| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,186,531 | T→G | I394M (ATT→ATG) | rpoC → | RNA polymerase, beta prime subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,186,531 | 0 | T | G | 99.1% | 825.9 / ‑4.5 | 232 | I394M (ATT→ATG) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (116/113); total (118/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 232 total aligned reads displayed.
GTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATTAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAACACCCGGTACTGCTGAACCGTGCA > NC_000913/4186434‑4186627 | gTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGaa < 2:5051184/100‑1 (MQ=255) cTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAg > 1:3336395/1‑100 (MQ=255) tGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGc > 2:3679004/1‑100 (MQ=255) cAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCga > 2:1967024/1‑100 (MQ=255) aGTGCGGTCTGCCGAAGAAACTGGATCTGGAGCTGTTCAAACCGTTCCTCTCCAGCCAGCTGGAACTGCGTGGTCTTGCTCCCACCATGAACGCTGCgac < 2:536158/100‑2 (MQ=255) gTGCGGTCTGCCGAAGCAAATGGCACTGGAGATGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCgacg > 1:1927958/1‑98 (MQ=255) gTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCgaag > 2:779577/1‑100 (MQ=255) gTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCgaag < 2:3639780/100‑1 (MQ=255) gTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCgaag > 2:4029164/1‑100 (MQ=255) tCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATg < 1:2306247/100‑1 (MQ=255) gCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGtt > 1:5137923/1‑100 (MQ=255) gCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGtt > 1:633649/1‑100 (MQ=255) gCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGtt > 1:4369122/1‑100 (MQ=255) gCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGtt < 2:563157/100‑1 (MQ=255) tcGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTg < 2:2305338/99‑1 (MQ=255) ccGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTg > 2:4085548/1‑100 (MQ=255) cGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTgc > 2:2857698/1‑99 (MQ=255) cGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGa > 2:3164038/1‑100 (MQ=255) cGAAGAAAATGGCACTGGAGCGGTTCAAACCGTTCATCTACGACAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGa > 1:5263094/1‑100 (MQ=255) agaaAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAgcg < 1:4237815/100‑1 (MQ=255) agaaAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAgcg < 1:1670142/100‑1 (MQ=255) gaaAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAgcgc > 1:2099358/1‑100 (MQ=255) gCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGaagaag < 2:2664146/100‑1 (MQ=255) cACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGc < 2:5067192/100‑1 (MQ=255) cACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGc > 1:3175744/1‑100 (MQ=255) cACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGc > 2:317617/1‑100 (MQ=255) cACTGGAGCTGTTCAAACCGATCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGc < 2:17832/100‑1 (MQ=255) aCTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCt < 2:1701391/100‑1 (MQ=255) aCTGGAGCTGTTCAAACCGTTCAACTACGGCAAGCTGGAACTGCGTGGCCTTGCTACCACCATGAAAGCTGCGAACCAAATGGTTGACCGCGCAGCAGCt > 2:685193/1‑100 (MQ=255) cTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTg < 1:44445/100‑1 (MQ=255) cTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTg > 2:1654371/1‑100 (MQ=255) tGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGt > 1:1583405/1‑100 (MQ=255) ggAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTc < 1:2684974/100‑1 (MQ=255) ggAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTc < 1:3914368/100‑1 (MQ=255) gCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTATCACCATGAAGGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGtt < 2:5358063/100‑1 (MQ=255) gCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGtt > 2:1790103/1‑100 (MQ=255) gCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGtt > 1:1230531/1‑100 (MQ=255) tGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTg < 2:4869129/100‑1 (MQ=255) tGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTg > 1:292188/1‑100 (MQ=255) tGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTg > 1:4302100/1‑100 (MQ=255) tGTTCAAACCGTCCATCTACGGCCAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGACGAAGCTGTCGTTTg < 2:383802/100‑1 (MQ=255) gTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTgg > 1:3702029/1‑100 (MQ=255) gTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTgg < 2:1108416/100‑1 (MQ=255) ttCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTggg < 2:4262632/100‑1 (MQ=255) tCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATTAAATCTGCGAAGAAAATGGTTGAGCGCGCAGACGCTGTCGTTTGGGa > 2:3285287/1‑100 (MQ=255) tCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGa < 1:2273284/100‑1 (MQ=255) tCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGa < 1:5118046/100‑1 (MQ=255) aaCCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGatat > 1:583618/1‑100 (MQ=255) aCCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATc < 1:5335522/100‑1 (MQ=255) ccGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATcc > 1:3437486/1‑100 (MQ=255) ttCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTgg < 1:2330486/100‑1 (MQ=255) cATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGGAGCTGTCGTTTGGGATATCCTGGAc < 2:2544216/100‑1 (MQ=255) cATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGAc < 2:1610847/100‑1 (MQ=255) aTCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAATAAGCTGTCGCTTGGGATACCCTGGACg > 2:5256805/1‑100 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt < 2:3115570/100‑1 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt < 2:2941767/100‑1 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt < 1:3309830/100‑1 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt > 2:4423775/1‑100 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt < 1:2708543/100‑1 (MQ=255) aCGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGt < 2:4119210/100‑1 (MQ=255) cGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGtt > 1:4587968/1‑100 (MQ=255) gtcAAGCTGGAACGGCGGGGTCTTTCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTa > 2:3029615/3‑100 (MQ=255) gCAAGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTAt > 1:937505/1‑100 (MQ=255) cAAGCTGGAACTGCGTGGTCTTGCTACCACCATGACAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCCGTCGTTTGGGATATCGTTGACGAAgccatc > 2:3233523/1‑95 (MQ=255) aGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCcg < 2:4685928/100‑1 (MQ=255) aGCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAACCTGTCGTTTGGGATATCCTGGACGAAGCTATCcg > 2:739885/1‑100 (MQ=255) gCTGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCcgc > 2:4573119/1‑100 (MQ=255) tGGAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGa < 1:3159081/100‑1 (MQ=255) ggAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGac < 1:314062/100‑2 (MQ=255) gAACTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGCTATCCGCGacc > 2:4281749/1‑98 (MQ=255) aaCTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAcca < 2:5480116/100‑1 (MQ=255) aaCTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAcca > 1:5442629/1‑100 (MQ=255) cTGCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGaccacc < 1:3573742/100‑1 (MQ=255) gCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCg < 1:4681200/100‑1 (MQ=255) gCGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGCTGAGCGCGAAGAAGCTGTCCCTTGGGATATCCTCGACGAAGTTATCCGCGACCACCCg > 2:3401706/1‑100 (MQ=255) cGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCgg < 1:521080/100‑1 (MQ=255) cGTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCgg < 2:2166917/100‑1 (MQ=255) gTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGt < 1:1499842/100‑1 (MQ=255) gTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGt < 2:1439033/100‑1 (MQ=255) gTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGt > 2:2488388/1‑100 (MQ=255) gTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGt > 1:4499299/1‑100 (MQ=255) gTGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGt < 1:3852384/100‑1 (MQ=255) tGGTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGCTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTa > 1:2495008/1‑100 (MQ=255) ggTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTAc < 2:3736825/100‑1 (MQ=255) ggTCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTAc < 1:768392/100‑1 (MQ=255) tCTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTActg < 1:1479532/100‑1 (MQ=255) cTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTActgc > 2:5019549/1‑100 (MQ=255) cTTGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTActgc < 2:3352985/100‑1 (MQ=255) tGCTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTActgctg < 1:5516357/100‑1 (MQ=255) cTACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGaa > 1:2997516/1‑100 (MQ=255) tACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAAc > 1:4929293/1‑100 (MQ=255) tACCACCATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAAc < 2:1266132/100‑1 (MQ=255) accaccATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAAcc > 1:3619927/1‑100 (MQ=255) accaccATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAAcc > 1:1659237/1‑100 (MQ=255) accaccATGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAAcc > 1:4642229/1‑100 (MQ=255) ccaccaTGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAACCg < 1:798144/100‑1 (MQ=255) ccaccaTGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAACCg > 1:1019794/1‑100 (MQ=255) accaTGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAACCGTg > 1:4108126/1‑100 (MQ=255) accaTGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAACCGTg < 2:581650/100‑1 (MQ=255) caTGAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGACCACCCGGTACTGCTGAACCGTGCa > 1:2153614/1‑100 (MQ=255) | GTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATTAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAACACCCGGTACTGCTGAACCGTGCA > NC_000913/4186434‑4186627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |