New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994981 (0.010)223 (1.350) 111/188 0.0 99.8% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 239 total aligned reads displayed.

CATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_000913/1299401‑1299596
                                                                                                 |                                                                                                  
catcatGTTCATTTCACCACATCATAATCCTGGGATTGCTGAAGAATAATTGAAATGATATTATTAATTCCCCTGCCTTTGGTAGAGGAAAGTGCTAAa                                                                                                   <  2:3019860‑M1/99‑2 (MQ=255)
catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAa                                                                                                   >  1:2336468‑M1/1‑98 (MQ=255)
   catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataa                                                                                                <  1:3822317‑M1/99‑5 (MQ=255)
   catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataa                                                                                                <  2:215181‑M1/99‑5 (MQ=255)
    atGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataat                                                                                               >  1:1750320‑M1/1‑94 (MQ=255)
     tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                              >  1:471289‑M1/1‑93 (MQ=255)
     tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                              <  1:4041725‑M1/99‑7 (MQ=255)
      gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                             >  1:1112822‑M1/1‑92 (MQ=255)
       ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                            <  2:2287981‑M1/99‑9 (MQ=255)
       ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                            <  1:2952349‑M1/99‑9 (MQ=255)
       ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                            >  2:3312843‑M1/1‑91 (MQ=255)
        tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                           >  1:3116936‑M1/1‑90 (MQ=255)
            ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatt                                                                                       <  2:4172741‑M1/99‑14 (MQ=255)
            ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatt                                                                                       <  1:1870820‑M1/99‑14 (MQ=255)
              tgcCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgt                                                                                     <  2:1554261‑M1/98‑16 (MQ=255)
                ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                   >  1:1577609‑M1/1‑82 (MQ=255)
                ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                   >  1:2374010‑M1/1‑82 (MQ=255)
                 cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaa                                                                                  >  2:1248669‑M1/1‑81 (MQ=255)
                  acaTCATAATCCTTGTCTTGCTGAAGAATAATTGATATCAGATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                 <  1:3684707‑M1/99‑20 (MQ=255)
                   catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaat                                                                                >  1:3441025‑M1/1‑79 (MQ=255)
                      catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTATAGGAAAGTGCTAAataataatcaattgttaaattat                                                                             >  2:1322112‑M1/1‑76 (MQ=255)
                      catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                             >  1:881895‑M1/1‑76 (MQ=255)
                       atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                            >  2:580984‑M1/1‑75 (MQ=255)
                       atAATCATGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTTCTCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                            <  1:1246938‑M1/99‑25 (MQ=255)
                         aaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                          <  1:2392965‑M1/99‑27 (MQ=255)
                           tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                        <  2:1810596‑M1/99‑29 (MQ=255)
                             cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcat                                                                      <  2:3070945‑M1/99‑31 (MQ=255)
                              tGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                     >  2:2226325‑M1/1‑68 (MQ=255)
                              tGGGCTAGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCGTTGGTAGATGAAAGTGCTAAataataatcaattgggaaattagtgtgcatt                                                                     >  2:2136441‑M1/1‑68 (MQ=255)
                                 gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                  <  2:2687256‑M1/99‑35 (MQ=255)
                                  cTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 >  2:2616569‑M1/1‑64 (MQ=255)
                                  cTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                 >  1:3175222‑M1/1‑64 (MQ=255)
                                     gttcaagaataatTGAAATGATATTATTCATTCCACTGCCTTTGGTAGAGGAACGTGATAAataataatcaattgttaaattattgtgcatttcactac                                                              <  2:3428110‑M1/95‑39 (MQ=255)
                                     gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactac                                                              >  1:1696692‑M1/1‑61 (MQ=255)
                                      cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                             <  1:2240080‑M1/99‑40 (MQ=255)
                                      cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                             >  1:773859‑M1/1‑60 (MQ=255)
                                       tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                            >  2:2013580‑M1/1‑59 (MQ=255)
                                       tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                            <  2:702699‑M1/99‑41 (MQ=255)
                                       tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                            >  1:1489754‑M1/1‑59 (MQ=255)
                                       tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                            >  2:3895731‑M1/1‑59 (MQ=255)
                                       tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                            >  1:3388128‑M1/1‑59 (MQ=255)
                                        gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                           <  1:785869‑M1/99‑42 (MQ=255)
                                        gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                           >  2:3938207‑M1/1‑58 (MQ=255)
                                        gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataagcaattgttaaattattgtgcatttcactactgg                                                           <  2:3025380‑M1/99‑42 (MQ=255)
                                        gaagaaTAATGGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatggttaaattattgtgcatttcactactgg                                                           >  2:3231141‑M1/1‑58 (MQ=255)
                                         aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                          >  1:2695709‑M1/1‑57 (MQ=255)
                                         aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                          <  1:4184559‑M1/99‑43 (MQ=255)
                                         aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgga                                                          >  1:2799208‑M1/1‑57 (MQ=255)
                                          agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaa                                                         <  1:1398862‑M1/99‑44 (MQ=255)
                                          agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaa                                                         >  1:2007892‑M1/1‑56 (MQ=255)
                                              taatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgt                                                     <  2:1184976‑M1/99‑48 (MQ=255)
                                              taatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgt                                                     <  2:463692‑M1/99‑48 (MQ=255)
                                                atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaa                                                   <  2:915356‑M1/99‑50 (MQ=255)
                                                 ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                  >  2:716767‑M1/1‑49 (MQ=255)
                                                 ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                  <  2:1879904‑M1/99‑51 (MQ=255)
                                                  tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                 <  2:1207978‑M1/99‑52 (MQ=255)
                                                  tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                 >  1:1780226‑M1/1‑48 (MQ=255)
                                                  tGAAATGATATTATTAATTCCACTGCCATTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                 <  2:251671‑M1/99‑52 (MQ=255)
                                                   gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                <  2:1483053‑M1/99‑53 (MQ=255)
                                                    aaaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcag                                               >  1:3548376‑M1/1‑46 (MQ=255)
                                                    aaaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactctaatcaa                                               >  2:3669585‑M1/1‑46 (MQ=255)
                                                      aTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaa                                             >  2:3840687‑M1/1‑44 (MQ=255)
                                                           attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                        >  2:3726570‑M1/1‑39 (MQ=255)
                                                             tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                      <  1:2110650‑M1/99‑63 (MQ=255)
                                                              attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaataagaaaagaaaga                                     >  1:3264635‑M1/1‑36 (MQ=255)
                                                              attaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataaccaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                     <  2:2749516‑M1/99‑64 (MQ=255)
                                                               ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                    <  2:2622454‑M1/99‑65 (MQ=255)
                                                                 aaTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacat                                  >  2:3559266‑M1/1‑33 (MQ=255)
                                                                  aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatgtcactactggaactgtaatcagacaagatagacatg                                 >  1:607688‑M1/1‑32 (MQ=255)
                                                                   ttCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                >  1:716562‑M1/1‑31 (MQ=255)
                                                                   ttCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                <  2:4002857‑M1/99‑69 (MQ=255)
                                                                      cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttgaattattgtgcatttcactactggaactgtaatcagaaaggatagacatactta                             >  2:228750‑M1/1‑28 (MQ=255)
                                                                      cACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                             >  2:3084635‑M1/1‑28 (MQ=255)
                                                                           ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaa                        >  2:1936198‑M1/1‑23 (MQ=255)
                                                                           ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgggcatttcactactggaactgtaatcagaaaagatagacatgcttagccaa                        >  1:3698955‑M1/1‑23 (MQ=255)
                                                                            cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaat                       <  1:2534319‑M1/99‑78 (MQ=255)
                                                                               tGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctc                    <  2:1216377‑M1/99‑81 (MQ=255)
                                                                                 gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                  <  2:866043‑M1/99‑83 (MQ=255)
                                                                                 gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                  >  2:114353‑M1/1‑17 (MQ=255)
                                                                                  tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                 <  2:1488300‑M1/99‑84 (MQ=255)
                                                                                  tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                 >  2:3526344‑M1/1‑16 (MQ=255)
                                                                                    gagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt               >  2:242004‑M1/1‑14 (MQ=255)
                                                                                      ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga             <  1:4034279‑M1/99‑88 (MQ=255)
                                                                                      ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga             <  2:2976218‑M1/99‑88 (MQ=255)
                                                                                      ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga             <  1:4294505‑M1/99‑88 (MQ=255)
                                                                                      ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga             <  1:2633466‑M1/99‑88 (MQ=255)
                                                                                      ggAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga             <  1:1367598‑M1/99‑88 (MQ=255)
                                                                                       gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat            >  2:3590903‑M1/1‑11 (MQ=255)
                                                                                       gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat            >  1:825990‑M1/1‑11 (MQ=255)
                                                                                          aGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattga         >  2:3798044‑M1/1‑8 (MQ=255)
                                                                                           gTGCTAAataataatcaattgttaaattattgttcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa        <  1:1073004‑M1/99‑93 (MQ=255)
                                                                                            tGCTAAataataatcaattgttaaattattgttcatttcactactggaactgtaatcagaaaagatacacatgcttagccaatctctatttgattgaat       >  2:1073345‑M1/1‑6 (MQ=255)
                                                                                            tGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagacaatctctatttgattgaat       <  2:2954772‑M1/99‑94 (MQ=255)
                                                                                               tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga    <  1:2482352‑M1/99‑97 (MQ=255)
                                                                                               tAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga    >  2:3141614‑M1/1‑3 (MQ=255)
                                                                                                aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa   <  2:1708124‑M1/99‑98 (MQ=255)
                                                                                                 aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  <  1:1651148‑M1/99‑99 (MQ=255)
                                                                                                 aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  >  1:849531‑M1/1‑1 (MQ=255)
                                                                                                 aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  <  1:1171015‑M1/99‑99 (MQ=255)
                                                                                                 aataataatcaattgttaaattattgtgcatttcactaccggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa  >  2:1610695‑M1/1‑1 (MQ=255)
                                                                                                 |                                                                                                  
CATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_000913/1299401‑1299596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.