| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,224,288 | IS5 (+) +4 bp | coding (580‑583/933 nt) | pbpG ← | D‑alanyl‑D‑alanine endopeptidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 224 (1.150) | 103/194 | 0.3 | 97.3% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2224288 = | 6 (0.030) | coding (583/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase | |||||
| * | ? | NC_000913 | = 2224291 | 6 (0.030) | 199 (1.010) | 100/196 | 0.4 | 97.0% | coding (580/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 445 total aligned reads displayed.
AATATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAA > NC_000913/2224190‑2224386 | gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct < 2:3157333‑M2/1‑1 (MQ=255)aaTATTCCAGTTATCACGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACt > 1:4612361/1‑99 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt < 2:1697273‑M2/2‑1 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt < 1:2405219‑M2/2‑1 (MQ=255) attcaaggaatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagcattaccccgcttattcgcaccttactt < 2:2041673‑M2/2‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa > 2:834911‑M2/97‑99 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa > 2:4003869‑M2/97‑99 (MQ=255) tcaatgcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTaa > 2:4544554‑M2/96‑99 (MQ=255) tCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAgg > 1:368312‑M1/1‑97 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACt > 2:606107‑M2/94‑99 (MQ=255) cAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaa > 1:4049534‑M1/1‑95 (MQ=255) ttATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggt < 2:1442900‑M1/99‑8 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCg > 1:3104461‑M2/89‑99 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCg > 1:4186301‑M2/89‑99 (MQ=255) aTCGCGATACACCAGATGTTTAGTATTGTGGAATGGCAGCGTATTCGTTGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgc < 1:3031783‑M1/99‑10 (MQ=255) tCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcg < 2:1383100‑M1/99‑11 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAAc < 1:4739016‑M2/17‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAAc < 2:4218021‑M2/17‑1 (MQ=255) gATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaaca > 2:2416397‑M1/1‑85 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGa > 2:4344910‑M2/80‑99 (MQ=255) acaaaaaatcggctcaaacatgaagaaatgaaatgactgagtccgccgagaagaatttcaccgcttattcgcaccttccTTAACTGCCCGATCAACGGa < 2:2322404‑M2/20‑1 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttaatcgcaccttccTTAACTACCAGATCAACGGata > 1:1193786‑M2/78‑99 (MQ=255) acCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtcc > 2:3865970‑M1/1‑80 (MQ=255) aaaatcggctccaacatgaagatatgaagtgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATAtt < 1:4794378‑M2/24‑1 (MQ=255) cAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccct > 2:3445770‑M1/1‑78 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGt < 1:508678‑M2/26‑1 (MQ=255) aGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctg > 1:322831‑M1/1‑77 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGttt > 1:524591‑M2/72‑99 (MQ=255) tgatTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgata < 1:669471‑M1/99‑26 (MQ=255) gatTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatat < 1:2458602‑M1/99‑27 (MQ=255) ttAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatga < 2:186435‑M1/99‑29 (MQ=255) ttAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatga < 1:1222899‑M1/99‑29 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTgg > 2:2960659‑M2/67‑99 (MQ=255) aGTATTGCGGAACGGCAGCGTATACGTCGGATTAGATAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgaga < 1:3425652‑M1/99‑31 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc < 1:4817257‑M1/99‑33 (MQ=255) tATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatc > 2:728906‑M1/1‑67 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCaa < 2:4976995‑M2/36‑1 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCACGATCAACGGATATTGTTTGCTGGCaa > 1:2095020‑M2/64‑99 (MQ=255) aTTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatca < 1:2723725‑M1/99‑34 (MQ=255) ttGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcat < 1:3823794‑M1/99‑35 (MQ=255) ttGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcat > 1:3058951‑M1/1‑65 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGa < 2:1624362‑M2/39‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAg < 2:4656169‑M2/40‑1 (MQ=255) gCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 1:1031156‑M1/99‑37 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGc > 1:3149871‑M2/59‑99 (MQ=255) cGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 2:3755638‑M1/99‑38 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCa > 1:101816‑M2/58‑99 (MQ=255) gAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgtgaacaagtccctgatatgagatcatgtttg < 1:4229582‑M1/99‑40 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGt > 1:4879739‑M2/56‑99 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGtt > 1:3259090‑M2/55‑99 (MQ=255) aCGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 2:2463070‑M1/1‑58 (MQ=255) atgaaatgcctgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTg < 2:2540215‑M2/47‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTg < 2:2733514‑M2/47‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTg < 1:2694960‑M2/47‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTg < 2:3535914‑M2/47‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTg < 2:4133724‑M2/47‑1 (MQ=255) gaaatgactaaggcagccgagaaaaagttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGATCAGTTTTGt < 2:4749942‑M2/49‑1 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGtt > 1:395846‑M2/50‑99 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTATTTGCTGGCAATGAGCAGTTTGGtt > 1:3347554‑M2/50‑99 (MQ=255) cGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:1956607‑M1/99‑49 (MQ=255) cGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:4987619‑M1/99‑49 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTaa < 2:3354492‑M2/52‑1 (MQ=255) atgactgagtcagcagagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTaa < 1:540224‑M2/52‑1 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAg < 2:2872919‑M2/53‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTc > 1:205396‑M2/45‑99 (MQ=255) gTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:3588475‑M1/1‑44 (MQ=255) gTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:1401179‑M1/1‑44 (MQ=255) gTCGGATTAGAGAAGGTTGCCATATCATCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatttggagccatag > 1:4649220‑M1/1‑44 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACgg > 2:3789029‑M2/41‑99 (MQ=255) tCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 1:2595228‑M1/1‑43 (MQ=255) acgGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAgaaaagtacgaacaagtccctgatatgagatcatgtttgtcatctggagccataga > 2:1000044‑M1/2‑43 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGc > 1:175581‑M2/39‑99 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGc > 1:5033299‑M2/39‑99 (MQ=255) ttAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 2:3009936‑M1/99‑62 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTACCTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGtt < 1:1131483‑M2/65‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGtt < 2:2798085‑M2/65‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGtt > 1:5209515‑M2/35‑99 (MQ=255) tAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:2619795‑M1/99‑63 (MQ=255) tAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:4325523‑M1/99‑63 (MQ=255) cgagaagaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTg < 2:2661087‑M2/66‑1 (MQ=255) gagaAGGTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt > 2:3615571‑M1/1‑35 (MQ=255) agaAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGaaa < 2:158757/99‑1 (MQ=255) gaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGt > 1:4386793‑M2/28‑99 (MQ=255) gaatttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGt > 1:2844802‑M2/28‑99 (MQ=255) ggTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 1:861363‑M1/99‑70 (MQ=255) gTTGCCATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:1655016‑M1/1‑29 (MQ=255) tttccccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTAt < 2:1286229‑M2/75‑1 (MQ=255) ccATATCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:4868905‑M1/1‑25 (MQ=255) ccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCAcc > 1:1529065‑M2/20‑99 (MQ=255) ccgcttattcgcaccttccTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCAcc > 1:580436‑M2/20‑99 (MQ=255) atatCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca < 2:534726‑M1/99‑77 (MQ=255) atCTTCCCGGGTAGTACTTAAggaaggtgcgaacaagtccctgatttgagatcaggtttgtcatctggagccatagaacagggttcatcatgagtcatc > 2:1177199‑M1/1‑21 (MQ=255) cccGTGTAGTACTTAAggaaggtgcgaacgagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 2:1493157‑M1/99‑84 (MQ=255) cccGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 2:3943454‑M1/1‑16 (MQ=255) ccGGGTAGTACTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 2:2223373‑M1/1‑15 (MQ=255) cGGGTAGTACTTAAggacggtgcgaacaagtccctgatatgagatcatgcttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 2:2126826‑M1/1‑14 (MQ=255) gtaCTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:2263208‑M1/99‑92 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 2:1122949‑M1/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:2309469‑M1/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:2554068‑M1/99‑96 (MQ=255) | AATATTCCAGTTATCGCGATACACCAGATGATTAGTATTGCGGAACGGCAGCGTATACGTCGGATTAGAGAAGGTTGCCATATCTTCCCGGGTAGTACTTAACTGCCCGATCAACGGATATTGTTTGCTGGCAATGAGCAGTTTGGTTAAGTCACGGGCAGTTGAAACGTTATGCACCGACAATCCGGTAGGTTCAA > NC_000913/2224190‑2224386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |