Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,088,259 A→C intergenic (+399/‑25) metK → / → galP S‑adenosylmethionine synthetase/D‑galactose transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,088,2590AC100.0% 267.9 / NA 68intergenic (+399/‑25)metK/galPS‑adenosylmethionine synthetase/D‑galactose transporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (38/30);  total (38/30)

ACAAAGATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTCGGTGC  >  NC_000913/3088032‑3088489
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      
aCAAAGATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTTATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCat                                                                                                                                                                                                                             >  1:566200/1‑239 (MQ=255)
aCAAAGATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCat                                                                                                                                                                                                                             >  1:645407/1‑239 (MQ=255)
     gATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTGAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 <  2:157742/230‑1 (MQ=255)
     gATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   <  1:3503/228‑1 (MQ=255)
     gATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   <  2:1185891/228‑1 (MQ=255)
     gATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAAc                                                                                                                                                                                                                                <  2:645407/231‑1 (MQ=255)
          gTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGc                                                                                                                                                                                                                   <  2:547182/239‑1 (MQ=255)
            aaTATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGcat                                                                                                                                                                                                                 <  2:1062301/239‑1 (MQ=255)
                   tCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATg                                                                                                                                                                                                             >  1:34175/1‑236 (MQ=255)
                                                                             cAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCtt                                                                                                                                                 >  1:153712/1‑238 (MQ=255)
                                                                                  aaCAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGct                                                                                                                                           <  2:566200/239‑1 (MQ=255)
                                                                                     aGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 <  1:333615/150‑1 (MQ=255)
                                                                                     aGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 >  2:333615/1‑150 (MQ=255)
                                                                                       cGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAggg                                                                                                                                                                                         >  2:475350/1‑188 (MQ=255)
                                                                                       cGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAggg                                                                                                                                                                                         <  1:475350/188‑1 (MQ=255)
                                                                                       cGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGc                                                                                                                                      >  1:713570/1‑239 (MQ=255)
                                                                                          ttAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGGTTTTCGTCTGCTTCCTTGCCGCTCTGGCggg                                                                                                                                   >  2:1034436/1‑239 (MQ=255)
                                                                                                   gatgatATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   >  2:1014991/1‑134 (MQ=255)
                                                                                                   gatgatATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   <  1:1014991/134‑1 (MQ=255)
                                                                                                       atatAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTgg                                                                                                                       >  1:719855/1‑238 (MQ=255)
                                                                                                            aCTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 >  1:1035821/1‑127 (MQ=255)
                                                                                                            aCTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 <  2:1035821/127‑1 (MQ=255)
                                                                                                                aaTTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGATTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATAACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGACTGGATATc                                                                                                             >  1:69790/1‑239 (MQ=255)
                                                                                                                  ttattTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAg                                                                                                                                                                                                                      <  2:1042503/132‑1 (MQ=255)
                                                                                                                  ttattTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAg                                                                                                                                                                                                                      >  1:1042503/1‑132 (MQ=255)
                                                                                                                          aTGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 >  1:332324/1‑113 (MQ=255)
                                                                                                                          aTGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 <  2:332324/113‑1 (MQ=255)
                                                                                                                                  aaaTCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGgcgc                                                                                            >  1:1117571/1‑238 (MQ=255)
                                                                                                                                        tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 >  2:117128/1‑99 (MQ=255)
                                                                                                                                        tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATaa                                                                                                                                                                                                                                 <  1:117128/99‑1 (MQ=255)
                                                                                                                                        tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAg                                                                                                                                                                                                                      >  1:1040580/1‑110 (MQ=255)
                                                                                                                                        tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAg                                                                                                                                                                                                                      <  2:1040580/110‑1 (MQ=255)
                                                                                                                                             aaGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATacaaaa                                                                                                                                                                                                                                    <  1:574285/91‑1 (MQ=255)
                                                                                                                                             aaGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATacaaaa                                                                                                                                                                                                                                    >  2:574285/1‑91 (MQ=255)
                                                                                                                                              aGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTAtt                                                                               >  2:1137465/1‑239 (MQ=255)
                                                                                                                                                 tAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTg                                                                              <  2:153712/237‑1 (MQ=255)
                                                                                                                                                   aaTGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTTTTTTGCCTGGATATCGGTGTAATTGCTTGCGCCCTTCCGTTTTTTGCCGAt                                                                         >  1:405950/1‑239 (MQ=255)
                                                                                                                                                         aGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTAATGAAGATGAAt                                                                     >  1:320963/1‑238 (MQ=255)
                                                                                                                                                             tAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAAtt                                                                    >  1:251218/1‑235 (MQ=255)
