Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908–258675 258683 9–776 119 [0] [2] 122 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)108 (0.790) 70/180 0.9 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

Only 100 of 122 total aligned reads displayed.

GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGC  >  NC_000913/258586‑258782
                                                                                                  |                                                                                                  
atcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa                                                                                                    >  1:662131‑M2/99‑99 (MQ=255)
atcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa                                                                                                    <  1:1705522‑M2/1‑1 (MQ=255)
 tcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg                                                                                                   <  1:825381‑M2/2‑1 (MQ=255)
  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgctcaaaaaatttcccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                  <  2:3304833‑M2/3‑1 (MQ=255)
  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                  >  1:2996308‑M2/97‑99 (MQ=255)
  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                  >  2:3182838‑M2/97‑99 (MQ=255)
  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                  <  1:2493679‑M2/3‑1 (MQ=255)
   acaacaggagatagcaatgacgttaccgtgtggacacccgaagagcagattgatcaataaatttaccgcactaggcccgtatattcgtgaaggtaAGTg                                                                                                 <  2:20213‑M2/4‑1 (MQ=255)
    caacaggagatagcaatgacgttaccgagtggacacacgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc                                                                                                <  2:1041411‑M2/5‑1 (MQ=255)
       caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa                                                                                             <  1:445184‑M2/8‑1 (MQ=255)
       caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa                                                                                             <  1:831713‑M2/8‑1 (MQ=255)
       caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa                                                                                             <  2:1466667‑M2/8‑1 (MQ=255)
        aggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg                                                                                            <  1:2226143‑M2/9‑1 (MQ=255)
          gagatagcaatgacgttaccgagtggacacccgaagagcggattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt                                                                                          >  2:3625401‑M2/89‑99 (MQ=255)
            gatagcaatgacgttaccgagtggacaccggaagagaaaaaaaaaaaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa                                                                                        <  2:2799492‑M2/13‑1 (MQ=255)
            gatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa                                                                                        >  2:2475252‑M2/87‑99 (MQ=255)
             atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                       <  1:2192524‑M2/14‑1 (MQ=255)
             atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                       <  1:3736579‑M2/14‑1 (MQ=255)
             atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                       <  1:3527036‑M2/14‑1 (MQ=255)
             atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                       >  1:3281067‑M2/86‑99 (MQ=255)
                gcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa                                                                                    <  1:2371695‑M2/17‑1 (MQ=255)
                gcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa                                                                                    <  1:3579830‑M2/17‑1 (MQ=255)
                 caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcatattcctgcaggtaAGTGCAAAGATAATCGAt                                                                                   >  2:2933517‑M2/82‑99 (MQ=255)
                  aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt                                                                                  >  1:75799‑M2/81‑99 (MQ=255)
                  aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt                                                                                  <  1:3938007‑M2/19‑1 (MQ=255)
                   atgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaACTGCAAGGATAATCGATTc                                                                                 <  2:1303948‑M2/20‑1 (MQ=255)
                   atgacgttaccgagcggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAATGCAAAGATAATCGATTc                                                                                 <  2:3510310‑M2/20‑1 (MQ=255)
                      acgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttt                                                                              >  1:2932711‑M2/77‑99 (MQ=255)
                        gttaccgagtggacacccgaagagcagattgatcaaaaaattttccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                            <  2:2836542‑M2/25‑1 (MQ=255)
                        gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                            <  1:1108890‑M2/25‑1 (MQ=255)
                        gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                            <  1:1301155‑M2/25‑1 (MQ=255)
                         ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc                                                                           <  1:2960344‑M2/26‑1 (MQ=255)
                          taccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTCCg                                                                          <  1:478031‑M2/27‑1 (MQ=255)
                          taccgagtggacacccgaagagaaaattgaaaaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCg                                                                          <  2:1159225‑M2/27‑1 (MQ=255)
                           accgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                         <  2:398538‑M2/28‑1 (MQ=255)
                             cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt                                                                       >  1:1772249‑M2/70‑99 (MQ=255)
                             cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt                                                                       <  2:642520‑M2/30‑1 (MQ=255)
                             cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt                                                                       <  1:2716834‑M2/30‑1 (MQ=255)
                               agtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt                                                                     <  2:1224791‑M2/32‑1 (MQ=255)
                                   gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                 >  1:2812852‑M2/64‑99 (MQ=255)
                                   gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                 <  1:2506741‑M2/36‑1 (MQ=255)
                                   gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                 >  2:3440204‑M2/64‑99 (MQ=255)
                                    acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGc                                                                >  1:556554‑M2/63‑99 (MQ=255)
                                    acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTCTTCGATTGTCTGGc                                                                >  2:1654592‑M2/63‑99 (MQ=255)
                                     cacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt                                                               <  2:3647449‑M2/38‑1 (MQ=255)
                                        ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtctattcgacaaggtaCGTCCACAGATAATCGATTCTTTTTCGCTTGTCTAACTGTa                                                            >  2:2365881‑M2/59‑99 (MQ=255)
                                        ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa                                                            <  2:1753601‑M2/41‑1 (MQ=255)
                                        ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTCGATTGTCTGGCTGTAt                                                           <  2:2868925‑M2/41‑1 (MQ=255)
                                         cgaagagcagattgatcaacaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt                                                           <  2:3432223‑M2/42‑1 (MQ=255)
                                         cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgttaaggtaAGTGCAAAGATAATCGATTCTGTTTCGATTGTCTGGCTGTAt                                                           <  1:1589356‑M2/42‑1 (MQ=255)
                                         cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt                                                           <  1:2504401‑M2/42‑1 (MQ=255)
                                           aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                         <  2:2331485‑M2/44‑1 (MQ=255)
                                           aagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                         <  2:3138460‑M2/44‑1 (MQ=255)
                                                cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTACAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCaa                                                    >  2:3414317‑M2/51‑99 (MQ=255)
                                                 agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                   <  2:3399200‑M2/50‑1 (MQ=255)
                                                 agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                   <  1:3328630‑M2/50‑1 (MQ=255)
                                                 agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                   >  1:3472809‑M2/50‑99 (MQ=255)
                                                   attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCAATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGt                                                 <  2:2208667‑M2/52‑1 (MQ=255)
                                                    ttgatcaaaaaatttaccgcactaggcccgtatatgcgtaaaggtaAGAGCAAAGATAATCGATTCTTATTCGATTGTCTGGCTGTATGCGTGAACGTg                                                >  2:3615608‑M2/47‑99 (MQ=255)
                                                       atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaaa                                             >  1:3828329‑M2/44‑99 (MQ=255)
                                                        tcaaaaaatttaccgcactaggcccgtatattcgttaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAc                                            <  2:2687157‑M2/57‑1 (MQ=255)
                                                        tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAc                                            >  1:1054747‑M2/43‑99 (MQ=255)
                                                         caaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAcc                                           <  2:1743378‑M2/58‑1 (MQ=255)
                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCg                                          >  2:79289‑M2/41‑99 (MQ=255)
                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCg                                          >  1:2286967‑M2/41‑99 (MQ=255)
                                                           aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCgg                                         >  1:3259004‑M2/40‑99 (MQ=255)
                                                            aaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGc                                        >  1:1507671‑M2/39‑99 (MQ=255)
                                                              aatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAc                                      <  1:2094358‑M2/63‑1 (MQ=255)
                                                                   accgcactaggcccgtatattcgtgaaggtcAGTGCAAAGATATTCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCTCCGGaa                                 <  2:1449609‑M2/68‑1 (MQ=255)
                                                                     cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGt                               <  1:2440300‑M2/70‑1 (MQ=255)
                                                                      gcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTg                              <  1:3145426‑M2/71‑1 (MQ=255)
                                                                       cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGc                             >  1:2124414‑M2/28‑99 (MQ=255)
                                                                        actaggcccggatattcgtgaaggtaAGTGCAAAGATAGTCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCg                            >  1:3943143‑M2/27‑99 (MQ=255)
                                                                         ctaggcccgtatattcgtgaaggtaAGTGCAAAGTTAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGAAGTGCGt                           <  2:838763‑M2/74‑1 (MQ=255)
                                                                         ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                           <  2:136396‑M2/74‑1 (MQ=255)
                                                                         ctaggcccatatattcgtgaaggcaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCCACGTGAAACCGCCACCGGAAGTGCGt                           <  2:839848‑M2/74‑1 (MQ=255)
                                                                          taggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACGGGCACCGGAAGTGCGTg                          >  2:448245‑M2/25‑99 (MQ=255)
                                                                             gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAt                       >  1:2167106‑M2/22‑99 (MQ=255)
                                                                               ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTc                     >  1:3764771‑M2/20‑99 (MQ=255)
                                                                               ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTc                     >  1:1458817‑M2/20‑99 (MQ=255)
                                                                                 gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                   <  2:3241883‑M2/82‑1 (MQ=255)
                                                                                 gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                   <  2:581896‑M2/82‑1 (MQ=255)
                                                                                 gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                   <  1:2258029‑M2/82‑1 (MQ=255)
                                                                                 gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                   <  1:3737378‑M2/82‑1 (MQ=255)
                                                                                  tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                  <  1:81393‑M2/83‑1 (MQ=255)
                                                                                  tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                  <  2:435916‑M2/83‑1 (MQ=255)
                                                                                  tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                  <  1:3742255‑M2/83‑1 (MQ=255)
                                                                                    tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTTTTTTTTTTTGCTGTATGAGTCAACGTTAAACCGGCACCGGAAGTGCGTGTATTCTgggg                >  2:1579985‑M2/15‑99 (MQ=255)
                                                                                    tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                <  2:651062‑M2/85‑1 (MQ=255)
                                                                                    tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                >  1:1855627‑M2/15‑99 (MQ=255)
                                                                                         gtGAAGGTAAGTGCAAATATAATCGATGCTTTTTCGATTGTCGGGCTGTATGGGTCAACGTGAGACCGGCACCGGAAGTGTGTGAATTCTGGGGCtggg           <  2:1151582/98‑2 (MQ=255)
                                                                                         gtGAAGGTAAGTGCAAAGATAATCGATACTTTTTCGATTGTCTGGCTGTATGCGTTAACGTGACCCCGTCACCGTTAGTGCGTGAATTCTGGGGCtggt           <  2:36003/98‑1 (MQ=255)
                                                                                           gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg         >  2:2237175‑M2/8‑99 (MQ=255)
                                                                                            aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga        <  1:2495697‑M2/93‑1 (MQ=255)
                                                                                             aggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat       >  1:3941758‑M2/6‑99 (MQ=255)
                                                                                             aggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat       <  2:1074730‑M2/94‑1 (MQ=255)
                                                                                             aggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat       <  1:1672252‑M2/94‑1 (MQ=255)
                                                                                              ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg      <  1:659525‑M2/95‑1 (MQ=255)
                                                                                               gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgg     <  1:3421680‑M2/96‑1 (MQ=255)
                                                                                                 aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAg   >  1:3117130‑M2/2‑99 (MQ=255)
                                                                                                  |                                                                                                  
GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGC  >  NC_000913/258586‑258782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: