| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,667,825 | A→C | W8G (TGG→GGG) | hcaT ← | putative 3‑phenylpropionic transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,667,825 | 0 | A | C | 77.2% | 140.5 / 60.7 | 79 | W8G (TGG→GGG) | hcaT | putative 3‑phenylpropionic transporter |
| Reads supporting (aligned to +/- strand): ref base A (8/10); new base C (36/25); total (44/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01 | |||||||||||
GGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACTCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATG > NC_000913/2667589‑2668061 | ggCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCgc > 2:242220/1‑239 (MQ=255) aCAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGt > 1:202952/1‑239 (MQ=255) gcagTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCCCCAGAAAGGGAGAAAAATGCCGTAACTAAAAAAGGATGTGAAATAGCCGAGCGCCAACCCGCGCGAGGATTGCAAAACCATGAg > 1:1105730/1‑238 (MQ=255) aggggcAGCACGCGCAAGGCGGAAATCAGGGGGGAAGGGTCCCTGACGCGGGGCCCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGGCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCa < 2:1134078/227‑1 (MQ=255) cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagga > 2:1038196/1‑239 (MQ=255) cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagga > 1:271981/1‑239 (MQ=255) aGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCg < 2:202952/239‑1 (MQ=255) aGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGGCAGGAGGCg < 1:199427/239‑1 (MQ=255) aaTCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCt < 2:588249/239‑1 (MQ=255) gCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCACAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGTGGCAAGTTGAAAAATAAGa > 2:579092/1‑239 (MQ=255) aaaCGCCCGAGGAAACGGGCAACCAGCCCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAGCCCGCGCGTGGATTGCAAAACCATGAGTCCCGCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGa < 1:238430/237‑1 (MQ=255) acgcccGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAatat > 2:278493/4‑239 (MQ=255) gggCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTc > 2:444450/1‑238 (MQ=255) cAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCg < 1:689923/238‑1 (MQ=255) aaCCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGAt < 1:1038196/239‑1 (MQ=255) aCCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATg < 2:1148820/239‑1 (MQ=255) ccAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTccc > 2:139450/1‑234 (MQ=255) ccTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATg < 2:1083748/233‑1 (MQ=255) ccccAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGc < 1:242220/238‑1 (MQ=255) ccccAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGGGCCTGCTTCCCGATGTCTGTAACGc < 1:61213/238‑1 (MQ=255) gCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGc > 1:557551/1‑238 (MQ=255) gCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGt > 2:305123/1‑139 (MQ=255) gCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGt < 1:305123/139‑1 (MQ=255) ccGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTcaca < 1:139450/234‑1 (MQ=255) ccGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAga > 2:593086/1‑236 (MQ=255) ccGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAg < 1:444450/236‑1 (MQ=255) gATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTa < 1:716095/239‑1 (MQ=255) aTGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAACATTCGAGCCTGCTTCCCGATGTCTGTAACGCAAGTTCACAAGCACTaa > 1:565726/1‑239 (MQ=255) aTGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTaa > 2:904773/1‑239 (MQ=255) gCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTgaga > 2:447817/1‑239 (MQ=255) tAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATcc > 2:922545/1‑238 (MQ=255) aTCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCa > 1:958422/1‑239 (MQ=255) ttAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGc > 1:1179946/1‑239 (MQ=255) aGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaata > 1:298222/1‑239 (MQ=255) aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGt > 2:989655/1‑113 (MQ=255) aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGt < 1:989655/113‑1 (MQ=255) aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaataat > 2:864185/1‑239 (MQ=255) aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaataat > 1:9248/1‑239 (MQ=255) aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaataat > 2:1159080/1‑239 (MQ=255) cGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaata < 2:958422/236‑1 (MQ=255) cGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaata < 2:1105730/236‑1 (MQ=255) aGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAAGGCCAGTTCACAAGCACTAAAAAACTGAGATCAGAGACGCATGTTGCAAAAATAATACGTAAt > 2:1045936/1‑239 (MQ=255) aaagTAAAAAAATGGCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTa < 1:435362/235‑1 (MQ=255) ggTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATg > 2:622446/1‑238 (MQ=255) ggTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATg > 1:645478/1‑238 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGt < 1:1043388/167‑1 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGt > 2:1043388/1‑167 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTa < 1:411977/234‑1 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTa > 2:411977/1‑234 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTAt > 2:1072234/1‑235 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTAt > 1:1173586/1‑235 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTAt > 2:1115635/1‑235 (MQ=255) tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAACATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTa < 2:565726/234‑1 (MQ=255) aaGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACAATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAACAATAAGAATATTCGAGCCTGCTTCCCGATGTCCGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGAGACGCATGTCGCAACAATAAGGCGTAATTAt > 2:250499/2‑235 (MQ=255) aGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCg < 1:278493/238‑1 (MQ=255) aaTGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGc < 2:271981/239‑1 (MQ=255) gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCtt > 1:957473/1‑238 (MQ=255) gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCtt > 2:111300/1‑238 (MQ=255) gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCt < 1:1052537/92‑1 (MQ=255) gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCt > 2:1052537/1‑92 (MQ=255) gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCtt > 2:385304/1‑238 (MQ=255) tAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATTCCGTTACGCTTGCCaa > 1:924020/1‑239 (MQ=255) aaCTAAAAAAGTATGTGAAATAGCCGGGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa < 1:460969/239‑1 (MQ=255) aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa < 1:1072234/239‑1 (MQ=255) aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa < 2:645478/239‑1 (MQ=255) aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa < 1:286289/239‑1 (MQ=255) aaaaaGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagg < 1:200258/70‑1 (MQ=255) aaaaaGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagg > 2:200258/1‑70 (MQ=255) aaaaaGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTc < 2:1179946/239‑1 (MQ=255) tgtgAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAg > 1:96199/1‑156 (MQ=255) tgtgAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAg < 2:96199/156‑1 (MQ=255) tgtgAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGt < 1:1056581/72‑1 (MQ=255) tgtgAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGt > 2:1056581/1‑72 (MQ=255) tAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATg > 2:1050178/1‑192 (MQ=255) tAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATg < 1:1050178/192‑1 (MQ=255) aGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGTCGATg > 2:826844/1‑239 (MQ=255) aGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATg > 2:1007128/1‑239 (MQ=255) gAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGaaa > 2:234550/1‑238 (MQ=255) ccAGCGCTTGGATTGCAAAACCATGATTCCCTCCCGTCAGGAAGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGGTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATg < 2:261559/239‑1 (MQ=255) | GGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACTCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATG > NC_000913/2667589‑2668061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |