| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,539,359 | G→T | P1078T (CCA→ACA) | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,539,359 | 0 | G | T | 97.2% | 600.2 / 3.4 | 179 | P1078T (CCA→ACA) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (4/1); new base T (96/78); total (100/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
GAGCGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGGCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACGGATGATCCT > NC_000913/1539261‑1539454 | gagCGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGGc > 2:2294460/1‑100 (MQ=255) gCGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCgg > 1:4603626/1‑100 (MQ=255) cGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGt < 1:505986/100‑1 (MQ=255) cGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGt < 1:5188761/100‑1 (MQ=255) tCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTAt > 2:5222992/1‑100 (MQ=255) cAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATc < 1:4340748/100‑1 (MQ=255) aGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCt < 1:4519734/100‑1 (MQ=255) gCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTg > 1:1236701/1‑100 (MQ=255) gCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTg > 2:5301645/1‑100 (MQ=255) aTTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGgc > 1:107575/1‑100 (MQ=255) aGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCa > 1:1535807/1‑100 (MQ=255) aGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCa > 1:463573/1‑100 (MQ=255) aGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCa < 1:300338/100‑1 (MQ=255) gCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAt > 1:476040/1‑100 (MQ=255) gCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAt > 2:2093531/1‑100 (MQ=255) cAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAtc < 2:3981748/100‑1 (MQ=255) cAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAtc < 2:2009811/100‑1 (MQ=255) aGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAtct > 1:4242670/1‑100 (MQ=255) aGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAtct > 1:2435453/1‑100 (MQ=255) ggTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCAtctc > 2:2797267/1‑100 (MQ=255) ttttCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCAc > 1:881912/1‑100 (MQ=255) ttttCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCAc < 2:1513226/100‑1 (MQ=255) tcttCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCAc < 2:1200000/98‑1 (MQ=255) ttCACTGTAGGTTGAGTGAATGCCCCAGTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTg < 1:426664/100‑1 (MQ=255) aCTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACg > 2:461948/1‑100 (MQ=255) aCTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACg < 1:3398549/100‑1 (MQ=255) aCTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACg < 1:2530509/100‑1 (MQ=255) aCTGTAGGTTGAGTGAATGACCCATTTCTGGTGCGGCGTCAGGAACTTAAGTGCCTTTTCCGGGAAGCCGTTCGTCGGTGTCTGGAGCATCTCCGTGACg > 2:5032577/1‑100 (MQ=25) cTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGc > 1:614777/1‑100 (MQ=255) cTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGc > 2:384152/1‑100 (MQ=255) tGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCt < 2:1119590/100‑1 (MQ=255) tGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCt > 1:1276112/1‑100 (MQ=255) gTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTa > 1:1997965/1‑100 (MQ=255) tAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTAc < 1:3919753/100‑1 (MQ=255) tAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTAc < 1:2441480/100‑1 (MQ=255) tAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGGCGGTATCTGGCGCATCTCACTGACGCTAc > 1:2150311/1‑100 (MQ=255) aGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACg > 2:1951130/1‑100 (MQ=255) ggTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACgg > 2:4897870/1‑100 (MQ=255) ggTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACgg > 1:5462918/1‑100 (MQ=255) ggTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACgg > 1:4677147/1‑100 (MQ=255) ggTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACgg > 2:3441544/1‑100 (MQ=255) gTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACggg > 2:1374119/1‑100 (MQ=255) gagtgagtGCCCCAGTTGTGGTGCTGCGCCATGTTGTTAAGTGCTTTTTCCGGGAAGCCGATTGTCGGTATCTGGCGCATGTCACTGACGCTACGGgggt > 2:1231010/1‑100 (MQ=255) gAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGgtgt > 1:1093401/1‑100 (MQ=255) aGTGAATGCACCATTTCTGGTGCGGCGTCAGCAAGTTAAGTGATTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGCCGCTACGGGTGTc < 2:3898262/100‑1 (MQ=38) tGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCATTTTCCGGGAAGAAGTTTGTCGGTATCTGGCGCATCTCACTGACCCTAAGGGTGTCGa > 2:5246441/1‑100 (MQ=38) gAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGAt < 2:107672/100‑1 (MQ=255) gAATGCCACATTTCTGGTGCGGCGGCAGAAAGGTAAGTGCTATTTCGGGGAAGACGTGGGTGGGAATAGGGCGCATGTGCCTGGGGCTACGGgtgggtct > 2:4625023/1‑95 (MQ=255) aaTGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATa < 1:3624850/100‑1 (MQ=255) aTGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAg > 2:4387111/1‑100 (MQ=255) gCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTGGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggc > 2:2739904/1‑100 (MQ=255) gCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggc < 1:3448999/100‑1 (MQ=255) ccccATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcg > 1:5502333/1‑100 (MQ=255) cccATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgg < 1:2871021/100‑1 (MQ=255) cATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggc < 2:3468016/100‑1 (MQ=255) cATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggc < 1:4568153/100‑1 (MQ=255) cATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggc < 1:3331123/100‑1 (MQ=255) cATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggc < 2:4932618/100‑1 (MQ=255) cATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggc < 2:712175/100‑1 (MQ=255) aTTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGAAAGCCGTTTGTCGATATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAggcgggcg > 2:5157619/1‑100 (MQ=39) tCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTTGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGTGCGATa < 2:2207173/100‑1 (MQ=255) tCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATa > 1:2707438/1‑100 (MQ=255) cTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATaa < 2:2826825/100‑1 (MQ=255) tGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAg < 1:148079/100‑1 (MQ=255) ggTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGc > 1:71081/1‑100 (MQ=255) tGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGcca > 2:2973937/1‑100 (MQ=255) gTCAGGAAGTTAAGTTCTTTTTCCGGGCAGCCGTCTGTCGGCATCTGGCGCATCTCACGAACGCTACGGGGGTCGATAGGCGGACGATTAGCGACCAGGc < 2:419759/100‑1 (MQ=255) gTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGc > 2:1733913/1‑100 (MQ=255) gTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGc > 1:4927286/1‑100 (MQ=255) cAGGAAGTTAAGTGCTTTTTTTTTTTTTCTGTTTGTCGGTATCTGGCACATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATCCGCCACCAGGcgt > 2:3800529/1‑98 (MQ=255) cAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCtt < 1:1409616/100‑1 (MQ=255) cAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCtt > 1:5501385/1‑100 (MQ=255) aGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCttt > 2:3921505/1‑100 (MQ=255) ngAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTc > 1:410373/2‑100 (MQ=255) ggAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTc < 1:2768188/100‑1 (MQ=255) ggAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTc > 2:1199836/1‑100 (MQ=255) ggAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTc > 1:73477/1‑100 (MQ=255) gAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCa < 1:5291329/100‑1 (MQ=255) atcttGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCaaa < 2:4350997/96‑1 (MQ=255) aaGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGATTTAACAaaaa < 2:26467/100‑1 (MQ=255) aGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAg > 1:671463/1‑100 (MQ=255) aGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAg > 1:810425/1‑100 (MQ=255) aGTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAg > 1:1672335/1‑100 (MQ=255) gTGCTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGc > 1:1263794/1‑100 (MQ=255) cTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCTCATCTCACTGACGCTACGGGTGTCGATCGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACg > 2:2073029/1‑100 (MQ=38) cTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACg > 1:3386650/1‑100 (MQ=255) cTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACg < 2:76056/100‑1 (MQ=255) cTTTTTCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACg < 1:3795158/100‑1 (MQ=255) tttttCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGc < 1:1216000/100‑1 (MQ=255) ttttCCGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCa < 2:559768/100‑1 (MQ=255) ttttCCGGGAAGCCGTTTGTCGGTAGCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCa < 1:1819723/100‑1 (MQ=255) ttctCCGGGAAGCCGTTTGTGGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACTAACAGCACGCa < 2:3408518/97‑1 (MQ=255) tttCCGGGAAGCCGTTTNTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCACAAGCACGCAt > 1:304844/1‑100 (MQ=255) cGGGAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCAc > 2:4499180/1‑100 (MQ=255) gggAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACg < 2:458494/100‑1 (MQ=255) ggAAGCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACgn < 1:4428592/100‑2 (MQ=255) gCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACGgatga < 1:3534966/100‑1 (MQ=255) gCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACGgatga > 1:1181226/1‑100 (MQ=255) gCCGTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACACATCCACGgatga < 2:3036009/100‑1 (MQ=255) gTTTGTCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACGGATGATcc < 1:285006/100‑1 (MQ=255) | GAGCGTCAGCATTAGCAGGTTTTCACTGTAGGTTGAGTGAATGCCCCATTTCTGGTGCGGCGTCAGGAAGTTAAGTGCTTTTTCCGGGAAGCCGTTTGGCGGTATCTGGCGCATCTCACTGACGCTACGGGTGTCGATAGGCGGGCGATAAGCCACCAGGCTTTCACCAAAAGCACGCATCCACGGATGATCCT > NC_000913/1539261‑1539454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |