New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =20 (0.150)88 (0.780) 61/164 0.7 84.3% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 16 (0.140)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 147 total aligned reads displayed.

CGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT  >  NC_000913/1209523‑1209717
                                                                                                |                                                                                                  
gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGt                                                                                                  <  1:1438652‑M2/3‑1 (MQ=255)
gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGt                                                                                                  <  2:2858529‑M2/3‑1 (MQ=255)
  tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGttt                                                                                                <  2:1644429‑M2/5‑1 (MQ=255)
    aacaccaccaatcataaccggtatagctatgaaaccggtgcgtccttatgtagccgtcgcttcattgagttttgctccttctcccaatccaaCGTTTAt                                                                                              <  2:1629563‑M2/7‑1 (MQ=255)
       accaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaa                                                                                           >  1:626692‑M2/90‑99 (MQ=255)
        ccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaa                                                                                          <  1:1008876‑M2/11‑1 (MQ=255)
         caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                         >  2:2669933‑M2/88‑99 (MQ=255)
         caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                         >  1:1730325‑M2/88‑99 (MQ=255)
         caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGCTTATGaaaa                                                                                         >  1:918548‑M2/88‑99 (MQ=255)
          accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                        <  2:1811553‑M2/13‑1 (MQ=255)
          accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTGATGAAAAt                                                                                        <  2:512931‑M2/13‑1 (MQ=255)
           ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctctttctcccaaaccaaCGTTTATGAAAATg                                                                                       <  2:3390951‑M2/14‑1 (MQ=255)
           cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATg                                                                                       >  1:179514/1‑99 (MQ=255)
              atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaag                                                                                    <  1:1302235‑M2/17‑1 (MQ=255)
                 ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                 <  1:1634650‑M2/20‑1 (MQ=255)
                 ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                 >  1:400699‑M2/80‑99 (MQ=255)
                  taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                <  2:986394‑M2/21‑1 (MQ=255)
                   aaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATa                                                                               <  2:3398866‑M2/22‑1 (MQ=255)
                      cggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgccttgagtcttgctccttctcccaaaccatCGTTTATGAAATTGAAGAAATAACa                                                                            <  2:3201468‑M2/25‑1 (MQ=255)
                         tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAACAAATAACAAGc                                                                         <  1:2988016‑M2/28‑1 (MQ=255)
                             ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                     <  2:1734093/99‑1 (MQ=255)
                             gctatgaaaccggtgcgtcctaatgtagccgttgctgcatttagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                     <  1:3338895‑M2/32‑1 (MQ=255)
                              ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctgccaaacctaCGTTTATGAAAATGGAGGAATATCAAGCAAATg                                                                    >  2:2061251‑M2/67‑99 (MQ=255)
                              ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                    >  2:547616‑M2/67‑99 (MQ=255)
                              ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                    >  2:545007‑M2/67‑99 (MQ=255)
                              ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                    >  2:3212417‑M2/67‑99 (MQ=255)
                                atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                  >  1:976613‑M2/65‑99 (MQ=255)
                                atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                  >  2:1532075‑M2/65‑99 (MQ=255)
                                   aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                               >  1:554187‑M2/62‑99 (MQ=255)
                                   aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcacccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                               >  1:1122342‑M2/62‑99 (MQ=255)
                                       cggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                           >  2:2877187‑M2/58‑99 (MQ=255)
                                         gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                         <  1:1860523/99‑1 (MQ=255)
                                          tgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                        <  2:1850900‑M2/45‑1 (MQ=255)
                                           aGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                       <  2:2357208/99‑1 (MQ=255)
                                           aGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                       <  1:1642953/99‑1 (MQ=255)
                                            ggCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                      <  2:2475316/99‑1 (MQ=255)
                                             gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtt                                                     >  2:617910/1‑99 (MQ=255)
                                              tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                    >  1:3165774‑M2/51‑99 (MQ=255)
                                              tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                    <  1:344966‑M2/49‑1 (MQ=255)
                                                 taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                 <  2:2195069‑M2/52‑1 (MQ=255)
                                                 taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                 <  1:221634‑M2/52‑1 (MQ=255)
                                                   atgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCa                                               <  2:1816355‑M2/54‑1 (MQ=255)
                                                    tgtagccgttgctgcattgagttttgctccctctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                              <  2:1616792‑M2/55‑1 (MQ=255)
                                                     gtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                             >  1:398245‑M2/44‑99 (MQ=255)
                                                           gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                       >  1:829612‑M2/38‑99 (MQ=255)
                                                             tgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                     <  2:2578802‑M2/64‑1 (MQ=255)
                                                              gctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                    <  2:838275‑M2/65‑1 (MQ=255)
                                                               ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                   <  2:616526‑M2/66‑1 (MQ=255)
                                                               ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                   <  2:1538839‑M2/66‑1 (MQ=255)
                                                               ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                   <  1:2215133‑M2/66‑1 (MQ=255)
                                                               cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                   >  1:2428726/1‑99 (MQ=255)
                                                               cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCGTTTACCGGGGGGATTTAAc                                   >  1:3316478/1‑99 (MQ=255)
