| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 353266 = | 32 (0.790) | 6 (0.160) | 6/274 | 2.5 | 22.1% | coding (561/1887 nt) | prpE | propionate‑‑CoA ligase |
| ? | NC_000913 | 353394 = | 13 (0.350) | coding (689/1887 nt) | prpE | propionate‑‑CoA ligase | |||||
AAGTCAGGCGCAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTT > NC_000913/353251‑353539 | aaGTCAGGCGCAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCaa > 2:66838/1‑150 (MQ=255) tttcgttggattccagccacgccaccggtacccgcgcgccgatgtgttgatggcgcaacgacgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGa < 1:526430‑M2/10‑1 (MQ=255) tcgttggattCCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGaaa < 1:526430‑M1/140‑1 (MQ=255) cgcAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAAcct < 2:133554/150‑1 (MQ=255) cgcAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAAcct < 1:203749/150‑1 (MQ=255) cccagccacgccaccggtacccgcgcgccgatgtgttgatggcgcaacgccgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGAAACCTCCTGCAt < 2:408507‑M2/22‑1 (MQ=255) acgccaccggtacccgcgcgccgatgtgttgatggcgcaacgacgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGAAACCTCCTGCATTCTCTac < 2:412652‑M2/29‑1 (MQ=255) ccaccggtacccgcgcgccgatgtgttgatggcgcaacgacgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGAAACCTCCTGCATTCTCTacac < 1:566243‑M2/31‑1 (MQ=255) ccaccggtacccgcgcgccgatgtgttgatggcgcaacgacgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGAAACCTCCTGCATTCTCTACACt < 2:187288‑M2/32‑1 (MQ=255) atgtgttgatggcgcaacgacgcgaaatcgacatcccgcccgctgacgcgcgccattttcgccagcccgcgatccaccagcaaaacatggcgtggctggAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAAcc < 2:409191‑M2/52‑1 (MQ=255) tGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAgg < 1:474144/151‑1 (MQ=255) tGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAgg < 1:197134/151‑1 (MQ=255) ggCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAgg > 1:111084/1‑150 (MQ=255) cgTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGt < 2:482067/150‑1 (MQ=255) cgggATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATg < 1:529823/151‑1 (MQ=255) gcgcCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATg > 2:497088/1‑151 (MQ=255) cAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCa > 2:448707/1‑151 (MQ=255) cgGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAg > 1:49815/1‑151 (MQ=255) ggTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCg > 1:134864/1‑151 (MQ=255) aCCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGc < 1:400223/151‑1 (MQ=255) ctggAATCCAACGAAACCTCCTGCTTTCTCTACCCTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCttt < 2:135723‑M2/146‑1 (MQ=255) ctggAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCttt < 2:618586‑M2/146‑1 (MQ=255) | AAGTCAGGCGCAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTT > NC_000913/353251‑353539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |