New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3426836 =NA (NA)61 (0.300) 27/184 15.4 NA intergenic (‑53/+122) rrlD/alaU 23S ribosomal RNA of rrnD operon/tRNA‑Ala
?NC_000913 3426854 = NA (NA)intergenic (‑71/+104) rrlD/alaU 23S ribosomal RNA of rrnD operon/tRNA‑Ala
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 141 total aligned reads displayed.

ATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTA  >  NC_000913/3426755‑3426944
                                                                                                   |                                                                                          
aTCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCa                                                                                            >  2:3868341/1‑100 (MQ=33)
 tCCACCGTGTAGGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCACAGTTGCGAAAATTTGAGATACACAGGCACAACTTTCGTTGTTCAg                                                                                           >  1:5206971/1‑100 (MQ=11)
  ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAGGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt                                                                                          >  2:5394645/1‑100 (MQ=21)
  ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt                                                                                          >  1:3507862/1‑100 (MQ=34)
  ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt                                                                                          >  1:3358688/1‑100 (MQ=34)
  ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt                                                                                          >  1:3072908/1‑100 (MQ=34)
  ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt                                                                                          <  1:297153/100‑1 (MQ=34)
   cACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtg                                                                                         <  2:512092/100‑1 (MQ=34)
   cACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtg                                                                                         <  2:1968721/100‑1 (MQ=34)
    aCCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtgt                                                                                        >  1:2173720/1‑100 (MQ=34)
     ccGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGtt                                                                                       <  1:4626594/100‑1 (MQ=34)
     ccGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGtt                                                                                       >  2:219408/1‑100 (MQ=34)
        tgtACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCa                                                                                    >  1:3322243/1‑100 (MQ=34)
        tggaCGCTTAGTCGCGTAACCTCGCAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCa                                                                                    <  2:1299875/97‑1 (MQ=255)
         gtACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGttggaa                                                                                   >  2:3187011/1‑96 (MQ=18)
          tACGCTTAGTCGCTTAACCTCACAAGCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTGAGTGTTTCAAt                                                                                  >  2:4388649/1‑100 (MQ=255)
            cGCTTAGTGGGTTAACCTCACAGCCCGACGGTGTTTCACTTCAGGGTTGCGAAAATTTGAGAGGCTCACGGACAACTTTCGGTGTTCAGTGGTTCAAgtt                                                                                <  2:1084995/100‑1 (MQ=11)
            cGCTTAGTCGCTTCACCTCACAACCCGAAGACGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAAttt                                                                                <  2:4312269/100‑1 (MQ=255)
            cGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAAttt                                                                                <  1:4077432/100‑1 (MQ=34)
            cGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAAttt                                                                                <  2:1641641/100‑1 (MQ=33)
            cGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAAttt                                                                                <  1:5117545/100‑1 (MQ=34)
              cTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGATACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTc                                                                              <  2:2344832/100‑1 (MQ=21)
              cTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTc                                                                              >  1:5345348/1‑100 (MQ=34)
              cTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTc                                                                              <  2:2737241/100‑1 (MQ=33)
              cTTAGACGCATAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACGCTCGTTGTTCAGTGTTTCAATTTTc                                                                              >  2:75278/1‑100 (MQ=11)
                tAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAg                                                                            <  1:4002898/100‑1 (MQ=34)
                tAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAg                                                                            >  1:1461741/1‑100 (MQ=33)
                tAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAg                                                                            <  1:4406660/100‑1 (MQ=34)
                 aGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGGGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGc                                                                           >  1:3237887/1‑100 (MQ=18)
                 aGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGc                                                                           <  2:4756494/100‑1 (MQ=33)
                 aGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGc                                                                           >  1:1253091/1‑100 (MQ=34)
                  gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCt                                                                          >  2:3602207/1‑100 (MQ=34)
                  gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCt                                                                          <  2:2455645/100‑1 (MQ=34)
                  gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCt                                                                          <  1:1052437/100‑1 (MQ=34)
                  gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCt                                                                          <  2:5273063/100‑1 (MQ=34)
                    cGCTTAACCTCACAACCCGAAGATGTTTCACTTGAGATTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGGTGGGCAGTGTTTCAATTGTCATCTTg                                                                        >  2:3022059/1‑100 (MQ=11)
                    cGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTg                                                                        >  2:393195/1‑100 (MQ=34)
                    cGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTAGTTGTTCAGTGTTTCAATTTTCAGCTTg                                                                        <  1:4897762/100‑1 (MQ=21)
                     gCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGa                                                                       <  2:381955/100‑1 (MQ=34)
                      cTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGAt                                                                      <  1:4326519/100‑1 (MQ=33)
                       ttAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATc                                                                     <  1:169192/100‑1 (MQ=34)
                        tAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATcc                                                                    >  1:4693344/1‑100 (MQ=34)
                        tAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATcc                                                                    >  2:2365132/1‑100 (MQ=33)
                          aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAGCTTTCGTTGTTCAGTGTTTCAATTTTCAGCATGATCCAg                                                                  >  1:5309304/1‑100 (MQ=255)
                          aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAg                                                                  >  2:1376756/1‑100 (MQ=34)
                           ccTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGa                                                                 >  2:2234392/1‑100 (MQ=33)
                            cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt                                                                >  1:4386208/1‑100 (MQ=34)
                            cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt                                                                <  1:3635713/100‑1 (MQ=34)
                            cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt                                                                <  2:4893183/100‑1 (MQ=34)
                            cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt                                                                >  2:3379937/1‑100 (MQ=33)
                            cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt                                                                <  1:1587288/100‑1 (MQ=34)
                             tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtt                                                               <  1:1477135/100‑1 (MQ=34)
                               acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGTCTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtttt                                                             <  2:3761718/100‑1 (MQ=21)
                               acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtttt                                                             <  1:3208996/100‑1 (MQ=34)
                               acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtttt                                                             <  1:4012027/100‑1 (MQ=34)
                                caACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAttttt                                                            <  2:4606701/100‑1 (MQ=34)
                                   cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa                                                         >  1:2791513/1‑100 (MQ=34)
                                   cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa                                                         >  2:1844770/1‑100 (MQ=33)
                                   cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa                                                         >  1:563786/1‑100 (MQ=34)
                                   cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa                                                         >  2:1438002/1‑100 (MQ=33)
                                   cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa                                                         <  1:3227519/100‑1 (MQ=34)
                                    ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag                                                        <  2:906685/100‑1 (MQ=34)
                                    ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag                                                        <  2:3766013/100‑1 (MQ=34)
                                    ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag                                                        <  1:1062153/100‑1 (MQ=34)
                                     cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAaga                                                       >  2:2646514/1‑100 (MQ=34)
                                     cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAaga                                                       <  1:2305890/100‑1 (MQ=34)
                                     cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAaga                                                       >  2:1036125/1‑100 (MQ=34)
                                     cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAaga                                                       >  2:3508438/1‑100 (MQ=34)
                                     cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAaga                                                       <  2:3422689/100‑1 (MQ=34)
                                         gATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaa                                                   <  1:2013206/100‑1 (MQ=34)
                                          aTGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGTACAACTTTCGGTGGTCAGTGTTTCAATTTTCAGCTTGATCTAGATTTTTAAAGAGCaaa                                                  >  2:676943/1‑100 (MQ=11)
                                          aTGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaaa                                                  <  2:3450629/100‑1 (MQ=34)
                                            gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAc                                                >  1:1059365/1‑100 (MQ=37)
                                            gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAc                                                >  2:575280/1‑100 (MQ=37)
                                            gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAc                                                <  2:1718285/100‑1 (MQ=37)
                                            gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAc                                                >  2:2628429/1‑100 (MQ=35)
                                            gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAAc                                                >  2:3123313/1‑100 (MQ=37)
                                             tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACt                                               <  1:4257830/100‑1 (MQ=38)
                                             tttCACTTCAGAGTTGCGAAAATGTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACt                                               >  2:1223858/1‑100 (MQ=255)
                                              ttCACTTCAGAGTTTCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCCTGATCCAGATTTTTAAAGAGCAAAACtt                                              >  2:2433265/1‑100 (MQ=255)
                                              ttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACtt                                              >  2:2463799/1‑100 (MQ=39)
                                              ttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACtt                                              >  2:5391848/1‑100 (MQ=39)
                                              ttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACtt                                              >  2:2169709/1‑100 (MQ=39)
                                               tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTc                                             <  2:1462390/100‑1 (MQ=40)
                                               tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTc                                             >  2:5000568/1‑100 (MQ=40)
                                                cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCg                                            <  2:2936055/100‑1 (MQ=40)
                                                 aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGc                                           >  2:2952998/1‑100 (MQ=39)
                                                 aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGc                                           <  2:2234106/100‑1 (MQ=39)
                                                  cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCa                                          >  1:4608390/1‑100 (MQ=38)
                                                  cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCa                                          >  1:3873372/1‑100 (MQ=38)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGGTCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         <  1:643311/100‑1 (MQ=37)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         <  2:3230181/100‑1 (MQ=37)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         >  1:1315973/1‑100 (MQ=37)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         <  1:3568584/100‑1 (MQ=37)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         >  2:3164716/1‑100 (MQ=37)
                                                   ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAg                                         <  1:965429/100‑1 (MQ=37)
                                                     cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTg                                       <  1:4570236/100‑1 (MQ=34)
                                                      agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGTTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGa                                      >  2:1812486/1‑100 (MQ=18)
                                                        agTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAAc                                    <  1:3714313/100‑1 (MQ=31)
                                                                                          tccttgttCAGTGTTTCAATTTTCAGCTTGATCCAGCTTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTtttattta  <  1:5082157/97‑1 (MQ=0)
                                                                                                   |                                                                                          
ATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTA  >  NC_000913/3426755‑3426944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.