Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,198,644	A→C	F333C (TTC→TGC)	glnE ←	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,198,644	0	A	C	100.0%	206.5 / NA	58	F333C (TTC→TGC)	glnE	fused deadenylyltransferase/adenylyltransferase for glutamine synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (26/32);  total (26/32)

ACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGAACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGTTAGCATAGACGCCTTCGCTATCGCCCATAATCC  >  NC_000913/3198423‑3198857                                                                                                                                                                                                                              |                                                                                                                                                                                                                      aCGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAAt                                                                                                                                                                                                      >  2:890016/1‑239 (MQ=255)                 aTTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATg                                                                                                                                                                                       >  2:1115307/1‑238 (MQ=255)                          atcaGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTgcg                                                                                                                                                                              >  1:864429/1‑238 (MQ=255)                                aggaagCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAg                                                                                                                                                                         <  2:883309/237‑1 (MQ=255)                                 ggaagCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGttt                                                                                                                                                                      >  1:1134681/1‑239 (MQ=255)                                    agCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGat                                                                                                                                                                   >  2:296389/1‑239 (MQ=255)                                         cgtggTTTGTTCGTCGTTAATTCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGt                                                                                                                                                              <  2:864429/236‑1 (MQ=255)                                                  ttCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTg                                                                                                                                                               >  2:169469/1‑229 (MQ=255)                                                  ttCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTg                                                                                                                                                               <  1:169469/229‑1 (MQ=255)                                                            aTGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACg                                                                                                                                           <  1:808471/239‑1 (MQ=255)                                                            aTGCTTTGCAGCAGGTTTGCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGGGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACg                                                                                                                                           <  2:829113/239‑1 (MQ=255)                                                                 ttGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACt                                                                                                                                       >  2:770837/1‑238 (MQ=255)                                                                   gcagcaGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGcc                                                                                                                                                                            >  2:961096/1‑199 (MQ=255)                                                                   gcagcaGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCACGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGcc                                                                                                                                                                            <  1:961096/199‑1 (MQ=255)                                                                        agGTTTTCCAGGCGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACg                                                                                                                                  <  1:694178/236‑1 (MQ=255)                                                                        agGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGGGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACgg                                                                                                                                 <  2:56324/237‑1 (MQ=255)                                                                            tttCCAGCCGCCGCAGGAACAGGTACGCCCCGCGCAATTTTTCAGCTTCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCTTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACggg                                                                                                                                <  2:1168017/234‑1 (MQ=255)                                                                              tCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAatcat                                                                                                                         <  1:1115307/239‑1 (MQ=255)                                                                                    cgccgcAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTAGACGCACTTCACGGGCAatcatc                                                                                                                        >  2:693411/1‑234 (MQ=255)                                                                                              aCAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcg                                                                                                          <  2:1127051/238‑1 (MQ=255)                                                                                                 gATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGc                                                                                                      >  1:988774/1‑239 (MQ=255)                                                                                                   tACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGa                                                                                                    <  1:296389/239‑1 (MQ=255)                                                                                                   tACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGa                                                                                                    <  2:1057221/239‑1 (MQ=255)                                                                                                      gCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAGCGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCg                                                                                                     >  2:878771/1‑235 (MQ=255)                                                                                                       ccACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAatcat                                                                                                                         >  2:677814/1‑214 (MQ=255)                                                                                                       ccACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAatcat                                                                                                                         <  1:677814/214‑1 (MQ=255)                                                                                                           tCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATc                                                                                             >  1:172733/1‑238 (MQ=255)                                                                                                            cGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCAc                                                                                           >  1:930330/1‑239 (MQ=255)                                                                                                               aaTTGTTCATCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCt                                                                                        <  1:711096/239‑1 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACg                                                                                                                                  <  2:633709/187‑1 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACg                                                                                                                                  >  1:633709/1‑187 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         <  1:1155661/212‑1 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         >  2:1155661/1‑212 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         >  2:681225/1‑212 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         <  1:681225/212‑1 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATc                                                                                  >  1:331293/1‑235 (MQ=255)                                                                                                                         cATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATg                                                                              >  1:584777/1‑239 (MQ=255)                                                                                                                              ttttCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcg                                                                                                          >  1:563253/1‑206 (MQ=255)                                                                                                                              ttttCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcg                                                                                                          <  2:563253/206‑1 (MQ=255)                                                                                                                                 tCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAacgacg                                                                      <  2:584777/239‑1 (MQ=255)                                                                                                                                          aGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAGCGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGaaaa                                                                 <  1:878771/235‑1 (MQ=255)                                                                                                                                                          tGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATcgca                                             <  2:930330/239‑1 (MQ=255)                                                                                                                                                              tcTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATcgcacgca                                         <  1:1096903/238‑1 (MQ=255)                                                                                                                                                                 gAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         >  1:737628/1‑172 (MQ=255)                                                                                                                                                                 gAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTgcgc                                                                                                         <  2:737628/172‑1 (MQ=255)                                                                                                                                                                 gAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACt                                      <  1:693411/239‑1 (MQ=255)                                                                                                                                                                   gCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATcgca                                             >  1:773952/1‑230 (MQ=255)                                                                                                                                                                   gCGTTGGCAGTAAAGAGCGCGATGGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATcgca                                             <  2:773952/230‑1 (MQ=255)                                                                                                                                                                       tGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGTTa                                 <  1:678128/238‑1 (MQ=255)                                                                                                                                                                            gTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCa                                                                                                                                                        >  1:1089812/1‑114 (MQ=255)                                                                                                                                                                            gTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCa                                                                                                                                                        <  2:1089812/114‑1 (MQ=255)                                                                                                                                                                                   gcgcGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCACCATCGCACGCAACTCGTTAGCATAGACGCCt                     >  1:217915/1‑238 (MQ=255)                                                                                                                                                                                    cgcgATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAatcat                                                                                                                         >  2:1097381/1‑137 (MQ=255)                                                                                                                                                                                    cgcgATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAatcat                                                                                                                         <  1:1097381/137‑1 (MQ=255)                                                                                                                                                                                    cgcgATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGt                                   >  2:100436/1‑223 (MQ=255)                                                                                                                                                                                    cgcgATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGt                                   <  1:100436/223‑1 (MQ=255)                                                                                                                                                                                         ttGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGTTAGCATAGACGCCTTCGCTAt              <  2:1134681/239‑1 (MQ=255)                                                                                                                                                                                                      tCGCGTCCGCCGCGAATGAGCTGGCACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGTTAGCATAGACGCCTTCGCTATCGCCCATAATcc  <  2:172733/238‑1 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                      ACGCCAGCCGCGCACGATTAAGCTCATCAGAAGGAAGCGTCTGGGTTTGTTCGTCGTTAATGCTTTGCAGCAGGTTTTCCAGACGCCGCAGGAACAGATACGCCACTCGCAATTGTTCAGCATCGTTTTCAGAAAGCAGATGCAGCTCGGCAATGGCGCTGAGCGTTGGCAGTAAAGAGCGCGATTGCAGCGACGGTTCGCGTCCGCCGCGAATGAGCTGGAACACCTGAACGATAAATTCAATTTCGCGAATGCCGCCTGCGCCGAGTTTGATATTGTCGGTCAAACCACGTCGACGCACTTCACGGGCAATCATCCCTTTCATGTTGCGCAGCGACTGAATCACGCTGAAATCGATGTAACGACGGAAAACAAACGGGCGCAGCATCGCACGCAACTCGTTAGCATAGACGCCTTCGCTATCGCCCATAATCC  >  NC_000913/3198423‑3198857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