New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3586434 | 53 (0.830) | 6 (0.100) | 6/316 | 5.6 | 12.0% | coding (390/1743 nt) | ggt | gamma‑glutamyltranspeptidase |
? | NC_000913 | = 3586844 | 38 (0.630) | intergenic (‑21/‑99) | ggt/yhhA | gamma‑glutamyltranspeptidase/DUF2756 family protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGCATTCCCGCCCTCCTTGAGAATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCC > NC_000913/3586608‑3587048 | ggCATTCCCGCCCTCCTTGAGAATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAggg < 1:609793/239‑1 (MQ=255) cATTCCCGCCCTCCTTGAGAATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 2:422990/1‑239 (MQ=255) aTTCCCGCCCTCCTTGAGAATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc < 1:422990/238‑1 (MQ=255) tCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 2:301813/1‑216 (MQ=255) tCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc < 1:301813/216‑1 (MQ=255) tCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGcc > 1:838016/1‑231 (MQ=255) tCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGcc < 2:838016/231‑1 (MQ=255) cccccACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAAct < 1:561427/239‑1 (MQ=255) cTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGt > 2:236486/1‑239 (MQ=255) tCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc > 2:508434/1‑172 (MQ=255) tCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGc < 1:508434/172‑1 (MQ=255) tCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTa > 1:845174/1‑239 (MQ=255) ttCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGATATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGat < 2:845174/238‑1 (MQ=255) aaGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTa < 1:766303/208‑1 (MQ=255) aaGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTa > 2:766303/1‑208 (MQ=255) cTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGaa > 1:11705/1‑239 (MQ=255) tACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACt > 2:191848/1‑231 (MQ=255) gaCGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACg > 2:745506/1‑239 (MQ=255) gggCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGaa < 2:26424/172‑1 (MQ=255) gggCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGaa > 1:26424/1‑172 (MQ=255) gcggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCt < 2:245101/112‑1 (MQ=255) gcggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCt > 1:245101/1‑112 (MQ=255) gcggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGat > 2:276795/1‑175 (MQ=255) gcggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGat < 1:276795/175‑1 (MQ=255) ggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAAcc > 1:208746/1‑104 (MQ=255) ggcggcggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAAcc < 2:208746/104‑1 (MQ=255) cggcgCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCTGCATTGc > 2:805769/1‑239 (MQ=255) gcgcTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGcac < 1:805769/239‑1 (MQ=255) gcTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAg < 1:191848/239‑1 (MQ=255) cTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAg < 2:11705/238‑1 (MQ=255) agagcagCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGaa < 1:236486/234‑1 (MQ=255) agcagcAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGat > 1:461124/1‑140 (MQ=255) agcagcAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGat < 2:461124/140‑1 (MQ=255) caATGGCCACCCGGCGTAAAACCGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTGTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt < 2:888154/197‑1 (MQ=255) caATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt > 1:888154/1‑197 (MQ=255) cACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCggg < 1:745506/238‑1 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGtt > 2:308695/1‑96 (MQ=255) ccGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGtt < 1:308695/96‑1 (MQ=255) gTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACCTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt < 1:139077/174‑1 (MQ=255) gTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACCTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGt > 2:139077/1‑174 (MQ=255) tCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACccagcc > 1:432125/1‑238 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTa > 2:580394/1‑191 (MQ=255) ggTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTa < 1:580394/191‑1 (MQ=255) cGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCggg > 1:906910/1‑208 (MQ=255) cGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCggg < 2:906910/208‑1 (MQ=255) aTTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGt < 2:484069/70‑1 (MQ=255) aTTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGt > 1:484069/1‑70 (MQ=255) | GGCATTCCCGCCCTCCTTGAGAATATCCACCCCCACCTGAGTGGCAGTGGCGTCCACAGACGCTACCATTCCCTGTTTCGCGCGTACCGGGTGGAAGACATCTTCCTCCACACCATACGAGACGGGCGGCGCAGGAGGCGCGGCGGCGGCGCTAAAACAACTTCCTGAGAGCAGAGCAGCAATGGCCACCCGGCGTAAAAACGTCGGTTTTATCATCGTTATTCTCCAGAGATTAAGGGGCAACCCCAGCTAAGCCTGGTATATAACTCTGAATTAATCATCGTTTTGTCGGGAAGCGAGTAAACTTAAAGGATATCTTCAGAGGAGGATACGCGATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCC > NC_000913/3586608‑3587048 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |