCACACGCGCGACGAAAGCGACCCACACTTCGGTGACCg                                     <  2:156744‑M1/258‑1 (MQ=255)
                                                                                                                                                                                                                                                                tgatatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTc                                   <  1:265910‑M1/260‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tatacattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCACCAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAAAGCGTTAGTGACCGTCAGt                                <  2:104722‑M1/263‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tgacaatgccgaacactgtggcatttaggtgaATAGGCCGTTCCCTCGGGAAGGAAATGCGAGTGATTCCACCGGCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTa                               >  2:437744‑M1/33‑296 (MQ=255)
                                                                                                                                                                                                                                                                       cattgccgaacaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACcg                            <  2:93366‑M1/267‑1 (MQ=255)
                                                                                                                                                                                                                                                                        attgccgaacaatggggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATAGAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACcgc                           >  1:682998‑M1/29‑296 (MQ=255)
                                                                                                                                                                                                                                                                                acaatgtggtctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCAAGCGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCACGGGATGCGGATTCGGAAAACGCCCCCCGAAATAGACGACCGCGCGGAGGACCGTCAGTACCCCGGCgtacc                   <  2:692620‑M1/276‑3 (MQ=255)
                                                                                                                                                                                                                                                                                    tgtggtctttagtgtcATAAGTCGTTCCCGCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGcac               >  1:597165‑M1/17‑296 (MQ=255)
                                                                                                                                                                                                                                                                                         tctttagtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCa          <  1:298977‑M1/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                                               gtttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAAAGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAgg    <  1:632314‑M1/291‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                 ttcATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCg  <  1:164776‑M1/293‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                    
TTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCG  >  NZ_LN832404/2561352‑2561936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.