                                                                tgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                  >  1:1766536‑M2/33‑99 (MQ=255)
                                                                 gcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                 >  1:1458805‑M2/32‑99 (MQ=255)
                                                                  cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                >  1:1574094‑M2/31‑99 (MQ=255)
                                                                  cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                >  1:1098106‑M2/31‑99 (MQ=255)
                                                                  cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                <  1:2722706‑M2/69‑1 (MQ=255)
                                                                   attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                               <  1:1317364‑M2/70‑1 (MQ=255)
                                                                    ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                              >  1:2000282‑M2/29‑99 (MQ=255)
                                                                     tgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCtt                             <  1:1004799‑M2/72‑1 (MQ=255)
                                                                     tgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCtt                             >  1:1027662‑M2/28‑99 (MQ=255)
                                                                        gttttgctccttcccccaaaccaaCGTCTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                          <  2:2302136‑M2/75‑1 (MQ=255)
                                                                         ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCTTCATTACTGCTTCTACCAGGGGGATTTAACATGCTTATTg                         >  2:3272633‑M2/24‑99 (MQ=255)
                                                                         ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                         <  2:1078772‑M2/76‑1 (MQ=255)
                                                                         ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                         >  1:2722721‑M2/24‑99 (MQ=255)
                                                                         ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGAGATTTAACATGCTTATTg                         <  2:803618‑M2/76‑1 (MQ=255)
                                                                          tttgttccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                        <  2:2222035‑M2/77‑1 (MQ=255)
                                                                          tttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                        <  2:1574076‑M2/77‑1 (MQ=255)
                                                                          tttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                        <  2:2712301‑M2/77‑1 (MQ=255)
                                                                           ttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                       <  1:2011454‑M2/78‑1 (MQ=255)
                                                                           cAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                       >  1:3360902/1‑99 (MQ=255)
                                                                            tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                      <  1:2918251‑M2/79‑1 (MQ=255)
                                                                              ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt                    <  1:3087054‑M2/81‑1 (MQ=255)
                                                                               tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATg                   >  2:1950029‑M2/18‑99 (MQ=255)
                                                                               gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATg                   <  2:3158722/99‑1 (MQ=255)
                                                                                ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                  <  1:810474‑M2/83‑1 (MQ=255)
                                                                                ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                  >  1:2941549‑M2/17‑99 (MQ=255)
                                                                                cctactcccaaaccaaCGTTTATGAAAATGAAGAAATAACAACCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                  <  1:3463745‑M2/83‑1 (MQ=255)
                                                                                  ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                >  1:1158842‑M2/15‑99 (MQ=255)
                                                                                  ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                <  1:556565‑M2/85‑1 (MQ=255)
                                                                                    ctcctaaacaaaCGTTTATGAACATGAAGAAATAACAAGCAAATGGAATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc              <  1:1190020‑M2/87‑1 (MQ=255)
                                                                                    ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc              <  2:2127652‑M2/87‑1 (MQ=255)
                                                                                    ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc              <  2:1888523‑M2/87‑1 (MQ=255)
                                                                                     tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg             >  2:1409916‑M2/12‑99 (MQ=255)
                                                                                     tcccaaaccaaCGTTTATAATAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg             >  1:2963222‑M2/12‑99 (MQ=255)
                                                                                      cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGt            >  2:1193466‑M2/11‑99 (MQ=255)
                                                                                      cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGt            >  2:1192942‑M2/11‑99 (MQ=255)
                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa           >  1:2981704‑M2/10‑99 (MQ=255)
                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa           <  1:1870012‑M2/90‑1 (MQ=255)
                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa           >  1:3393119‑M2/10‑99 (MQ=255)
                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa           >  1:2417443‑M2/10‑99 (MQ=255)
                                                                                       ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa           >  2:2331361‑M2/10‑99 (MQ=255)
                                                                                         aaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc         <  1:606798‑M2/92‑1 (MQ=255)
                                                                                            ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac      <  2:904135‑M2/95‑1 (MQ=255)
                                                                                             caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaaca     <  2:863743‑M2/96‑1 (MQ=255)
                                                                                              aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaacaa    >  1:1424648‑M2/3‑99 (MQ=255)
                                                                                              aaCGTTTATGAAAAAGAAGAAATAACAAGGAAATGGCATCATTCGTGCTTTTACCAGGGGGATTTAACATGATTATTGGCTATGTACGCGTATcaacaa    >  1:3022054/1‑99 (MQ=255)
                                                                                                cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt  <  2:2032325/99‑1 (MQ=255)
                                                                                                cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt  <  1:286656/99‑1 (MQ=255)
                                                                                                cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt  <  2:74241/99‑1 (MQ=255)
                                                                                                |                                                                                                  
CGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT  >  NC_000913/1209523‑1209717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.