| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,206,446 | 0 | C | A | 36.1% | 77.7 / 21.2 | 62 | intergenic (‑190/‑17) | ttdR/ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (14/25); new base A (7/15); total (22/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCC > NC_000913/3206225‑3206672 | aaGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑cc < 2:43326/238‑1 (MQ=255) tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GAATTTTTCATACCAAAACAAAAAATAGAG‑TTT‑cccttgttag > 2:1399195/1‑231 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑a < 1:344817/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑a < 1:1399195/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTGAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCATTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATGCAAAAACTGGAG‑TTG‑CCATGATGAGCG‑a < 2:1103467/238‑1 (MQ=255) tATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGtaataa < 2:657997/236‑1 (MQ=255) agaaacGTTAATTAGCCGCGGTTGTGGTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAgg < 2:1199249/234‑1 (MQ=255) atagTTAATTATACGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACGAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCa < 1:226500/235‑1 (MQ=255) aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCa < 1:328120/238‑1 (MQ=255) ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAg < 1:1137394/239‑1 (MQ=255) ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTCA‑ACAAATACCAAAAATGGAG‑TTT‑GCATGATTAGGG‑AGAGTAAAAAACAACAAGCAAAGAATaaagtta > 2:959922/1‑234 (MQ=255) cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAACTGGAGTTTG‑CCTTG‑TGGGGG‑GAAGTAATAAACAAAAAGAAGTGAAGAAGTTTAc > 2:1137394/1‑239 (MQ=255) tgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCg < 1:1182739/197‑1 (MQ=255) tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATAAAAAAAATGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAACAACAAGAAGTGAATAAATTGACAGAGATTGTCGCTAACttt > 1:806084/1‑238 (MQ=255) aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAAAACAAAAAATGGAG‑TTG‑TCATGATGAGCG‑GAAAAAAAAAACAAAAAACAATGAAAAAAATGACAGAGATTGTCGCTAAATTTTACCCCATGAt > 1:644471/1‑239 (MQ=255) aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAGACAAATACAAAAAAAGGAG‑TTG‑CCATGATGAGGG‑AAAGGAAAAAGCAAAAGGCAGTGAATAAATTGACAGAGATTGTCGCTAACTTTACCGCCATGAttt > 1:1081542/1‑239 (MQ=255) tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAc > 1:73443/1‑142 (MQ=255) tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAc < 2:73443/142‑1 (MQ=255) ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑c < 1:141465/155‑1 (MQ=255) cATTCCCTGCTCTGGCAAAATATTCATTTTTTTTTTCGCTTTGATTCACAAACTGTTAATTACATATTCACGGTGCCAAAAAATAAAAAACCACATTTTTAGTGGTATTTTGTGGCGGTG‑AATTTTTCAAAACAAATAAAAAAACGGGAG‑TTC‑CCAGGATGAGCA‑AAATAAAAAAGAAACAGGCAGTAAATAAGTTGACGGGGTTTGGCGCTAACTTTACCGCCATGATTTCTACCCGa < 2:644471/239‑1 (MQ=255) ttCCCTGCTCTGGCGCAATATTTATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCA‑AAAGTAATAAGCACCAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt < 1:1131368/239‑1 (MQ=255) ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTCAAAAAAAAAAAAAAAAAGGGG‑GTG‑CCCTGGTGAgg > 2:141465/1‑154 (MQ=255) tctGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCGCGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGGGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga‑tg < 1:836720/239‑1 (MQ=255) gcgaAATATTCTTTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTATTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCAGGATGAGCG‑AAAGTAATAAGCAACGGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga‑tg < 1:1104414/235‑1 (MQ=255) ttttcatttTTATTTTCGCGTGAATTCACAAACTTTTAATTACATTTTCGCGGTGGAAAAAAATAAAAACCCACATTTTTAGTGGTATTTTGGGGAGGTA‑ATTTTTCCCAAGAAAATAAAAAAACGGGTG‑TTG‑CCATGAGGAGCG‑AAAGTAAAAAGCAACAGGCAGTAAAAAAGTTGAAAGGTTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGa < 2:1065640/237‑1 (MQ=255) tatTCATTGTTATTTTCGGGTTGATTCACTAACTGTTAATTACATTTTCACGGTGTAAAAAAATATAAACCCAAATTTAGAGTGTTAGTTTGTGGCGGTA‑AATTTTGCCAGAAAAATACAAAAAGGGGGG‑TTG‑CAATGATGGGCG‑AAAGTAAAAAACAACGGGAGGTAAATAAGTGGACAGAGTTTGTCGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGa < 1:467247/239‑1 (MQ=255) tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAc < 1:843027/119‑1 (MQ=255) ttaattcTTATTTTCGCTTTAATTCACAAATTTTTAATTACATATTCGGGGGGGAAAAAAATAAAAACCCACATTTTTAGTGGTAGTGTGGGGGGGGA‑AATTTTACAAGAAAAATAAAAAAACTGGGG‑TTG‑CCATGATGGGGG‑AAAAAAATAAGCAAGAGGCGGTAAATAAGTGGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga‑tg < 2:684085/224‑1 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTT‑GATTTTTTCCGACAAATACAAAAACTGGa > 2:843027/1‑119 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCGCCAAAAACAAAAACTGGAG‑TTG‑TCATGATGAGCG‑AAAAAAATAAACAACAAGCAGTGAATAAGATGACAGAGATTTTCGCTAAATTTACCGCCCTGATTTTTACCCCCATGCCCGC‑TGACGTGGTGGGTAAAcataaa > 1:952433/1‑234 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATAAAAAAAATGGGG‑TTG‑CCCTGATGAGCG‑AAAGTAAAAAGCAACAAGCAGTGAATAAGTTGACAGAGAATGTTGGTAAATTTAACGCCATGAATTTTACCCGAAAGCCTGAGTGAGGGGGGGGA‑AAACTaaaa > 1:783142/1‑239 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGAGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTaaa > 1:1065640/1‑238 (MQ=255) ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAAAACAAAAAAAGGAG‑TTG‑CCCTGATGAGCG‑GAAATAAAAAAAAAAAAGCAGTGAATAAATTTACAGAGATTGTTGCTAAACTTTCCGCCCAGATTTTTAACCCAAAGCCTGA‑TGTAGtggtggg > 1:684085/1‑226 (MQ=255) tGATTCACAACCGGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGGGGGGGTG‑AATTTTTCCAAAAAAATACAAAAACTGGAG‑TTC‑CCATGATGAGCA‑AAAGTAATAAACAACAGGCAGTGAATAAGTTGAGAGATGTTGTCGCAACCTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAgg < 1:978855/238‑1 (MQ=255) tCACGAACTGTTAATTACATATTCAGGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATAAAAAAACTGGAG‑TTG‑CCATGATGAGCA‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGAt < 1:1153044/184‑1 (MQ=255) ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAg < 1:1263024/95‑1 (MQ=255) ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCa < 1:1375985/130‑1 (MQ=255) ttAATTACATATCCACGGTGGAAAAAAATATAAACCCACATTTTTGGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGAAAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAgg < 1:55017/224‑1 (MQ=255) taaaTTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGGGGTG‑AATTTTTCCAGAAAAATAAAAAAACTGGGG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGCCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGa < 1:1180531/202‑1 (MQ=255) tAATTACATATTCCGGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGAAAAATAAAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAAcgt < 1:660901/235‑1 (MQ=255) aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCG‑CATTTTTTCAGACAAAAAAAAAAACACGAG‑ATGCCCTTGAT‑AGCG‑GAAGTAAAAAACAAAACGAAATGAATAAATTTAACAAGATTTTGCCTAAACTTATCGCCAATATTTTTAccc > 1:556721/1‑180 (MQ=255) ttttCACGGGGGAAAAAAAAAAAAAACCAAATTTTTGGTGGTAGTTGGGGGGGGTA‑AATTTTTCCAGAAAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 2:806084/237‑1 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GAATTTTTCAAACCAAAACAAAAAATGGAG‑TTT‑CCATTATGGGCG‑GAAGTAATAAACAACACGCAGTGAAAAAATTTAGAGAGATTGTCGTGCACTTTAACGCCCCGATTTTTTACCGAATGCCTGG‑TTACGCGGGGGGTAAACTcaaa > 2:1180531/1‑204 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAAACAAAAACAAAAAAAGGAG‑GTG‑GCatgat > 2:1263024/1‑95 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATTTTTTATACAAATATAAAAAAATGAG‑GTG‑GCATGATGAGTG‑AAAATAATAAAGAACAAGCCGTGAATaaat > 2:1375985/1‑128 (MQ=255) ttCAGGGTGGAAAAAAATATAAAACCAAATTTTTAGTGGTAGTTTGGGGCGGTG‑AATTTTCCCAGAAAAATAAAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCAAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATggg < 1:959922/235‑1 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGACAAATACAAAAAATGGAG‑TTG‑CCCTGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAAGTGACAGAGATTGTCGCTAACTTTACCGCCCTGATTTCTACCCGAAAGCCTGA‑TGACGTGGTGGGTAAAATAAAACAGCTAAAGGATGCCGAAACGCCGTCGCTGGGGGAAATTATCt > 1:1138003/1‑239 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCAGAAAAATAAAAAAAATGGAG‑TTG‑GCATGATGAGCG‑AAAGGAATAAACAACAAGCAGTGAAAAAATTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAAAAGCTAAAGGATGCCGAAACGTCGTCGATGGGGGAAAATATCt > 1:188456/1‑239 (MQ=255) aaTATAAAACCACATTGGTAGTGGTAGTTTGGGGCGGTG‑AATTTATCAAGAAAAAAAAAAAAATTGGAG‑TGG‑CCAAGAGGAGCA‑AAAGGAAAAAGCAACGGGCAGTAAAAAAGTGGGGGGAGATGGGGGTTAAGTTGACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 1:30137/239‑1 (MQ=255) tataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTg < 1:416959/105‑1 (MQ=255) caTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTTCCCACAAAAAAAAAAAATTGGG‑TTT‑TCCTTGTGGGGG‑AAAAAAAAAAACAAAAAGCAGAGAAAAAGTTGa > 2:416959/1‑105 (MQ=255) aTTTTTAGTGGTATTTGGTGGCGGTG‑ATTTTTTCCAAAAAAAAAAAAAAACTGGAT‑TTC‑CCATGAGGAGGG‑AAAGTAAAAAGCAACAGGGAGAAAATAAGTTGACAGAGATTGTCGATAACTTTACCGCCATGATTTTTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:1292486/209‑1 (MQ=255) aTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCg < 1:825127/71‑1 (MQ=255) aTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTC‑CCATGATGGACG‑AAGGTAATAACCAACAGCCGGTGAACAGGTGGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGa < 1:692536/165‑1 (MQ=255) aTTTTTAGTGGTAGTTGGTGGTGGTA‑AATTTTTCCAAAAAAATAAAAAACGTGAAT‑TTG‑CCATTATAAGCC‑AAAGTAATAAGCACCGGGCAGAGAAAAAGTGGCCAGTGTTCGCCCTTACCTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:238716/209‑1 (MQ=255) gTAGTTTGTGGCGGTG‑AATTTTTTCAGACCAAAAAAAAAAAAGGAG‑GTT‑GCATGATTGGGG‑AAAGgaaaaa > 2:825127/1‑71 (MQ=255) gTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGtaat < 1:1087276/69‑1 (MQ=255) aGTTTGGGGCGGTA‑ATTTTTCCCAAAAAAATAAAAAAACTGGAG‑TTG‑CCATGATGAGCA‑AAAGTAAAAAGCAACAGGAAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 2:1138003/239‑1 (MQ=255) aGTTAGTGGCGGTA‑AATTTTACAAAAAAAAAAAAAAAACTGAAG‑TTG‑CAATGA‑GAGGGAAAAGTAATAACCAACGGTAAGTAAATAAGTGGAAAGAGGTTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 2:502055/239‑1 (MQ=255) gTTTGTGGCGGTG‑AATTTTTCCAGACAAATAAAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGAAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa < 1:513664/118‑1 (MQ=255) tttgggggtgTG‑AATTTTTCAAGAAAAATACAAAAACTGGAT‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAtt < 2:783142/230‑1 (MQ=255) cGGTG‑AATTTTTCCAGAAAAATAAAAAAACGGGAG‑TTG‑CCAGGATGAGCG‑AAAGAAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga‑tg < 2:582632/134‑1 (MQ=255) ttCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGa > 1:582632/1‑134 (MQ=255) taaaaaaaaaTAAAAAAACGGGAG‑TGG‑CAATGAGGAGCG‑AAAGTAAAAACAAACGGGCAGTAAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc < 2:1081542/232‑1 (MQ=255) aaaTACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc > 1:505213/1‑232 (MQ=255) | AAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTTTTCCAGACAAATACAAAAACTGGAG‑TTG‑CCATGATGAGCG‑AAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGA‑TGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCC > NC_000913/3206225‑3206672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |