| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 619,006 | A→C | G251G (GGA→GGC) | fepE → | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 619,006 | 0 | A | C | 99.0% | 676.9 / ‑2.0 | 195 | G251G (GGA→GGC) | fepE | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (89/103); total (90/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01 | |||||||||||
Only 100 of 196 total aligned reads displayed.
AAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGAA > NC_000913/618909‑619102 | aagaaaaaCTGGCTCAGGATGGCATTAAAACGAAAAATCAACTTGATGCAAACACTCAGCGCCTCAATTCTTCACTCGACATTGCCAACGCGGCAGGCAt > 2:1616214/1‑100 (MQ=255) gaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTa < 2:5350087/100‑1 (MQ=255) aaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTaaa < 1:1490968/100‑1 (MQ=255) cTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGc > 1:1580411/1‑100 (MQ=255) tGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACAGTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGcc < 2:1238647/100‑1 (MQ=255) tGGCTCAGGATCGAAAAAAAACAAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGcc < 2:790836/100‑1 (MQ=255) ggCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGccc > 2:1002238/1‑100 (MQ=255) cTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGt > 2:3252724/1‑100 (MQ=255) cTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGt > 1:311391/1‑100 (MQ=255) cTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGt > 2:4697747/1‑100 (MQ=255) cTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGt > 2:4778294/1‑100 (MQ=255) tCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGtt > 2:521716/1‑100 (MQ=255) cAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCCCTCGACATTGCCAACGCGGCAGGCCTTAAAAAGCCCGttt > 2:3294984/1‑100 (MQ=255) cAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGttt < 2:4053602/100‑1 (MQ=255) cAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGttt > 2:2686765/1‑100 (MQ=255) taaTCGCATTAAAACGCAAAATCACCTAGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTAc < 2:403038/98‑1 (MQ=255) ggATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTAc < 1:450045/100‑1 (MQ=255) ggATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTAc > 1:5500697/1‑100 (MQ=255) gATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACa > 1:776604/1‑100 (MQ=255) aTCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAg < 1:4758352/100‑1 (MQ=255) cGCATTAAAACGAGAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTa < 2:4982723/100‑1 (MQ=255) cGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCCACGCGGCAGGCATTAAAAAGCCCGTTTACAGTa > 2:4362780/1‑100 (MQ=255) gCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTaa > 2:2039415/1‑100 (MQ=255) cATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAAt > 1:2651200/1‑100 (MQ=255) aTTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATg < 2:1449592/100‑1 (MQ=255) aTTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATg > 2:348723/1‑100 (MQ=255) aTTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATg < 1:4256126/100‑1 (MQ=255) aTTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATg < 1:3747547/100‑1 (MQ=255) ttAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATgg > 1:1046428/1‑100 (MQ=255) ttAAAACGAAAAAACAACTTGATGCAAAGATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATgg > 1:4902754/1‑100 (MQ=255) aaaaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTc > 2:564712/1‑100 (MQ=255) aaaaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTc < 1:2211412/100‑1 (MQ=255) aaCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAg < 2:3976589/100‑1 (MQ=255) aCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAgg > 2:1067547/1‑100 (MQ=255) aCGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAgg > 1:879233/1‑100 (MQ=255) aaaTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGtt < 1:4125695/100‑1 (MQ=255) aaTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTa > 1:3890173/1‑100 (MQ=255) aTCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaa < 1:4056352/100‑1 (MQ=255) tCAACTTGATGCAAACATTCAGCGCCTCACTTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTaaa < 1:5089675/100‑1 (MQ=255) cAACTGGAGGCAGACATTCAGCGCTTCAGTTAGTTGCTAGTCATTGCCAGCGCGGCTGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCTTTAAAg < 2:3268456/100‑1 (MQ=255) aaCTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGa < 1:460190/100‑1 (MQ=255) aaCGTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGa < 2:2340555/100‑1 (MQ=255) aCTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGAt < 2:3903608/100‑1 (MQ=255) cTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGaag > 1:4395832/1‑98 (MQ=255) cTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATg > 2:1763642/1‑100 (MQ=255) ttGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGa < 2:2107036/100‑1 (MQ=255) tGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGAc < 2:4846757/100‑1 (MQ=255) gCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCg > 2:246707/1‑100 (MQ=255) cAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGa > 1:2267996/1‑100 (MQ=255) cAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGa > 1:2352499/1‑100 (MQ=255) aaCATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAtt < 2:3431593/100‑1 (MQ=255) accttCAGCGCCTCAATTATTCACTCGCCATTGCAAACGCGGCAGGCATTCTAACGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAttt < 1:2400449/97‑1 (MQ=255) cATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAtttt < 1:3283229/100‑1 (MQ=255) aTTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGAttttt > 1:3178834/1‑100 (MQ=255) ttCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTc < 1:2685442/100‑1 (MQ=255) cAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa < 1:1122627/100‑1 (MQ=255) cAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa > 1:102624/1‑100 (MQ=255) cAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTa < 1:342826/100‑1 (MQ=255) aGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTAt > 2:1047119/1‑100 (MQ=255) cTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctc < 1:1335018/100‑1 (MQ=255) cTCAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctc > 1:1896134/1‑100 (MQ=255) cAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctctc > 1:2458811/1‑100 (MQ=255) cAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctctc < 2:1574559/100‑1 (MQ=255) cAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctctc < 1:2558318/100‑1 (MQ=255) cAATTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTtctctc < 1:2299344/100‑1 (MQ=255) aaTTATTCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCg < 2:3364679/100‑1 (MQ=255) attattCACTCGACATTGCCAACGCGGCAGGCATTCAAAATCCCGTTTACAGTAATGGTCAGGCCGGTACAGATGACCCCGATTTTTCTATTTCTCTCgg > 2:2908478/1‑100 (MQ=255) attattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCgg > 2:2191163/1‑100 (MQ=255) ttattCACTCGACATTTCCACCGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGt < 2:4161583/100‑1 (MQ=255) ttattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTTTTTCGGt > 2:4331349/1‑100 (MQ=255) tattCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTg < 2:3833698/100‑1 (MQ=255) attCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGc < 2:5125396/100‑1 (MQ=255) attCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGc > 2:333945/1‑100 (MQ=255) attCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGc < 1:1828602/100‑1 (MQ=255) ttCACTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCa < 1:5393659/100‑1 (MQ=255) cACTCGACGCTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACGGTAATGGTCAGGCCGTTAAAGATGTCCCCGATTTTTCTATTTCTCTCGGGGCAGa < 2:1896011/100‑1 (MQ=255) aCTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGAc < 1:1303923/100‑1 (MQ=255) cTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACg > 1:5199653/1‑100 (MQ=255) cTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACg > 1:986842/1‑100 (MQ=255) cTCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACg > 2:2415496/1‑100 (MQ=255) tCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACgg < 1:2154693/100‑1 (MQ=255) tCGACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACgg < 2:1549296/100‑1 (MQ=255) tCGACACTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACgg < 1:3716825/100‑1 (MQ=255) gACATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTa < 1:344928/100‑1 (MQ=255) cATTGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTAtt > 1:2158717/1‑100 (MQ=255) ttcccAACGCGTCAGGCATTAAAAAGCCCTTTTACATTAATGGTCAGTCCGTTAAAGATGACCCCGATTTGTCTATTTCTCTCGGTGCAGACGGTAttta < 2:5441053/97‑3 (MQ=255) ttGCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGa > 2:3034821/1‑100 (MQ=255) gCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc < 2:3636918/100‑1 (MQ=255) gCCAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc < 1:3373/100‑1 (MQ=255) gCCAACGCGGCAGGCAGTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAAc > 2:5326213/1‑100 (MQ=255) ccAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACg > 2:2525668/1‑100 (MQ=255) ccAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACg < 1:2061412/100‑1 (MQ=255) ccAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACg < 2:4087834/100‑1 (MQ=255) ccAACGCGGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACg < 1:939079/100‑1 (MQ=255) aaCGCGGCGGGTATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCa < 2:2669607/100‑1 (MQ=255) cgcgGCAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCaac > 2:1809903/1‑99 (MQ=255) cAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGa < 1:5253341/100‑1 (MQ=255) cAGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGa < 1:4028337/100‑1 (MQ=255) aGGCATTCAAAAGCCCTTTCAAAGTAACGGTCAGGACGTGGAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCCAACTGGaa < 2:5453292/100‑1 (MQ=255) aGGCATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGTCCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGaa < 2:683760/100‑1 (MQ=255) | AAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGAA > NC_000913/618909‑619102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |