BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	419210 =	126 (0.940)	22 (0.180)	16/178	9.4	16.1%	intergenic (+26/‑381)	phoR/brnQ	sensory histidine kinase in two‑component regulatory system with PhoB/branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val
*	?	NC_000913	419234 =	115 (0.940)	22 (0.180)	16/178	9.4	16.1%	intergenic (+50/‑357)	phoR/brnQ	sensory histidine kinase in two‑component regulatory system with PhoB/branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 127 total aligned reads displayed.

TTCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGTTTTAT  >  NC_000913/419137‑419332

ttCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAATCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTAttt                                                                                                   >  2:1630634/1‑99 (MQ=255)

 tCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTAtttt                                                                                                  >  2:1148837/1‑99 (MQ=255)

  cAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTc                                                                                                 >  1:1522942/1‑99 (MQ=255)

   aGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCt                                                                                                <  2:1903941/99‑1 (MQ=255)

    gTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCtt                                                                                               <  2:1807364/99‑1 (MQ=255)

    gTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCtt                                                                                               <  2:2725235/99‑1 (MQ=255)

         gTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAg                                                                                          >  1:1329921/1‑99 (MQ=255)

         gTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAg                                                                                          >  2:2067889/1‑99 (MQ=255)

           tATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTc                                                                                        >  2:1751986/1‑99 (MQ=255)

            aTCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCa                                                                                       >  1:193194/1‑99 (MQ=255)

            aTCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCa                                                                                       <  2:2335098/99‑1 (MQ=255)

             tCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCaa                                                                                      >  1:1376235/1‑99 (MQ=255)

              cccGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCaaa                                                                                     <  1:396983/99‑1 (MQ=255)

               ccGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCaaaa                                                                                    <  1:2346608/99‑1 (MQ=255)

               ccGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCaaaa                                                                                    >  2:1946371/1‑99 (MQ=255)

               ccGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCaaaa                                                                                    >  1:932409/1‑99 (MQ=255)

                cGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGACTTATTTTCTTTGCAGTCAAAAt                                                                                   >  2:1239275/1‑99 (MQ=255)

                cGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTGTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCGTTGCAGTCAAAAt                                                                                   >  1:3137771/1‑99 (MQ=255)

                 ggAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATa                                                                                  <  1:916386/99‑1 (MQ=255)

                 ggAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATa                                                                                  <  1:244144/99‑1 (MQ=255)

                    aCGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACgg                                                                               <  2:782473/99‑1 (MQ=255)

                     cGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACggg                                                                              >  1:928321/1‑99 (MQ=255)

                     cGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACggg                                                                              <  1:1079259/99‑1 (MQ=255)

                      gTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGc                                                                             <  1:406090/99‑1 (MQ=255)

                       tttAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCg                                                                            >  2:1640078/1‑99 (MQ=255)

                       tttAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCg                                                                            >  2:318634/1‑99 (MQ=255)

                        ttAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGt                                                                           >  2:3198459/1‑99 (MQ=255)

                          aaTTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTa                                                                         >  2:1985311/1‑99 (MQ=255)

                           aTTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAg                                                                        >  2:2864158/1‑99 (MQ=255)

                             tGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGAt                                                                      <  1:1042625/99‑1 (MQ=255)

                              gCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGAtt                                                                     <  1:1546731/99‑1 (MQ=255)

                               ccAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGAttt                                                                    >  1:636689/1‑99 (MQ=255)

                                cAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGAtttt                                                                   >  2:2527781/1‑99 (MQ=255)

                                cAAAAACAGCGATTAATCCGCCTTT‑GCCATCTTTTATTGCCATAAGCCAGTCGATGCTAGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGAtttt                                                                   >  2:977467/1‑99 (MQ=255)

                                 aaaaaCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTa                                                                  >  1:2178658/1‑99 (MQ=255)

                                 aaaaaCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTa                                                                  >  1:1844055/1‑99 (MQ=255)

                                  aaaaCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTAc                                                                 >  1:1154397/1‑99 (MQ=255)

                                    aaCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACaa                                                               >  1:2741696/1‑99 (MQ=255)

                                    aaCAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACaa                                                               <  1:618336/99‑1 (MQ=255)

                                       aGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGa                                                            <  2:804452/99‑1 (MQ=255)

                                        gCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGAt                                                           <  2:1104873/99‑1 (MQ=255)

                                        gCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGAt                                                           <  2:363944/99‑1 (MQ=255)

                                         cGATTGATCCGCCTTTGGTAATC‑TTTATTTCCATAAGCCAGTGGATGCTCGCTTATTTTCATATCAGTCAAAATACGGGCGATAGCTTTTACAACgttc                                                          >  2:1895970/1‑96 (MQ=255)

                                          gATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTg                                                         <  1:2905844/99‑1 (MQ=255)

                                           aTTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTgg                                                        <  1:52256/99‑1 (MQ=255)

                                           aTTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTgg                                                        <  2:2091794/99‑1 (MQ=255)

                                            ttAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGt                                                       <  1:2579071/99‑1 (MQ=255)

                                              aaTCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGa                                                     <  1:649982/99‑1 (MQ=255)

                                               aTCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGAt                                                    <  2:1447271/99‑1 (MQ=255)

                                                  cGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGAtttt                                                 >  1:2544585/1‑99 (MQ=255)

                                                   gCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGAttttt                                                >  2:487508/1‑99 (MQ=255)

                                                    ccTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGAtttttt                                               <  2:3029079/99‑1 (MQ=255)

                                                    ccTTT‑GTCATCTTTGATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGAtttttt                                               <  1:860271/99‑1 (MQ=255)

                                                       tt‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGtt                                            <  1:1105081/99‑1 (MQ=255)

                                                           tCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGc                                         >  2:2638239/1‑99 (MQ=255)

                                                           tCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGc                                         <  1:1854968/99‑1 (MQ=255)

                                                            cATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCa                                        <  1:1997165/99‑1 (MQ=255)

                                                             aTCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCATTCAAAATACTGCCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCAt                                       <  2:64934/99‑1 (MQ=255)

                                                             aTCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCAt                                       <  1:3081725/99‑1 (MQ=255)

                                                             aTCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCAt                                       >  2:34982/1‑99 (MQ=255)

                                                             aTCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCAt                                       <  2:1351894/99‑1 (MQ=255)

                                                              tCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATg                                      >  1:3376738/1‑99 (MQ=255)

                                                              tCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATg                                      >  1:2453026/1‑99 (MQ=255)

                                                               cTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGa                                     >  1:3475226/1‑99 (MQ=255)

                                                               cTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGa                                     >  1:2148657/1‑99 (MQ=255)

                                                                ttttATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGac                                    >  1:260990/1‑98 (MQ=255)

                                                                ttttATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGAt                                    >  2:1177625/1‑99 (MQ=255)

                                                                ttttATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGAt                                    >  1:54948/1‑99 (MQ=255)

                                                                    aTTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGc                                <  2:1026169/99‑1 (MQ=255)

                                                                    aTTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGc                                <  2:3223171/99‑1 (MQ=255)

                                                                     ttGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGcc                               >  1:2714128/1‑99 (MQ=255)

                                                                      tGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCa                              >  1:1234198/1‑99 (MQ=255)

                                                                        ccATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATg                            >  1:1021279/1‑99 (MQ=255)

                                                                        ccATAAGCCAGTCGATGCCGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATg                            >  1:2965813/1‑99 (MQ=255)

                                                                          aTAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTc                          >  1:885106/1‑99 (MQ=255)

                                                                              gCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCtttt                      >  2:708479/1‑99 (MQ=255)

                                                                              gCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCtttt                      <  1:1332746/99‑1 (MQ=255)

                                                                               ccAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCttttt                     >  1:2641278/1‑99 (MQ=255)

                                                                                cAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTc                    >  1:3399522/1‑99 (MQ=255)

                                                                                 aGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCa                   <  2:864244/99‑1 (MQ=255)

                                                                                 aGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCa                   <  1:512889/99‑1 (MQ=255)

                                                                                  gTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCAc                  >  2:1326293/1‑99 (MQ=255)

                                                                                  gTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCAc                  <  2:1210086/99‑1 (MQ=255)

                                                                                    cGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACgg                <  1:100645/99‑1 (MQ=255)

                                                                                    cGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACgg                <  2:1228865/99‑1 (MQ=255)

                                                                                     gATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGa               <  2:128101/99‑1 (MQ=255)

                                                                                      gtGCTGGCTGATTTTCTTTGCAGTCAATATTCGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCGTGATGAGCCATGTCTTTTTCACGGaa              <  2:653530/98‑1 (MQ=255)

                                                                                      aTGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCTTGTCTTTTTCACGGaa              >  2:458833/1‑99 (MQ=255)

                                                                                       tGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGaaa             <  2:2810729/99‑1 (MQ=255)

                                                                                        gCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAAt            <  1:958651/99‑1 (MQ=255)

                                                                                        gCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAAt            >  2:1564265/1‑99 (MQ=255)

                                                                                         cTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATa           >  1:2245645/1‑99 (MQ=255)

                                                                                         cTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATa           <  1:1322714/99‑1 (MQ=255)

                                                                                          tGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAg          <  1:2625568/99‑1 (MQ=255)

                                                                                             cTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAgtgt       >  1:2461331/1‑99 (MQ=255)

                                                                                             cTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAgtgt       <  1:1254063/99‑1 (MQ=255)

                                                                                              ttATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGtt      >  2:1420802/1‑99 (MQ=255)

                                                                                               tATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGttt     <  1:1586905/99‑1 (MQ=255)

                                                                                                aTTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGtttt    <  2:2334350/99‑1 (MQ=255)

                                                                                                 ttttCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGTTTta   <  1:3015282/99‑1 (MQ=255)

TTCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAATCCGCCTTT‑GTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCAAAATACGGGCGTTAGATTTTACAACGATTGGTGATTTTTTGTTCGCATGATTAGCCATGTCTTTTTCACGGAAATAGTGTTTTAT  >  NC_000913/419137‑419332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.