                                                                                                                                                               aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTTGCGCACTGCCGTTTATTGCAGATGAATTCCAGAt                                                              >  1:147869/1‑239 (MQ=255)
                                                                                                                                                                   aTTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACt                                                          >  1:103352/1‑239 (MQ=255)
                                                                                                                                                                     tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTc                                                                   <  1:939454/228‑1 (MQ=255)
                                                                                                                                                                     tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTc                                                                   >  2:939454/1‑228 (MQ=255)
                                                                                                                                                                            aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCgg                                                                                                                                    <  2:461274/156‑1 (MQ=255)
                                                                                                                                                                            aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCgg                                                                                                                                    >  1:461274/1‑156 (MQ=255)
                                                                                                                                                                             tgtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACg                                                 <  1:1137465/238‑1 (MQ=255)
                                                                                                                                                                              gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGc                                                                                                                      >  2:243172/1‑168 (MQ=255)
                                                                                                                                                                              gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGc                                                                                                                      <  1:243172/168‑1 (MQ=255)
                                                                                                                                                                                      cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   >  1:693995/1‑51 (MQ=255)
                                                                                                                                                                                      cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAAt                                                                                                                                                                                                                                   <  2:693995/51‑1 (MQ=255)
                                                                                                                                                                                           caTCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTAATCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTa                                  >  1:1108774/1‑239 (MQ=255)
                                                                                                                                                                                            aTCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGcc                                                                                      <  1:645801/186‑1 (MQ=255)
                                                                                                                                                                                            aTCTTTTTACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGcc                                                                                      >  2:645801/1‑186 (MQ=255)
                                                                                                                                                                                                 tttACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat                                                                                                              <  1:1109858/157‑1 (MQ=255)
                                                                                                                                                                                                 tttACGTCGTACTCACCTATCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat                                                                                                              >  2:1109858/1‑157 (MQ=255)
                                                                                                                                                                                                          tACTCACCTATCTTAATTCGCAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTGCTCTTTGGc                                                                                                                      <  1:176842/140‑1 (MQ=255)
                                                                                                                                                                                                                    tCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGc                                                                                                                      <  1:47033/130‑1 (MQ=255)
                                                                                                                                                                                                                    tCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGc                                                                                                                      >  2:47033/1‑130 (MQ=255)
                                                                                                                                                                                                                    tCTTAATTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGGGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTAATTCGCACACGCAAGAATGGGTTGGAAGCTCCAATATGTTCgggggg             >  2:605520/1‑231 (MQ=255)
                                                                                                                                                                                                                         aTTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGa                                                                                                                                                                     >  1:256761/1‑78 (MQ=255)
                                                                                                                                                                                                                         aTTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGa                                                                                                                                                                     <  2:256761/78‑1 (MQ=255)
                                                                                                                                                                                                                         aTTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTTCTCTTTGGCCTTGGTATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACCTTCCCCACGCAAGAATTGGTCGTAAGCTCCAGGATGTTCGTGGGGGCAGTcggg    >  2:697770/1‑238 (MQ=255)
                                                                                                                                                                                                                         aTTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat                                                                                                              >  2:439624/1‑133 (MQ=255)
                                                                                                                                                                                                                         aTTCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat                                                                                                              <  1:439624/133‑1 (MQ=255)
                                                                                                                                                                                                                          ttCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTcggtg   <  1:605520/239‑1 (MQ=255)
                                                                                                                                                                                                                           tCACAATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTcggtgc  >  1:1183566/1‑239 (MQ=255)
                                                                                                                                                                                                                              caATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGAt                                                                         >  1:127611/1‑165 (MQ=255)
                                                                                                                                                                                                                              caATACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGAt                                                                         <  2:127611/165‑1 (MQ=255)
                                                                                                                                                                                                                               aaTACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCa                                                                                           <  1:1158723/146‑1 (MQ=255)
                                                                                                                                                                                                                               aaTACAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCa                                                                                           >  2:1158723/1‑146 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      
ACAAAGATTTGTAATATTTTCATATTATTATTCGGTTTTCACAGTTGTTACATTTCTTTTCAGTAAAGTCTTAATTGCAGATAACAGCGTTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTCGGTGC  >  NC_000913/3088032‑3088489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: