Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,292,989 IS1 (+) +8 bp intergenic (‑67/‑531) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 291401NA (NA)176 (0.890) 104/196 0.3 99.4% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1292996 1 (0.010)intergenic (‑74/‑531) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 1050545NA (NA)189 (0.950) 99/196 0.5 99.4% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1292989 = 1 (0.010)intergenic (‑67/‑538) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

Only 100 of 176 total aligned reads displayed.

GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG  <  NC_000913/1292996‑1292899
                                                                                                                                                                                                  
GTAGCTGAACAGGAGGGACAGCTGATAGAGACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTc                                                                                                 >  2:4244426/1‑98
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA                                                                                                 <  2:737743/99‑1
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA                                                                                                 >  1:1249661/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA                                                                                                 <  2:693522/99‑1
 TAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTAT                                                                                                <  1:4788302/99‑1
 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTAT                                                                                                >  2:4473110/1‑99
   GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTG                                                                                              >  2:3698297/1‑99
    CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC                                                                                             >  1:65658/1‑99
    CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC                                                                                             <  1:1708728/99‑1
    CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC                                                                                             >  2:2604874/1‑99
    CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC                                                                                             >  1:231144/1‑99
     TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA                                                                                            <  2:3997896/99‑1
     TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA                                                                                            >  2:439412/1‑99
         CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAAC                                                                                        >  2:797815/1‑99
            GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGA                                                                                     >  1:2792470/1‑99
               GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATT                                                                                  >  1:2908379/1‑99
                  CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAA                                                                               <  1:3919911/99‑1
                   AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAG                                                                              <  1:2537921/99‑1
                    GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGG                                                                             <  1:326354/99‑1
                    GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGG                                                                             <  1:4216945/99‑1
                       GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGAATTTAAGGCTC                                                                          >  2:3665524/1‑99
                       GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTC                                                                          <  2:1146781/99‑1
                        ATAGAAACAGACGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCT                                                                         >  2:4889618/1‑99
                         TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA                                                                        >  2:651377/1‑99
                         TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA                                                                        <  1:815794/99‑1
                          AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTAT                                                                       >  1:2055812/1‑99
                          AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTAT                                                                       >  1:2598199/1‑99
                           GAAACAGAAGCCACTGGAGCACCTCCAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATT                                                                      >  2:4552715/1‑99
                           GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATT                                                                      >  1:3765207/1‑99
                            AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTA                                                                     >  1:4369590/1‑99
                             AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                    >  1:3922458/1‑99
                             AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                    >  1:405730/1‑99
                              ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATT                                                                   <  2:3816311/99‑1
                               CAGAAGCCACTGGAGCGCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTA                                                                  <  1:726078/99‑1
                               CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTA                                                                  <  1:3186268/99‑1
                                 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACC                                                                >  2:4222080/1‑99
                                  AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCT                                                               >  2:2452623/1‑99
                                   AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGAATTTAAGGCTCTATTATTACCTC                                                              >  2:219521/1‑99
                                   AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTC                                                              <  1:2197080/99‑1
                                     CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAA                                                            >  2:2086446/1‑99
                                      CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAC                                                           <  1:4900311/99‑1
                                      CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAC                                                           <  2:2885496/99‑1
                                       ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACA                                                          >  2:3223811/1‑99
                                       ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACA                                                          >  1:661694/1‑99
                                        CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAA                                                         >  2:2454781/1‑99
                                         TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAA                                                        <  1:24130/99‑1
                                          GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                       <  1:2495670/99‑1
                                          GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                       <  2:1068613/99‑1
                                          GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                       <  1:653053/99‑1
                                          GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                       <  2:50314/99‑1
                                          GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                       <  2:4155907/99‑1
                                           GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACC                                                      >  1:925049/1‑99
                                           GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACC                                                      >  2:2659882/1‑99
                                              CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACC                                                   >  1:2335435/1‑99
                                               tCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC                                                  <  2:2209120/98‑1
                                               ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC                                                  <  1:3538017/99‑1
                                                  TCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA                                               <  2:1535663/99‑1
                                                  TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA                                               <  1:3066621/99‑1
                                                  TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA                                               >  1:401999/1‑99
                                                  TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA                                               >  2:1744646/1‑99
                                                  TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA                                               <  2:1801288/99‑1
                                                   CAACAACACCATCATACACTAAATCAGTAAGTTAGCAGCATCACCCTATCGCACAACTGAATTTAAGGCTCTATTCTTACCTCAACAAACCACCCCAAT                                              <  2:2780951/99‑1
                                                    AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATA                                             >  1:1043851/1‑99
                                                    AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATA                                             >  1:1143613/1‑99
                                                     AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATAT                                            <  2:2745453/99‑1
                                                      AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATA                                           >  2:2993041/1‑99
                                                       AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAA                                          <  2:963896/99‑1
                                                       AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAA                                          <  1:5119092/99‑1
                                                        ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAG                                         >  2:3192784/1‑99
                                                           CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                      <  2:1204721/99‑1
                                                            CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG                                     >  1:3594149/1‑99
                                                            CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG                                     >  1:1393869/1‑99
                                                            CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG                                     >  2:4536964/1‑99
                                                            CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATATAATGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG                                     >  2:4745790/1‑99
                                                              TCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAG                                   <  2:2731618/99‑1
                                                              TCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAG                                   <  1:1024843/99‑1
                                                                  ACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTA                               <  1:2385677/99‑1
                                                                    ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT                             >  2:1457428/1‑99
                                                                    ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT                             >  2:1634692/1‑99
                                                                     CTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTA                            <  2:1221683/99‑1
                                                                     CTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACAACCCCAATATAAGTTTGAGATTACTA                            >  2:3789549/1‑99
                                                                       AAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACA                          <  2:2301749/99‑1
                                                                        AATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAA                         >  1:3557502/1‑99
                                                                         ATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT                        <  1:265367/99‑1
                                                                            AGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAG                     <  1:2226486/99‑1
                                                                              TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG                   >  1:3438172/1‑99
                                                                                AGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA                 >  1:4660986/1‑99
                                                                                 GTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAG                >  1:3409383/1‑99
                                                                                 GTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAG                >  1:1547015/1‑99
                                                                                  TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC               >  1:4137195/1‑99
                                                                                  TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC               <  1:4538101/99‑1
                                                                                   TGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCA              <  1:4967735/99‑1
                                                                                         CATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAA        >  1:128785/1‑99
                                                                                            CACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATT     <  1:993628/99‑1
                                                                                            CACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATT     >  1:584330/1‑99
                                                                                             ACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCAAATATAAGTTTGAAATTACTACAATGAGCGAAGCAAATAAAATTC    >  2:885911/1‑99
                                                                                              CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT   <  2:4538763/99‑1
                                                                                              CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT   >  2:4573888/1‑99
                                                                                               CCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG  <  2:2308147/99‑1
                                                                                               CCTATTGCACAACCGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG  >  1:2640625/1‑99
                                                                                                                                                                                                  
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG  <  NC_000913/1292996‑1292899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.